SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05342
Pre Gene Modal
BGIBMGA002385
Annotation
_putative_cuticle_protein_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 1.548
 

Sequence

CDS
ATGCTCGTGGCCGCCAGTCTGGTGGCTTTATTGGCCCTCGCTTACGCGGAAGAAGCCAAAAAAGCAGAAAAGGAAGTGGCAGTGACCGATAAGGAACCGGCGGCTGACGACAAGAAACACGAAAAGAGAGGGCTCTTGGACATCGGCTGGCACGGCGGCTTCGATGGTGGTTATGGAGGCGGTGGTTATGGAGGCGGCGGTCATTATGGCGGGCACGAGGAGGTCCACAAAACCGTAACTGTCGTTAAGAAAGTTCCCGTTCCCTACCCCGTCGAAAAGCACATCCCCTACCCGGTAGAAAAGAAAATCCCCTACCCCGTGAAAGTGCACGTTCCCCAACCCTACCCCGTTGTCAAACATGTCCCTTACCCAGTTAAAGAGATTGTCAAGGTACCAGTTCACGTACCGCAACCCTACCCAGTCGAAAAGAAGGTGCCTTACCCAGTACATGTCCCAGTCGACAGACCCGTCCCCGTCAAGGTATATGTGCCAGAACCTTACCCCGTTGAAAAGAAAGTTCATGTTCCAGTCGAAGTGCACGTGCCCGCTCCTTACCCAGTAGAGAAAAAAGTACCTTACCCCGTAAAGGTTCCCGTACATGTGCCTGCTCCTTACCCCGTATACAAAGAGGTACAAGTACCAGTAAAGGTCCATGTGGACAGACCCTACCCCGTGCATATTCCCAAACCAGTGCCTTACCCCGTCGAGAAGCCCGTCCCATACCCGGTAGAAAAACCAGTGCCCTACCCCGTTAAAGTACACGTTGACCGCCCAGTGCCCGTCCATGTCGAGAAGCCAGTTCCGTACCCCGTCAAGGTACCAGTGCCCGCCCCTTACCCCGTCGAGAAGCACATCCCGTACCCAGTAGAAAAGGCCGTGCCGTTCCCAGTTAACATCCCCGTCGACAGGCCATACCCAGTCCACATCGAGAAGCACGTGCCTGTGCACATTGAGAAGCCCGTACCGTACCCAGTTAAGGTACCGGTACCAATCGTCGTCAGCCACGAACATGGTCACGAACACGGTCACGACTTCGGTCATCATGGAGGCTATTAA
Protein
MLVAASLVALLALAYAEEAKKAEKEVAVTDKEPAADDKKHEKRGLLDIGWHGGFDGGYGGGGYGGGGHYGGHEEVHKTVTVVKKVPVPYPVEKHIPYPVEKKIPYPVKVHVPQPYPVVKHVPYPVKEIVKVPVHVPQPYPVEKKVPYPVHVPVDRPVPVKVYVPEPYPVEKKVHVPVEVHVPAPYPVEKKVPYPVKVPVHVPAPYPVYKEVQVPVKVHVDRPYPVHIPKPVPYPVEKPVPYPVEKPVPYPVKVHVDRPVPVHVEKPVPYPVKVPVPAPYPVEKHIPYPVEKAVPFPVNIPVDRPYPVHIEKHVPVHIEKPVPYPVKVPVPIVVSHEHGHEHGHDFGHHGGY

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

SignalP
Position:   1 - 16,         Likelihood:  0.994399
 
 
Length:
351
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0166
Exp number, first 60 AAs:
0.01599
Total prob of N-in:
0.00357
outside
1  -  351
 
 

Population Genetic Test Statistics

Pi
196.763831
Theta
177.36644
Tajima's D
0.356364
CLR
0.005558
CSRT
0.474176291185441
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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