SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05322  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA002521
Annotation
PREDICTED:_gamma-glutamyltransferase_isoform_X1_[Bombyx_mori]
Location in the cell
Mitochondrial   Reliability : 1.809
 

Sequence

CDS
ATGCAAAGTAAATACGCGCCACAAGGAATGGTGGTGGCACCTCACCACCTTGCTACTCAAAGTGCTATTGATATCCTAAGAGAAGGAGGCACAGCCATAGAGGCAATGGTCGCAGCGGCGGCGACTATATCAGTTGTCTACCCTCATATGAACAGCATTGGAGGTGACTCGTTTTGGCTAATAGTACCACCTCATGGTGATCCCATAGCCATTGAGGCATCCGGCACAGCAGGAAGTTTAGCTACTGAAGATTTCTTCAAAGGCTACGACAAGATTCCGTATCTTGGGCCTAAGGCAGCTATAACCGTTGCGGGCGCTGTCGGAGGTTGGCAGGAAGCCCTAAATTATGTTACCGAAAATGGATACCAGAGGATTTCAGTATCTCGATTATTAGCTGATGCTATAAGGTATGCTGAAGAAGGAGTCTCAGTAACACAAAGTTACATCAGTAATTTAGAAAAATTTAAAGATTTGAATGTATCTAGTGAGTTTCGGAGAATTTATCTATTGGATGGTAACAATCCTAAGATGGGTGATATTTTGTATCAAAAGGAGTTAGGTACTACCTTAAGGCGTCTAGCCGAGAATGGATTAAATAGTTTCTATAAAGGGGAACTAGCAAGAACAATAGCAGAAGACATGGCCACTGTCGGTATGCCGATTACGGAATCTGACTTACAAAACTTTACGGCAATTCGAAAAACTCCCTTGCGACTTTTACTAAAACAAGGAGAAGTTTTCAATCTTCCACCACCTACCCAAGGTTTGGTTTCGTTAAATATCCTTGGAGTGTTAGAAAAACTTAATATAGATGGAAAAAATGAGGGCGAACTTGTGCACGCCACAGTCGAAGCCACAAAGCAAGCTTTTGAAATGAGAAACGATTACATAACTGATCCAAAATATATGAAAATCGATCCCAATTCATTACTGACTAGTCAGCACTTGTCCAAAGTTGCCAGTAAAATAAGTTTGGATAGAGCCGCTTCTGTAGGACAGGGGAAGGGCCCAGGGGACACGATTTGGATGGGGGCTATGGATAGCAAAGGCTTTTCGGTGTCTTTCATTCAAAGTGTATACCACGAGTTTGGAAGTACTGTCGTGTTGCCCAAAACTGGTATACTATGGCAAAATAGAGGAGTTTCTTTCACTTTAGAAAAAGATAAATTATTGACTCTACAGCCTGGAAAAAAACCTTTTCATACGCTAAACTTGGCTACAGCAAGGCTAAATGATGGTAGAGTAATGATATTTGGGACTAGAGGAGGTGACGGACAACCTCAAACCCAATCAGCTATCTTTTACAGACACGTGGTTCAGGGTTTGAACTTACAAGCCGCAGTATCGGCACCGAGATGGCTTTATGGCCGCATCGCAGGGGATGCTGAAGACACCCTGAAAATCGAAAGCAGATTTAGTGAAGAAACCGTGAACTATTTAAAGGAAAGAGGTCACGATGTAGAGATTTTGCCAGAGTTTTCTGAGAAGGTAGGTCACGCTGGTGCATTAGTGAGACACCCGAACGGTGTGATGGAAGGCGCATTCGATCCTCGGTGTGATGGCAGTGCATCGGGATTTTAA
Protein
MQSKYAPQGMVVAPHHLATQSAIDILREGGTAIEAMVAAAATISVVYPHMNSIGGDSFWLIVPPHGDPIAIEASGTAGSLATEDFFKGYDKIPYLGPKAAITVAGAVGGWQEALNYVTENGYQRISVSRLLADAIRYAEEGVSVTQSYISNLEKFKDLNVSSEFRRIYLLDGNNPKMGDILYQKELGTTLRRLAENGLNSFYKGELARTIAEDMATVGMPITESDLQNFTAIRKTPLRLLLKQGEVFNLPPPTQGLVSLNILGVLEKLNIDGKNEGELVHATVEATKQAFEMRNDYITDPKYMKIDPNSLLTSQHLSKVASKISLDRAASVGQGKGPGDTIWMGAMDSKGFSVSFIQSVYHEFGSTVVLPKTGILWQNRGVSFTLEKDKLLTLQPGKKPFHTLNLATARLNDGRVMIFGTRGGDGQPQTQSAIFYRHVVQGLNLQAAVSAPRWLYGRIAGDAEDTLKIESRFSEETVNYLKERGHDVEILPEFSEKVGHAGALVRHPNGVMEGAFDPRCDGSASGF

Summary

EMBL
BABH01011016    GU270851    ADB27113.1    JTDY01001696    KOB73135.1    ODYU01004154    + More
SOQ43719.1    KQ461154    KPJ08378.1    RSAL01000103    RVE47434.1    FNQS01000013    SEA97337.1    LCWI01000010    KKZ18146.1    LUTO01000052    OSN03972.1    JPUX01000002    KFF86524.1    CP013046    ALL36638.1    CP018926    ASM10590.1    CP033504    AYU89020.1    PPGF01000005    PNU39760.1    KQ458714    KPJ05475.1    LUTP01000020    OSN05620.1    UIRQ01000170    SVK46869.1    RJUJ01000015    ROH77480.1    LT906479    SNV89868.1    CP014136    ATA22384.1    UAUM01000002    SPZ52892.1    LR134494    VEI65150.1    FWWG01000004    SMB24613.1    PESE01000005    PYD38028.1    FBSD01000008    CUW03428.1    CP000826    ABV40036.1    LT883155    SMZ55240.1    RBOX01000029    RMN21758.1    JRUQ01000102    KGT86333.1    NVXY01000012    PKH21230.1    FP236843    CAX58388.1    AGBW02009158    OWR51493.1    UGYN01000002    SUI52927.1    CP025084    AUH04011.1    RCUM01000284    MNG64574.1    CP006566    AGP43140.1    RCUE01000003    RCUO01000007    RCUM01000213    RCUN01000006    RCUS01000023    MMZ40001.1    MNB56459.1    MNG62108.1    MNH52291.1    MNL95564.1    LR134117    VDZ52187.1    ADBY01000013    EFE98026.1    CP014017    AMG99132.1    UGYL01000001    SUI72010.1    MRWE01000027    ORJ24547.1    CP015613    ANS41318.1    PZPP01000013    PTM35489.1    MPUJ01000015    ONK02466.1    BHES01000073    GBU13570.1    LMLI01000019    KQN44125.1    MLJI01000001    ORM92579.1    OCMY01000001    SOD36671.1    MRWD01000009    ORJ22296.1    AKIT01000038    EJM98557.1    LN907827    CUU23086.1    RHDS01000002    RNA78187.1    DOTQ01000045    HBZ17694.1    CP022725    AXU96262.1    QGHE01000016    PWJ74190.1    QKMJ01000008    PYG47686.1    PDET01000001    PRD17073.1    AKIU01000026    EJL91265.1    MWUE01000028    OQP31195.1    JRXE01000015    KOC89634.1    AJHJ01000027    EIC83245.1    CP002206    ADO08466.1    AP012551    BAN95140.1    QZDF01000039    RJL19148.1    CP020820    AWP33893.1    PUEK01000002    PQL29028.1    FUWI01000001    SJZ29912.1    OANP01000051    SNW60808.1    JQHN01000022    KFX11008.1    CP002505    ADW72556.1    CP003403    AFE57137.1    ASZC01000026    ERK06540.1    LMLJ01000055    KQN49037.1    LXYV01000788    PKB87265.1    CP028349    AVV36802.1    PUFZ01000033    PZL94865.1    RJVB01000007    ROR06748.1    CP021894    ASN84399.1    JMRT02000001    KKD34278.1    UGGO01000001    STQ46038.1    AEDL01000002    EFM21033.1    JMPJ01000022    KFC84985.1    JMSO01000178    KMV69227.1    MIPO01000145    ORM76960.1    JSXC01000039    KHN50498.1    MTCH01000013    PIJ59527.1    FQWI01000012    SHH55379.1    JQOD01000013    KGA31269.1    MLFS01000018    ORM73634.1    FOVG01000001    SFN66455.1    CP015750    AOR64198.1    JQOF01000043    KGA39255.1    CPYI01000025    CNF59764.1    JRUP01000015    KGT90486.1    QICZ01000001    PXW21282.1    RHHM01000018    RQM36659.1    JPSO01000047    KFF69514.1   
Proteomes
UP000005204    UP000037510    UP000053240    UP000283053    UP000187280    UP000034361    + More
UP000194062    UP000028708    UP000058492    UP000198289    UP000281251    UP000236556    UP000053268    UP000194020    UP000258172    UP000274511    UP000215134    UP000217182    UP000250791    UP000273164    UP000192912    UP000248196    UP000242817    UP000007074    UP000246092    UP000030351    UP000237543    UP000008793    UP000007151    UP000255529    UP000017700    UP000014900    UP000281391    UP000005723    UP000062490    UP000254742    UP000192536    UP000013567    UP000241614    UP000189286    UP000282082    UP000051594    UP000193749    UP000219271    UP000192722    UP000007506    UP000059419    UP000278924    UP000266781    UP000245996    UP000247871    UP000239181    UP000007295    UP000192769    UP000037088    UP000011072    UP000006631    UP000016901    UP000266354    UP000247725    UP000238919    UP000242630    UP000250713    UP000033091    UP000007257    UP000007594    UP000016607    UP000050990    UP000232559    UP000241538    UP000249374    UP000275666    UP000263924    UP000033668    UP000254304    UP000004279    UP000028640    UP000037152    UP000193803    UP000053038    UP000229180    UP000184537    UP000029435    UP000193104    UP000198968    UP000094471    UP000029447    UP000045824    UP000030397    UP000248397    UP000279457    UP000032862   
Interpro
IPR029055   Ntn_hydrolases_N       
SUPFAM
SSF56235   SSF56235       
PDB
5HFT     E-value=9.06878e-82,     Score=774

Ontologies

Topology

Length:
526
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.525449999999999
Exp number, first 60 AAs:
0.49912
Total prob of N-in:
0.02665
outside
1  -  526
 
 

Population Genetic Test Statistics

Pi
273.317873
Theta
195.489288
Tajima's D
1.212182
CLR
0.000362
CSRT
0.71886405679716
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
28556443 AAANQIIVCR 100.00 4e-04
28556443 DLNVSSEFR 100.00 0.006
28556443 TGILWQNR 100.00 0.015
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