Gene
KWMTBOMO05332
Annotation
reverse_transcriptase_[Danaus_plexippus]
Location in the cell
Nuclear Reliability : 1.616
Sequence
CDS
ATGCAGTTCCGCCTTGTCGTGGCGGTGGGGCTTAAGCGTGCGTCCCTAAAATCGCGTGCAGAGGAATCTGTGTGGGACGCCGCGACCAAGAGAACTGCGCCCAGCTCTCTTCGGCCGCCTCCGCGTTCTGCGGGGGATGCCATGAGAGAGAGCGAGGGACCTTCTCCCCTCGCCCTTTGCACTGACAAAGAGTTCCATTCTGGGGATGAGGGGTTGGCTCTCGGGAGCCTGGAGGGTACCGCCCGCGAGTCGGGCGGAGAATCCCTCCGTGCTTCCTCAGTGGAAGCACGCTGCCCCACGTACTCTGGGGGGGGCAACAATTGTCAGGATGAAGGGGGCTGTGCGACGGGCAGCGGAATTCCCGTCGAACCGAGGCGCTCCCCGATCGCCGGCTCGATGCGCTCTGCGCTCGCCAGCGACTCGGGTGCAATCAATCCCACCAGACCATCGGCGGGGAAAAAGAGGGGGAGAAGAAAGACGGCATTACCAACTTCCGATGACGGCGGCGCATCATCCTCCGGCACTGAGGTACCGGAAAAAACGATGGCCATCGAGGAGGTGACTCCGGTAGTTTCGATGCCTGCTACGTCGGAAGACGCGATGCCCGCTCCCCAGTGGGCACCAGTGAGGAGGAGGGGCGCTGTGTCACCGGCGACGTCCGTGGAGTCCATGTCGACGTCGGCCGCGTCCCTGGCTAGCGGGGACGAGACGTTCCGGGACCTCGACCTTGCATTGGTTAATTTGGGTAAGTTGCTGTCGACTGTGGCTTCCAAGGGCGCCGAGCCAGGCAGCAGTTACCGGAAACGGCTCCGGGAGGCAGCCGCTATGGTGAGAACGAGGCTGATCCCCACCATGTCCAAGCTTTATGACTTGGTAGAGAGCCGAGAGGTGGAGAGCAAGGATCTCGTCGCTCATTGTGACTCCAGCGAGAGTCGCATCCCGGGAGACACCCCGGCCTTGCGAGGAGGGACTCCCTTGTTGCCGAGGCCTCCGCTGGCACGCTCTGGACCCCCCGCGGGGGCGATGGATACTGACGTGCACTTGCGGTCGGCGGTGGGTTTGACAGCGCAAATGCCAGAGCCCAATCCTGTGGTCCCTGTCCCGCTAGCACCTACCCCCGCGCTCCCTCGCCCTCCACGAAGGGTTGAGTTAAGGCCTGCGCCGCCTCCGCGGATATCGGCCGCCCCTGCGTCTGCACGGAGAGGAAGGCTAAGCCCTGCGCCAGCGCAGGCTGAAGACATCCGTTCGCCACTGGCGAGGATGGTGGATGAGTGGCCGGCGCTACCGCCGCCTCTTTCACCCTCGCGTGCTGCGGGATTGCAGGCTCGCGGGCCACACAACACGGCTACTGGGATAGAAGAGGTGGACTACTCCCTCCCAAGCAGAGAGGAAATGGTGGCCTGTATCTCGCGGGCGGTGGCGGTTGAGGTCAGCAAGCACTTTGCCGGCCTCGAGGAGATACTCCGCTCTTTGATTGATTCCGGAGATTGCGTCCCGGCGCCAACAACCGCAGCCGCCCCGCGGGGCCAGGCCGCCCGGCCGACCTCTACCCCCACGCCATCCGCGAGGTTGGCCCGGCGTAGAGGCCGGGACCAGAATAACAAGGGTACGGGTGCCCAGAATCCTGCCCCGAAATCCCAACCCCGTCCCCTTCCTGCTCCCCCGTCAAGCATGGACGAGAGCTGGACGGAAGTGGTGAAGCGGGGCAAGAAAGCTAAGCAGCAGACAGCGGCTCTGGCAGCTCCCAGAGGGGGTCGAGCGCCAACTGCGGCAGCCCGAAGCACAGAGCTGGCGGCCGTGGTTGCTCCTCGTGAGAGTCGAGCACTGGCAACCAGGAAGCAGAACGGCAAAAAGAAGAAGCCGCGCGCAACGCGGTCGGCTGCCGTCGTAGTGACGTTGCTACCGGCCGCCGCCGAAAAGGGCCTCACCTATAATGACGTGATGGCCCGAGCGCGCGCGGCTGTAAGTTTGGACGAAATCGGGGCGGAGGAGGGCCTCCGCTTCCGGCATACAGCCAATGGAGCGAAGCTGCTGGAGTGTCCCGGTGCCGACAGTTCTGGCATCGCAGACAAACTAGTGGCGACGCTCCGCGTGGCACTGCCGGAGGATGAGGTGCGCGTGCACAGGCCGGTGAGGATGGCCGAGATTAGAATCACTGGCCTGGACGACTGTGCTACCAAGGAGGAGGTGGCAGCCGCAATAGCCGCTCAAGGTGGATGTGCCTTGGAGAGCGTGACCGTGGGCGAACTTTGCTCAGGGTACTCCGGAGCTAGGTCAGCGTGGGCGCGCTGCCCTGTGGAGGCAGCCACTTCCTTGGCCACTCCTCCGCCGGGAAGGTCAATGGGGGATCCGGGGAGACTGCGCATGGGCTGGATAGCGGCCCACGTGCGTCTCCAAGAACCACGTGCCTGGCGATGCCTCCGGTGCTTTAGCACCGGGCACGGCCTCGCTAAGTGCACCAGCTTAGTTGACCGCAGCGGTCTATGTTTCCGCTGCGGCCAACCGGGTCATAAAGCGGCGTCCTGCACGGCCGCCCCGCACTGCGCTCTGTGCGCTGCGGCCGGGCGTAGGGCAAACCACCGGGCGGGAGGCAAGGCTTGCTTCCCGTCCAGTGTTAATACTGAACGCAACCGGCGCCGAAAATCGAGGCGCCGGCAGAAGAGAAGGTTGGCCAGAGGAGCACTGGCCAATGTTGCAATCCCCACTGCGGCGCCGGTGCCGGAGGGTGGGGGCAGCGGAAACCTGAACCACTCCGCCAGAGCTCAGGACATGCTGTCTCAGAGCATGGCGGAGTGGTCCATAGACGTGGCTGTGGTCGCCGAGCCGTACTTCGTTCCCCCGGCAAATGATTGCTGGTTCGGGGACGATAGCGGCCTGGCGGCCATAGTCATAAGAAGAGACGCGACGATCCCCCCCTTGGCGATGGTGACCAAGGGCCAAGGGTTCGTCGCGGTACAGCTGGAAGGGACCGTCGTGATCGGGGCGTACTTCTCTCCGAATAGGCCTACTGTCGACTTCGGGCATTTCCTGGGCGGGATCGGGGCGATTGCTCGCCGCCTCGCTCCTCGTCCAGTGATTCTTGCGGGGGACCTCAACGCGAAGTCTGTCGCATGGGGCTCCCCCCGCTCGGACGCTCGTGGTAGGCTGTTGGAGAGGTGGGCGAACGTGACCGGCCTCTATTTGTTGAATAGAGGGTCGGTTGCGACGTGCGTGCGGTGGCAGGGCGAGTCTATTGTGGACGTTACGTTCGCAAGCCCGGCCATCGCACGTCGTATCCGCGACTGGAGAGTTTTGGAGGGGGCGGAGACACTGTCAGATCACCGATATATTCGGTTTGATCTCTCCGCCCGCTCCGCAGTCGCGGACGTCCACGGGGACCACCCCCGTGGTGCGTCCCGGTCATTCCCACAGTGGGCACTGAAGCGCCTGAATAAGGAGCTCCTGATGGAAGCCTCTACGGTGGCGGCGTGGGCGCCCATGCGTCCACACCCAGTTGAGGTCGAGGACGAAGCGGGGTGGTTCCGGGACACGATGCGTCGCATCTGTGACGTGTCGATGCCCCGGATTAGCCCTCGACCTCCCAATCGCCAAGTGTACTGGTGGTCGCCCGAAATCGCGCAACTCCGCGTGGAGTGCGTTCGGGCGAGGCGCCAGTGCGCGAGGCATCGCCGCCGTCGCCTGCCGCGGCGCAACGATCCGGTGGCGTTCGCGGTGGTAGAGGCCCAGCTGTACGGCGCATTTCGCGTCGCACAGAGGGCGTTGCAGCTGGCCATCAGAAGAGCCAAGGACCAACACATGGAGAGTCTCCTGGAGACGCTGGATGAGGATCCGTGGGGGCGACCCTATCACATGGTGCGCAATAAAATGCGCCCATGGGCCCCCCCAATCACGGAGCGTCTCCAGCCTCAGCAGCTGCGGGACATCGTCTCGGCACTGTTCCCGCAGGAGCAGGGGGGATTTGTCGCTCCCGCTATGGGCGCGCCGCCGGAGTACGACGGCGTCGCCCCTGCTGAGGTGCCCCATATAACAGGGGCGGAGCTCCGTGTGGCAGTACGCAAAATGTGCGCAAAGGACACTGCACCTGGCCCGGACGGCATCCATGGCCGGGTTTGGGCCTTGGCTCTTGGTGCCCTAGGGGACCGACTTTTGAGGCTTTATAACTCCTGCCTCGAGTCGGGACGGTTTCCTTCATCGTGGAGGACGGGCAGACTTGTGCTGTTGAGAAAGGAGGGGCGCCCGGCGGATACTGCCGCCGGGTACCGTCCCATCGTGTTGTTGGATGAGGTGGGCAAACTGCTGGAACGCATTCTGGCAGCCCGCATCATCCAGCATCTGATCGGGGTGGGACCCGATCTGTCGGCGGAGCAGTATGGCTTCCGAGAGGGCCGCTCAACGGTGGACGCGATCCTTCGCGTGCGGGCCCTCTCGGAGGAGGCCATCTGTGGGGGTGGGGTGGCCTTGGCGGTGTCGCTCGACATCGCCAATGCGTTTAACACCCTGCCCTGGTCCGTGATAGGGGGGGCGCTGGAAAGACACGGAGTGCCCCTCTACCTTCGCCGGCTGGTCGGCTCCTACTTGGAGGACAGATCGGTCACATGTACCGGACACGGTGGGGTCGTACATCGGTTCCCGGTCGTTCGCGGTGTTCCACAGGGGTCGGTACTCGGCCCTCTTTTGTGGAATATCGGGTATGACTGGGTGCTGAGGGGTGCCCTCCTCCCGGGCCTAAGCGTAATATGTTACGCAGACGACACGCTGGTCGTGGCCCGGGGAGGGAGCTTTGCTGAGTCTGCTCGTCTTGCCACCGCTGGGGTAGCGCATGTCGTCGGCAAAATCAGGAGATTGGGCCTCGACGTGGCGCTCAGTAAATCCGAGGCCATGTGGTTCCACAGGCCCCGGAGAGTGCCACCTGTCGATGCCCATATCGTGGTTGGAGGCGTCCGGATCGGGGTCGGGGTGCAGTTAAAGTACCTCGGCCTCATTCTGGACAGTCGTTGGACCTTCCGTGCTCACTTTCAGCACCTGGTCCCTCGTTTGTTGGGGGTGGCCGGCGCGTTAAGCCGGCTTCTTCCCAACATCGGGGGCCTGACCAGGGTCATCCGTGGTTATCGCACCATCTCTTTTGAGGCGGCGTGTGTACTGGCTGGGACGCCGCCTTGGGTCCTGGAGGCGGAGGCGCTCGCTGCTGACTATCAGTGGCGGGCTAACCTTCGTGCCCGGGGCGTGGCGCGTCCCAGCCCCAGTGTGGTCAGAGCGCGGAGGGCCCAATCTCGGCGGTCCGTGCTGGAGTCATGGTCCAGGCGGCTGGCCGATCCTTCGGCTGGTCGTAGGACCGTCGAGGCGATTCGCCCGATTCTTGTGGATTGGGTGAATCGTGACAGAGGACGCCTCACTTTCCGGCTCACGCAGGTGCTCACTGGGCATGGTTGCTTCGGCGAGTTCCTGCACCGGATCGGAGCCGAGCCGACGGCAGAGTGTTACCATTGTGGTTGCGACTTGGACACGGCGGAGCACACGCTCATTGCCTGCCCCGCATGGGAGGGGTGGCGCCGTGTCCTTGTCGCAAAAATAGGAAACGACTTGTCGTTGCCGAGTGTTGTGGCATCGATGCTCGGCAACGACGAGTCGTGGAAGGCGATGCTCGACTTGAGTGCACCATCTCGCAGAAGGAGGCGGCGGGGCGCGTGA
Protein
MQFRLVVAVGLKRASLKSRAEESVWDAATKRTAPSSLRPPPRSAGDAMRESEGPSPLALCTDKEFHSGDEGLALGSLEGTARESGGESLRASSVEARCPTYSGGGNNCQDEGGCATGSGIPVEPRRSPIAGSMRSALASDSGAINPTRPSAGKKRGRRKTALPTSDDGGASSSGTEVPEKTMAIEEVTPVVSMPATSEDAMPAPQWAPVRRRGAVSPATSVESMSTSAASLASGDETFRDLDLALVNLGKLLSTVASKGAEPGSSYRKRLREAAAMVRTRLIPTMSKLYDLVESREVESKDLVAHCDSSESRIPGDTPALRGGTPLLPRPPLARSGPPAGAMDTDVHLRSAVGLTAQMPEPNPVVPVPLAPTPALPRPPRRVELRPAPPPRISAAPASARRGRLSPAPAQAEDIRSPLARMVDEWPALPPPLSPSRAAGLQARGPHNTATGIEEVDYSLPSREEMVACISRAVAVEVSKHFAGLEEILRSLIDSGDCVPAPTTAAAPRGQAARPTSTPTPSARLARRRGRDQNNKGTGAQNPAPKSQPRPLPAPPSSMDESWTEVVKRGKKAKQQTAALAAPRGGRAPTAAARSTELAAVVAPRESRALATRKQNGKKKKPRATRSAAVVVTLLPAAAEKGLTYNDVMARARAAVSLDEIGAEEGLRFRHTANGAKLLECPGADSSGIADKLVATLRVALPEDEVRVHRPVRMAEIRITGLDDCATKEEVAAAIAAQGGCALESVTVGELCSGYSGARSAWARCPVEAATSLATPPPGRSMGDPGRLRMGWIAAHVRLQEPRAWRCLRCFSTGHGLAKCTSLVDRSGLCFRCGQPGHKAASCTAAPHCALCAAAGRRANHRAGGKACFPSSVNTERNRRRKSRRRQKRRLARGALANVAIPTAAPVPEGGGSGNLNHSARAQDMLSQSMAEWSIDVAVVAEPYFVPPANDCWFGDDSGLAAIVIRRDATIPPLAMVTKGQGFVAVQLEGTVVIGAYFSPNRPTVDFGHFLGGIGAIARRLAPRPVILAGDLNAKSVAWGSPRSDARGRLLERWANVTGLYLLNRGSVATCVRWQGESIVDVTFASPAIARRIRDWRVLEGAETLSDHRYIRFDLSARSAVADVHGDHPRGASRSFPQWALKRLNKELLMEASTVAAWAPMRPHPVEVEDEAGWFRDTMRRICDVSMPRISPRPPNRQVYWWSPEIAQLRVECVRARRQCARHRRRRLPRRNDPVAFAVVEAQLYGAFRVAQRALQLAIRRAKDQHMESLLETLDEDPWGRPYHMVRNKMRPWAPPITERLQPQQLRDIVSALFPQEQGGFVAPAMGAPPEYDGVAPAEVPHITGAELRVAVRKMCAKDTAPGPDGIHGRVWALALGALGDRLLRLYNSCLESGRFPSSWRTGRLVLLRKEGRPADTAAGYRPIVLLDEVGKLLERILAARIIQHLIGVGPDLSAEQYGFREGRSTVDAILRVRALSEEAICGGGVALAVSLDIANAFNTLPWSVIGGALERHGVPLYLRRLVGSYLEDRSVTCTGHGGVVHRFPVVRGVPQGSVLGPLLWNIGYDWVLRGALLPGLSVICYADDTLVVARGGSFAESARLATAGVAHVVGKIRRLGLDVALSKSEAMWFHRPRRVPPVDAHIVVGGVRIGVGVQLKYLGLILDSRWTFRAHFQHLVPRLLGVAGALSRLLPNIGGLTRVIRGYRTISFEAACVLAGTPPWVLEAEALAADYQWRANLRARGVARPSPSVVRARRAQSRRSVLESWSRRLADPSAGRRTVEAIRPILVDWVNRDRGRLTFRLTQVLTGHGCFGEFLHRIGAEPTAECYHCGCDLDTAEHTLIACPAWEGWRRVLVAKIGNDLSLPSVVASMLGNDESWKAMLDLSAPSRRRRRRGA
Summary
Uniprot
ProteinModelPortal
PDB
1WDU
E-value=2.40686e-11,
Score=172
Ontologies
GO
Topology
Length:
1895
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.3328
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00001
outside
1 - 1895
Population Genetic Test Statistics
Pi
0
Theta
0
Tajima's D
0
CLR
0.02484
CSRT
0
Interpretation
Uncertain
