SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05319  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA002519
Annotation
PREDICTED:_tolloid-like_protein_1_[Bombyx_mori]
Full name
Metalloendopeptidase      
Location in the cell
Nuclear   Reliability : 3.41
 

Sequence

CDS
ATGAATATTCATAGCGCACCTATCGTAAACCGCCATGTCCAATACCGGCTGTGAAACTTCCAAGGTGACATTGCGATCCCGGATTCAGATCTTTATAAAACGGCGACTAGCCCTCCGGTCAAGATCGACAAGTCCTTCCAAGAAGAAGTTGAACGACTGAAGAAGGAGGTTCTGCTCGAAGGTCTACAGGTCGAGGAGGAAGGTCTTCCGGATATATTAAGGAAAAGGACAAAACAGCCCGTCCAACTATCTCAAGACAAGAAGGGTTACAATGACGCGGCACTTATGAGTGAGTCACTACCAGAAGGAGTAGACAAGTCGCTTGTGCTCAAAAACGGCAAGCTACTTCCAGAAGAAATCCTAGATAACAGTACAGAATTTAACGAAACCAAATCCGATGTGCACATTGCAAACAGGTCCAGCGTAGAGAACATTTCCGAATCTGAGAGCCTAGAGCAAGACGGCGTACTGGTTGTAAACATATCTACTGACAACATCCTCAATTTGGACGAACTGTATCCTTTTATTCAAATATCAAATGCCTCAAGGAAACAGGACGAAAAGACAAATAAAATCCAGAGCAACAGCCGAGAAATAACAGGAGATTCAAACAATATACAGTTCAAAGACATACCAGAGAACGTGACGATGGCTCCTGCTCCCACAAATGGTTTTTTATCGAACAGCGACCAAGACGACGAAAAGGAAATCAATAAAACTGAACGGGAATTAAAAGTTAAGAATATTGATTTATTGAAACCCACAGAAAGCTTGCAAAATTTGACTCTCGAGAATCCAGGAAGAAGGAATCGAAGAAGACGCAGACACGGCAATCGAAGAAGACTAAGAAACATAAGTTCGGGCGAAAGGATTTCACCGAATTCACTAAGCGAAGGACGCTCCTTAGACGACCATTTCGCGAGAAAGAAGTTTTTTCGTCACCACAAGAGGCACAGCGGCAGCAAAGAGTACAGGAGCTCGGAAAGGAAACTCGAAGTACCGGAACACGAATTTGAAGATAAGTTCGAAGTGAAACCGCCGCCGAAAAATCTAACGGAATTCGATCCGTTTAAAGACATGGTCTTTCGGGACACCGAAGAAGATTTAATGATGGCCGAAAGTAACCAGTACAATTCCACCGGGCCTAAAAAGCGACACCGCACGATCCGGGCCGCCACAAACCGTAAGGAACGTATCTGGGACAACGGTGTCATTCCTTACGAGATAGATGGAAACTTCAGTGGCGCCCACAAGTCATTATTCAAGCAAGCTATGAGGCATTGGGAGAATTTTACTTGCGTCAAATTTGTCGAAAGGGATCCAGAAGTGCATAAGGATTACATTGTGTTCACGGAACGGCCTTGTGGCTGCTGCTCATTCGTCGGCAAAAGGGGCGCAGGCGCCCAGGCTATATCAATTGGGAAGAACTGCGACAAATTCGGCATCGTGGTTCACGAGCTGGGCCACGTTGTCGGCTTCTGGCACGAGCATACGAGGCCCGACAGGGATAACCACGTGCAGATCATACGGGACAACATCATGCTCGGCCAAGAATACAATTTCAACAAGCTAACAGTTGAAGAAGTAAATTCACTAGGACAAACGTACGATTATGATTCAATAATGCATTACGCACGAAACACGTTCAGTAAAGGATCATTTTTGGACACTATCTTGCCGTTGGAGGTGCACGGAAAGAAACGACCAGAGATCGGGCAGAGAATCAAACTTAGCGCCAGTGACATAGCGCAGACTAATCTATTATATAAATGTGCCAAATGCGGCAGGACATTATTGGGCAACTCTGGGTGGTTCAACTCGCCTGGCTGGGGAACCGAGCCAGCGCCCACAACACCAGAACGTTGCGAGTGGAGGATCGTGGCTACTCACGGAGAAAGGGTCGTGCTCAATATCACTGAAATTGACATTCACAAGTCTGAAGACTGCCGTTCGGAGTGGGTTGAAATACGAGACGGCTATATGCCCGACGCTCCAGTTTTGGGCAGGTTGTGCGGGTCCGGAAAGGGTCCTATGATGAGGTCTACTGGATCAAGACTCACTGTGGTCTATCAACCGGGCTTGAGGCTTAAGCCGCATAGAGGATTCCGAGCATTCTACGAAGCCGTTTGCGGAGGTGATATAGAAGTGGATTCGAATGGACACCTCGAATCGCCGAACTATCCTGACGATTACCAGCCTAACAAACTATGTATCTGGAAACTATCAGTACCACAGGACTACCAAGTTGCTTTGAGGTTCCATTCGTTCGAAGTGGAAAACCACGATACATGCTCCTACGACAAAGTCAAGGTCAGAGACGGCGATTCAATGGACAGTCCACTTATCGGCATGTTCTGTGGACATAAGATACCTCCCGATATAAGGTCCACATCGAACAAGCTTCTGGTGATTTTCGAGTCGGACAGCACAGTCCAGAAAGCTGGTTTTTCAGCCACGTTCATGAAGGAATTCGACGAATGCGCTTCCATCGATCACGGCTGCAGCCACTCCTGCGTGAACACCCTCGGTGGATACGAGTGCGCGTGCGACATCGGATATGAACTCCATTCGGACGGAAAGAAATGTGAAAACGCATGCGGAGGAGCACTCTACGGCCCCAACGGTACGATCACATCACCTTCCTTCCCCGAACTGTATCCTCCGTTGAAGAACTGCCTCTGGGAGATCGTGGCGCCGCCCCAGCATCGCATTACGCTGAACTTCACACATTTCGACTTAGAAGGGAACCATATGTATCAACAGGAATGTGAATATGATAGTGTAACAGTACATTCGAAGCTAGGAGCTGATGTGCTCAGGAGGCACGGAGCGTTTTGTGGGACCGCCTTACCACCACCGGTCACTTCGGATGGATCGGTTTTGAGAGTTCAGTTCACATCAGACGGCTCGGTCCACCGGTCCGGTTTCGCGGCAGTGTACTACATAGACGTGGACGAATGCGCCGAGAACAACGGGGGATGTCAGCACGAGTGCCACAACACGCTGGGAGGATACGAGTGCGCCTGTCACAGCGGCTTCACTTTACATCCGAACAAGCACGACTGCAAGGAAGGCGGATGCAAGCATGACGTTACATTACCCCACGGAACTATTTTCAGTCCGAATTATCCGGCCGCGTACCCAGCAAGGAAAGATTGCGTTTGGCAATTCTCTACGACACCCGGTCATCGAATTAAACTGATCTTCAACGTCTTCGAATTAGAGCCTCACCAAGAATGCGCTTACGACCACGTCACGATCTACGACGGAGCTTCGGCCGACGTAAAAACGCTCGGCATATTCTGCGGCAGTAAGCTCCCGCATCTGGTCATGGCATCTCAGAACCAGATGTACATGGTATTCAAGAGTGACGGCTCTGTGCAGAGAAAGGGATTCTTGGCTACGCATTCTACTGCATGTGGAGGGTATCTCTCTGCGACGGAAGAGGTGAAGCATCTCTATTCTCACGCGCGCTACGGAGACAACGCCTACGAGTCCCGGGCTGATTGCGATTGGAACATCGAAGCTCCACGCAATCACTTCGTTAAGCTCACCTTCCTGACCTTTGAGCTGGAGAGGGAAGCGAACTGCAGATACGACTACGTCCAAGTGTTTGGTGGTTTGGGAGGAAGCGGCGGGAACTATGGAACGTTCTGTGGTATTAAGATGCCACCTGAAATCGTATCAACCTCAGAGGCCTTACTAGTCAGATTCCGTACCGACGATTCCTTGGTCTTCAAAGGCTTTTCGGCATCGTATCAGATGGTAAAACCGACTTGGAGCGACGAAGACAGCTTGGAAGGCGGAGAATATGAGGCTGAGGAGGAGGACGAGCGCATGCCTCCCCTGGTGCTCAAGACTTGA
Protein
MNIHSAPIVNRHVQYRLXNFQGDIAIPDSDLYKTATSPPVKIDKSFQEEVERLKKEVLLEGLQVEEEGLPDILRKRTKQPVQLSQDKKGYNDAALMSESLPEGVDKSLVLKNGKLLPEEILDNSTEFNETKSDVHIANRSSVENISESESLEQDGVLVVNISTDNILNLDELYPFIQISNASRKQDEKTNKIQSNSREITGDSNNIQFKDIPENVTMAPAPTNGFLSNSDQDDEKEINKTERELKVKNIDLLKPTESLQNLTLENPGRRNRRRRRHGNRRRLRNISSGERISPNSLSEGRSLDDHFARKKFFRHHKRHSGSKEYRSSERKLEVPEHEFEDKFEVKPPPKNLTEFDPFKDMVFRDTEEDLMMAESNQYNSTGPKKRHRTIRAATNRKERIWDNGVIPYEIDGNFSGAHKSLFKQAMRHWENFTCVKFVERDPEVHKDYIVFTERPCGCCSFVGKRGAGAQAISIGKNCDKFGIVVHELGHVVGFWHEHTRPDRDNHVQIIRDNIMLGQEYNFNKLTVEEVNSLGQTYDYDSIMHYARNTFSKGSFLDTILPLEVHGKKRPEIGQRIKLSASDIAQTNLLYKCAKCGRTLLGNSGWFNSPGWGTEPAPTTPERCEWRIVATHGERVVLNITEIDIHKSEDCRSEWVEIRDGYMPDAPVLGRLCGSGKGPMMRSTGSRLTVVYQPGLRLKPHRGFRAFYEAVCGGDIEVDSNGHLESPNYPDDYQPNKLCIWKLSVPQDYQVALRFHSFEVENHDTCSYDKVKVRDGDSMDSPLIGMFCGHKIPPDIRSTSNKLLVIFESDSTVQKAGFSATFMKEFDECASIDHGCSHSCVNTLGGYECACDIGYELHSDGKKCENACGGALYGPNGTITSPSFPELYPPLKNCLWEIVAPPQHRITLNFTHFDLEGNHMYQQECEYDSVTVHSKLGADVLRRHGAFCGTALPPPVTSDGSVLRVQFTSDGSVHRSGFAAVYYIDVDECAENNGGCQHECHNTLGGYECACHSGFTLHPNKHDCKEGGCKHDVTLPHGTIFSPNYPAAYPARKDCVWQFSTTPGHRIKLIFNVFELEPHQECAYDHVTIYDGASADVKTLGIFCGSKLPHLVMASQNQMYMVFKSDGSVQRKGFLATHSTACGGYLSATEEVKHLYSHARYGDNAYESRADCDWNIEAPRNHFVKLTFLTFELEREANCRYDYVQVFGGLGGSGGNYGTFCGIKMPPEIVSTSEALLVRFRTDDSLVFKGFSASYQMVKPTWSDEDSLEGGEYEAEEEDERMPPLVLKT

Summary

Cofactor
Zn(2+)
Feature
chain  Metalloendopeptidase
EC Number
3.4.24.-
Pfam
PF07645   EGF_CA        + More
PF00431   CUB
PF01400   Astacin
Interpro
IPR001881   EGF-like_Ca-bd_dom        + More
IPR024079   MetalloPept_cat_dom_sf       
IPR000859   CUB_dom       
IPR035914   Sperma_CUB_dom_sf       
IPR034036   ZnMP_TLD/BMP1       
IPR000152   EGF-type_Asp/Asn_hydroxyl_site       
IPR015446   BMP_1/tolloid-like       
IPR018097   EGF_Ca-bd_CS       
IPR001506   Peptidase_M12A       
IPR013032   EGF-like_CS       
IPR006026   Peptidase_Metallo       
IPR000742   EGF-like_dom       
IPR009030   Growth_fac_rcpt_cys_sf       
IPR013087   Znf_C2H2_type       
SUPFAM
SSF49854   SSF49854        + More
SSF57184   SSF57184       
Gene 3D
PDB
3EDI     E-value=1.00401e-83,     Score=795

Ontologies

Topology

Length:
1287
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00780999999999999
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00000
outside
1  -  1287
 
 

Population Genetic Test Statistics

Pi
255.18082
Theta
162.262867
Tajima's D
1.589796
CLR
0.501889
CSRT
0.806359682015899
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
26280517 HAIPAGFVIK 95.45 2e-09
24402669 HDVKPTIKPASK 95.45 2e-09
24402669 KDAHITIEMANK 100.00 5e-04
26280517 DCTCYNDGQIVKPGGVTESGCIK 100.00 0.002
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