SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05341
Pre Gene Modal
BGIBMGA002386
Annotation
cuticular_protein_glycine-rich_11_precursor_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 1.482
 

Sequence

CDS
ATGAGATTAATGAGATCGTCCTTACTCCTGGCTGTGGTTATAGGCCTGGCTGCAGCAGAGGAAAAGGCAGCGAAGGCTGAAGAACAACTAGAACCTAAGAAACAAGACAAGCGAGGACTGTCCGAGTACTATGGAAGCTACGACGAGCACGGAGGAGGCCACGAAGAACACGTGAAAACCATCACTGTTGTCAAAAAGGTTCCTGTGCCGTACCCCGTAGAAAAACACATACCAGTACCGGTGGAGAAAAACGTGCCCTACCCCGTTAAAGTACCGGTTCCACACCCGTACCCGGTGATAAAAACTGTTCACTTCCCGGTCAAAGAATACATCAAAGTGCCAGAGTACATTCCCAAGCCGTACCCGGTCACGAAACACGTACCCGTACCGGTCAAAGTGCACGTCGACAATCCGGTGCCTGTTAGAGTATACGAACACGTGCCAGTTCCAGTTGAAAAGGCCGTGCCGGTACCCGTCAAAGTTCCTGTACCGCACCCGTACCCAGTAGAAAAAAAAGTACCCTTCCCAGTTAAGGTTCCAGTGAAGGTTCACGTGCCGTACCCGGTAGAGAAGATCATCCACTACCCTGTGAAGGTACCAGTCGACAACCCCATCCCAGTTCATGTTGATAAACCAGTGCCGGTGCATATAGAGAAACCTGTACCCTATCCCGTAGAGAAGCCCGTCCCGTACCCAGTTAAAGTGCCCGTCGACCGCCCAGTGCCCGTACACGTGGAAAAGCCCGTACCGTACCCCGTGAAAGTACCGGTACCCGCACCATACCCTGTAGAAAAAGTAATACCGTATCCCGTTGAAAGGAAAGTGCCCATCCCCGTCAAAATTCCAGTCGACCGTCCCGTTCCTGTGCACATTGAAAAGCACGTGGCAGTCCATGTTGAGAAGCACGTGCCATATCCCGTGAAGATCGGAGTGCCGGTTTTCCACCACGAGGAGGAGCACCAGCACATCGGAAGCCATGACGACCATCACGGCTTCAAACAACACAACGACGACCATCACGGCTTCGAACAACACAACGACGACCATCATCATCACATTGAAGACCACCATCATCATTAA
Protein
MRLMRSSLLLAVVIGLAAAEEKAAKAEEQLEPKKQDKRGLSEYYGSYDEHGGGHEEHVKTITVVKKVPVPYPVEKHIPVPVEKNVPYPVKVPVPHPYPVIKTVHFPVKEYIKVPEYIPKPYPVTKHVPVPVKVHVDNPVPVRVYEHVPVPVEKAVPVPVKVPVPHPYPVEKKVPFPVKVPVKVHVPYPVEKIIHYPVKVPVDNPIPVHVDKPVPVHIEKPVPYPVEKPVPYPVKVPVDRPVPVHVEKPVPYPVKVPVPAPYPVEKVIPYPVERKVPIPVKIPVDRPVPVHIEKHVAVHVEKHVPYPVKIGVPVFHHEEEHQHIGSHDDHHGFKQHNDDHHGFEQHNDDHHHHIEDHHHH

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

SignalP
Position:   1 - 19,         Likelihood:  0.994918
 
 
Length:
359
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01334
Exp number, first 60 AAs:
0.01334
Total prob of N-in:
0.00432
outside
1  -  359
 
 

Population Genetic Test Statistics

Pi
154.327723
Theta
172.436851
Tajima's D
-0.681856
CLR
0.598964
CSRT
0.195540222988851
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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