Gene

KWMTBOMO05333

Pre Gene Modal

BGIBMGA002389

Annotation

PREDICTED:_mucin-2-like_[Amyelois_transitella]

Location

Bomo_Chr9(-):14702952-14706586      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.285

CDS

ATGGCTGGAAGTTACATTGTCAACGTGCCTAAATTGAAAGGTCGCGAAAACTTCGACGAGTGGGCGTTTGCAGCTGAACATTTTTTGATGTTGGAAGGTGTCGATATTCATAAGTTAGAATCATCAACCGATGCTAGTTCTATTGATGAAAGAAAAGCTAAAGCTAAACTTATTATGACAATTGACTCTTCAATTTATGTTCACATTAAAAACGAGCAAACAGTACAAGGTGTGTGGAAGCGTTTAAAAGCCCTGTACGATGACTGTGGCTTTACGCGTCGCATCAGTCTACTTCGTCAGCTAATATCAATTCGATTAGAAGATAGCGAATCAATGGAAGCATATGTAACGCAAATGGTCGACACTGCACAAAAACTTAAAGGTACGGGTTTTCAGATCACTGATGAGTGGATCGGTTCACTATTATTAGCGGGCCTAACAGATACATTTGCTCCTATGATAATGGCCATTGAACATTCTGGATTAGCCATCAGTACGGATGCCATCAAGTCAAAATTACTGGACATGAGTTCAGAAGTTGGCAACACTGCAACTAACAATGCCTTTTTGTCGAAAGTAAGTCAGATGATTCGTAATGGAAACAAAGTGAGCTTCGAAGAAGACGTTTGTTACATACGCAATCGACAGAATGTGCTGGTAGGAAAAGCAAACCTGGTGAATGGAGTCTATAAATTGGACATTAAGTCAGACAGTTTGTTCGCGTGCTCAGCCACAACTGTGACTAGTGAGATATGGCATCGAAGATTAGGACACATTAACAGTAGAAGCTTGAATATTATGAAGAATGGTGCTGTGGATGGGATATCATACATGGATAAAGCTGAAATTGATATGTCCAAGTGCATCATATGCTGTGAAGGAAAACAGTCAAGGTTGCCATTTTCACATAAAGGTACGAGAAGTGAAAATGTGCTTGAACTTGTTCATGCAGATGTCTGTGGACCCATGGAACAACCTTCTATTGGACTATCAAAGTATTTTTTGCTTTTTGTAGATGACTACAGTAGAATGGCATTTGTGTTTTTTCTCAAAGCCAAGAACCGAGTTTTCAAATATTTTAAAGAGTTCAAAACTCTGGTTGAGACACAGACAGGCAGAAAACTAAAAGCCTTAAGGACAGATAATGGTGGAGAGTTTTGTTCGCTAGAATTTGATGAGTTTTTGAAGAAAAATGGCATAGTACATCAAACAACAAACCCTCATACACCAGAACAGAATGGCCTGTGTGAAAGACTTAATAGAACTGTCGTGGAGAGAGCTCGGTGTCTTCTGTTTGAAGCAGGCCTAGATAAAAAGTTTTGGGCCGAAGCAATCAACACAGCAGTCTATTTACGAAATAGAACATTGGCAGCAGGACTTAGGAAAACACCTTATGAAATATGGAGTGGTAAAAAGCCAAATCTAAGTCATATACGGATATTTGGTAGTCCTGCAATGGTCCATGTCCCCAAAGCAAAGCGGACTAAATGGAACAAGAAGGCCAATGAACACATCCTGATTGGATACTCAGAGAGTACCAAAGGATACAGGCTGTACAATGTAAAAACAAAAAATATTACCACTAGCAGGGATGTTGTTATCATGGAGAAAATCAACGACACAGATATGATACAAGCAGTAGTGGAAGAAAAAGAAACTATTCCAAGTGAAGAAGGAATACAAAAATGTGCTGTGACAAGTGAAGATTCCACTTGTGACTCACTAAATAGCACATACATGACAGATGATGCTACATATGTACCAGATGATACCAGTACCACCAGCTCAGATGAATTCTGTGATAGTAAATCGAATCACAAGTCAGAAAATCTGCAGCCAATAATTAAGGTGGAAAAGAGGACTAGGAAGAAACCAGACTGGTATGGGTACAATAACATATGTCAGAGCAGTGAGGAGGTGGACGACAATCTTCTCACTTATGAGGATGTAATGAGAGGATCAGAACAAGAAGAATGGTCAAAAGCCATGAAAGAGGAAATACAATCTTTCCATCAGAATGATGCTTGGGAGTTAGTAGACAGACCCAGTGGTGAAAATATTGTGGCATGCAAATGGGTGTATAAAAAGAAACTTAACAGTGACAACTCAGTGAGATATAGGGCACGGTTGGTTGCGAAGGGTTTCAGCCAGAGACAGGGTATAGACTTTAAAGAAACTTTTTCCCCAGTGCTAAAATATTCCACTTTAAAACTGTTATTTGCTATTAGTGTTAACTTGAATCTTAGCATAACCCATTTGGATGTAACGACGGCCTTTTTGAATGGTCACCTAGATGAAACTGTTTTTATGCAATTGCCTCAGAGTTTTGAATGTAAACCTAATGCTGATAAAGTCTTGAAATTGAAAAAGGCCATTTATGGACTAAAACAGTCAGCGAGGGCCTGGCTGTTTAGTTTCTCATGA

Protein

MAGSYIVNVPKLKGRENFDEWAFAAEHFLMLEGVDIHKLESSTDASSIDERKAKAKLIMTIDSSIYVHIKNEQTVQGVWKRLKALYDDCGFTRRISLLRQLISIRLEDSESMEAYVTQMVDTAQKLKGTGFQITDEWIGSLLLAGLTDTFAPMIMAIEHSGLAISTDAIKSKLLDMSSEVGNTATNNAFLSKVSQMIRNGNKVSFEEDVCYIRNRQNVLVGKANLVNGVYKLDIKSDSLFACSATTVTSEIWHRRLGHINSRSLNIMKNGAVDGISYMDKAEIDMSKCIICCEGKQSRLPFSHKGTRSENVLELVHADVCGPMEQPSIGLSKYFLLFVDDYSRMAFVFFLKAKNRVFKYFKEFKTLVETQTGRKLKALRTDNGGEFCSLEFDEFLKKNGIVHQTTNPHTPEQNGLCERLNRTVVERARCLLFEAGLDKKFWAEAINTAVYLRNRTLAAGLRKTPYEIWSGKKPNLSHIRIFGSPAMVHVPKAKRTKWNKKANEHILIGYSESTKGYRLYNVKTKNITTSRDVVIMEKINDTDMIQAVVEEKETIPSEEGIQKCAVTSEDSTCDSLNSTYMTDDATYVPDDTSTTSSDEFCDSKSNHKSENLQPIIKVEKRTRKKPDWYGYNNICQSSEEVDDNLLTYEDVMRGSEQEEWSKAMKEEIQSFHQNDAWELVDRPSGENIVACKWVYKKKLNSDNSVRYRARLVAKGFSQRQGIDFKETFSPVLKYSTLKLLFAISVNLNLSITHLDVTTAFLNGHLDETVFMQLPQSFECKPNADKVLKLKKAIYGLKQSARAWLFSFS

Uniprot

A0A1Y1N668   A0A1Y1NAZ7   A0A1Y1N664   A0A1Y1N932   A0A0V1APU2   A0A146LH62   + More
A0A355BEE2   A0A0A9XY84   A0A194RJV9   A0A0A1WXQ3   A0A034VP70   A0A194RU38   A0A0J7NHJ8   A0A2A4JRI1   A0A2J7Q1Z2   A0A2J7R668   A0A2J7RKJ6   A0A2J7R8S8   A0A0N1ICY1   A0A1Y3EBW8   A0A0V0T3I0   A0A2A4J959   A0A2J7R8R7   A0A0V0TUP0   A0A1Y1N3X2   A0A085NU43   A0A0V1APS7   A0A0V1FKH2   A0A0V1K1Y9   A0A0A9XNJ4   A0A0A9XIP2   A0A0A9XD75   A0A0A9XFC8   A0A0V1F2E6   A0A085MVP5   A0A0V0YNF4   A0A1Y1LYU4   A0A085N572   A0A1Y1LP39   A0A251T2S6   A0A1W7R6K6   A0A1W7R6J6   A0A1X7U495   A0A0A1WFC7   T1PKV2   A0A251TN47   A0A0J7KG03   A0A251TCA0   A0A251T6N3   A0A0A9WPH5   A0A0K8U6S2   A0A2B4R8Q4   W8AEF0   A0A392M204   A0A0K8U8C3   A0A0V0IV83   A0A151RZS8   A0A085ND65   A0A251UIF2   A0A224XA26   Q6L3N8   A0A0A1XLZ7   W8AQ86   W8AL23   A0A0V0Z6Q0   A0A0A9WRE3   A0A396INR0   A0A0K8U6X2   A0A0A9YB53   A0A0A9W6P7   W8B7K5   A0A0K8WJW9   A0A151T5R0   A0A151TGQ2   A0A2J7PSB2   W8BYI7   A0A1W7R6A5   A0A151THM1   A0A2N9ETM3   A0A0J7K6W1   A0A2N9GX95   A0A2N9IWX1   A0A2N9GK87   Q5MG99   A0A2K3MYT4   A0A151R2G6   A0A2N9HR09   A0A151TGP0   A0A2N9ELX4   A0A2N9IUL9   A0A0V0RWJ3   Q7Y141   A0A151TPU3  

Pubmed

28004739    26823975    30148503    25401762    26354079    25830018    + More
25348373    24929829    28538728    24495485    29922311    22057054    30397259    24500806    28382043    16109971   

EMBL

GEZM01011856    JAV93393.1    GEZM01011855    JAV93396.1    GEZM01011859    JAV93384.1    + More
GEZM01011857    JAV93390.1    JYDH01000330    KRY26801.1    GDHC01011760    JAQ06869.1    DNYX01000353    HBK84078.1    GBHO01019781    JAG23823.1    KQ460297    KPJ16236.1    GBXI01011094    JAD03198.1    GAKP01015352    JAC43600.1    KQ459875    KPJ19636.1    LBMM01004924    KMQ91985.1    NWSH01000816    PCG74073.1    NEVH01019375    PNF22597.1    NEVH01006980    PNF36330.1    NEVH01002725    PNF41351.1    NEVH01006721    PNF37230.1    KQ460882    KPJ11482.1    LVZM01021469    OUC41357.1    JYDJ01000808    KRX33413.1    NWSH01002292    PCG68657.1    PCG68658.1    PNF37231.1    JYDJ01000136    KRX42725.1    GEZM01013472    GEZM01013471    GEZM01013470    JAV92539.1    KL367475    KFD72989.1    KRY26802.1    JYDT01000069    KRY86576.1    JYDS01000009    JYDV01000021    KRZ33483.1    KRZ41218.1    GBHO01024949    JAG18655.1    GBHO01024951    JAG18653.1    GBHO01024947    JAG18657.1    GBHO01024950    JAG18654.1    JYDR01000001    KRY80095.1    KL367628    KFD61291.1    JYDU01000001    KRY01876.1    GEZM01045163    GEZM01045162    JAV77888.1    KL367553    KFD64618.1    GEZM01050757    JAV75412.1    CM007901    OTG04806.1    GEHC01000867    JAV46778.1    GEHC01000868    JAV46777.1    GBXI01017107    JAC97184.1    KA648745    AFP63374.1    CM007899    OTG12557.1    LBMM01008124    KMQ89126.1    CM007900    OTG08534.1    OTG06758.1    GBHO01033237    JAG10367.1    GDHF01030254    JAI22060.1    LSMT01001145    PFX12880.1    GAMC01019995    JAB86560.1    LXQA010002204    MCH81362.1    GDHF01029405    JAI22909.1    GEDG01001927    JAP36462.1    KQ483510    KYP48029.1    KL367515    KFD67411.1    CM007895    OTG22666.1    GFTR01008662    JAW07764.1    AC149291    AAT38758.1    GBXI01002679    JAD11613.1    GAMC01018338    JAB88217.1    GAMC01019998    JAB86557.1    JYDQ01000379    KRY07987.1    GBHO01033235    JAG10369.1    PSQE01000003    RHN67289.1    GDHF01029905    JAI22409.1    GBHO01016859    JAG26745.1    GBHO01043059    JAG00545.1    GAMC01020736    JAB85819.1    GDHF01000873    JAI51441.1    CM003610    KYP62383.1    CM003608    KYP66219.1    NEVH01021933    PNF19227.1    GAMC01008189    JAB98366.1    GEHC01000963    JAV46682.1    KYP66486.1    OIVN01000313    SPC78143.1    LBMM01012645    KMQ86082.1    OIVN01002473    SPD03944.1    OIVN01006239    SPD28653.1    OIVN01002345    SPD02856.1    AY830138    AAV88069.1    ASHM01014005    PNX95963.1    KQ484186    KYP36645.1    OIVN01004297    SPD16537.1    KYP66220.1    OIVN01000172    SPC75650.1    OIVN01006211    SPD27863.1    JYDL01000068    KRX18751.1    AC133339    DP000009    AAP46257.1    ABF99717.1    CM003606    KYP69041.1   

Proteomes

UP000054776    UP000053240    UP000036403    UP000218220    UP000235965    UP000243006    + More
UP000055048    UP000054995    UP000054805    UP000054826    UP000054632    UP000054815    UP000215914    UP000007879    UP000225706    UP000075243    UP000054783    UP000265566    UP000236291    UP000054630   

Pfam

PF13976   gag_pre-integrs        + More
PF00665   rve
PF07727   RVT_2
PF13961   DUF4219
PF00098   zf-CCHC
PF17766   fn3_6

Interpro

IPR001878   Znf_CCHC        + More
IPR012337   RNaseH-like_sf       
IPR036875   Znf_CCHC_sf       
IPR013103   RVT_2       
IPR001584   Integrase_cat-core       
IPR039537   Retrotran_Ty1/copia-like       
IPR036397   RNaseH_sf       
IPR025724   GAG-pre-integrase_dom       
IPR025314   DUF4219       
IPR011009   Kinase-like_dom_sf       
IPR009056   Cyt_c-like_dom       
IPR041469   Subtilisin-like_FN3       
IPR036852   Peptidase_S8/S53_dom_sf       

SUPFAM

SSF53098   SSF53098        + More
SSF57756   SSF57756       
SSF56112   SSF56112       
SSF52743   SSF52743       

Gene 3D

3.30.420.10     3.40.50.200    

ProteinModelPortal

A0A1Y1N668   A0A1Y1NAZ7   A0A1Y1N664   A0A1Y1N932   A0A0V1APU2   A0A146LH62   + More
A0A355BEE2   A0A0A9XY84   A0A194RJV9   A0A0A1WXQ3   A0A034VP70   A0A194RU38   A0A0J7NHJ8   A0A2A4JRI1   A0A2J7Q1Z2   A0A2J7R668   A0A2J7RKJ6   A0A2J7R8S8   A0A0N1ICY1   A0A1Y3EBW8   A0A0V0T3I0   A0A2A4J959   A0A2J7R8R7   A0A0V0TUP0   A0A1Y1N3X2   A0A085NU43   A0A0V1APS7   A0A0V1FKH2   A0A0V1K1Y9   A0A0A9XNJ4   A0A0A9XIP2   A0A0A9XD75   A0A0A9XFC8   A0A0V1F2E6   A0A085MVP5   A0A0V0YNF4   A0A1Y1LYU4   A0A085N572   A0A1Y1LP39   A0A251T2S6   A0A1W7R6K6   A0A1W7R6J6   A0A1X7U495   A0A0A1WFC7   T1PKV2   A0A251TN47   A0A0J7KG03   A0A251TCA0   A0A251T6N3   A0A0A9WPH5   A0A0K8U6S2   A0A2B4R8Q4   W8AEF0   A0A392M204   A0A0K8U8C3   A0A0V0IV83   A0A151RZS8   A0A085ND65   A0A251UIF2   A0A224XA26   Q6L3N8   A0A0A1XLZ7   W8AQ86   W8AL23   A0A0V0Z6Q0   A0A0A9WRE3   A0A396INR0   A0A0K8U6X2   A0A0A9YB53   A0A0A9W6P7   W8B7K5   A0A0K8WJW9   A0A151T5R0   A0A151TGQ2   A0A2J7PSB2   W8BYI7   A0A1W7R6A5   A0A151THM1   A0A2N9ETM3   A0A0J7K6W1   A0A2N9GX95   A0A2N9IWX1   A0A2N9GK87   Q5MG99   A0A2K3MYT4   A0A151R2G6   A0A2N9HR09   A0A151TGP0   A0A2N9ELX4   A0A2N9IUL9   A0A0V0RWJ3   Q7Y141   A0A151TPU3  

PDB

1C1A     E-value=0.000389684,     Score=107

KEGG

NA   

GO

GO:0003676   GO:0008270   GO:0015074   GO:0000943   GO:0003964   GO:0020037   GO:0009055   GO:0004252   GO:0007264   GO:0007165   GO:0016020   GO:0006511   GO:0005525   GO:0016491   GO:0003824  

PANTHER

PTHR11439  

Length:

807

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.18756

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00603

outside

1  -  807

 

 

Pi

250.562055

Theta

132.608803

Tajima's D

-0.957149

CLR

0.55644

CSRT

0.144342782860857

Interpretation

Uncertain