SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05344
Pre Gene Modal
BGIBMGA002384
Annotation
cuticular_protein_glycine-rich_13_precursor_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 1.371 PlasmaMembrane   Reliability : 1.009
 

Sequence

CDS
ATGAAAACAGCGCTCTGCTTAGTTTTCCTGCTGGTAGCAGCAGCGGCTGCCAGTGAGAAGAAGACGACAGAAAGCAAAGCTGAACCCCTAGAGAAGAAATTGGACAAACGTGGTCTCCTGAACCTCGGGTATGGATACGGTATTGATGGTCTTGACGTTGGCTACATCGGACACGGACAAGGACTCGGAGGCGCCTACAACTACGTAGACGGAGGCTACTCCTCCGGCTACGGCCTCAACTTCGGTGGACATACCGACGTCACCAAGACCATCACCCTCGTCAAAGGCGTCCCTGTACCTTACGCCGTCGACAGACCCGTTCCATACCCAGTTGAGAAGCACGTGCCTTATCCCGTCAAGGTAGCCGTGCCCCAACCCTACGAGGTCGTCAAACACGTGCCATATCACGTGAAGGAGTACGTTAAGGTTCCCGTCCACGTTCCCGCGCCATACCCAGTCGAAAAGAAGGTGCCTTATCCCGTACACGTACCAGTTGACAGGCCTTACCCCGTCAAGGTGCTCGTGCCCCAGCCCTACCCAGTCGAGAAGCACGTCCCCTACCCCGTCAAGGTTCCAGTGCCCCAACCTTACCCCGTGGAGAAACACGTGCCATACCCCGTCGAAGTTAAGGTGCCCGTACCGCAGCCCTACCCCGTTGTGAAGCACGTCGGTGTCCCCGTCAAGGTGCCCGTCGACAGGCCCTACCCCGTGCATGTGCCTGCTCCTTACCCCGTCGAGAAGCCAGTGCCTTTTGCTGTCCCAGTTGAGAAGCCAGTGGCCTACCCCGTCCATGTTCCTGTCGACAGGCCTTACGCCGTGCACGTTGAGAAGCCCGTGGCCGTTCCCGTAAAGGTGCCAGTGCCCCAACCCTACCCCGTGTACAAGCACGTGCCGTACGCGGTCGACAGGCCAGTCGCCGTTCCCGTCAAAGTGCCCGTTGACAGGCCCTACCCCGTAACTGTTGAGAGGCACGTGCCCATAACAGTCGAGAAGCCAGTCCCGGTACCAGTGAAGGTTCCCTACCTCGTCAGCGACCACCACGACCATCACGACCACCACGACCATTACAGCCAACTCAGCTACGGCGGTTCGTACTACGGCCACTAA
Protein
MKTALCLVFLLVAAAAASEKKTTESKAEPLEKKLDKRGLLNLGYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSGYGLNFGGHTDVTKTITLVKGVPVPYAVDRPVPYPVEKHVPYPVKVAVPQPYEVVKHVPYHVKEYVKVPVHVPAPYPVEKKVPYPVHVPVDRPYPVKVLVPQPYPVEKHVPYPVKVPVPQPYPVEKHVPYPVEVKVPVPQPYPVVKHVGVPVKVPVDRPYPVHVPAPYPVEKPVPFAVPVEKPVAYPVHVPVDRPYAVHVEKPVAVPVKVPVPQPYPVYKHVPYAVDRPVAVPVKVPVDRPYPVTVERHVPITVEKPVPVPVKVPYLVSDHHDHHDHHDHYSQLSYGGSYYGH

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

SignalP
Position:   1 - 17,         Likelihood:  0.999206
 
 
Length:
368
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.03441
Exp number, first 60 AAs:
0.03292
Total prob of N-in:
0.00517
outside
1  -  368
 
 

Population Genetic Test Statistics

Pi
142.222206
Theta
163.019017
Tajima's D
-0.719758
CLR
202.435602
CSRT
0.195790210489476
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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