SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05315  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA002514
Annotation
PREDICTED:_uncharacterized_protein_LOC105842325_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 2.76
 

Sequence

CDS
ATGACGACTGTGAACCGACAAAGAGTTCCCATCGCCTTCAGGCCAGGGGTCAACTTGCAGAGGTACTGGAACCAGCAGCTTGTAGCACCGGCCGCATCGCAGAGAGTGCCTTACGTCGTATACAGGAATTCACCTCACAGATTCGCAGTGAAGCACTACACGCCAACACACCGCAACGTGCACCAGGGTTCGTGGAAGACAACGGCTCGATTGCCGGCGGCGTCATCCACCACTGCGTTCGATTTCTTGAGGGCAGCTTCAGCGCCACCCGTCAGCAACAATGGTGGTGCAATACACACTATACCAGCGCCAAACCTCAGTCTTTCGGAGAAGCCAATAATCGTTGTTGACGCTTCAGAAACCGTCTCAAACGGTAACACTGTCTCACAGCCGCCTAAGCCGATTTACGAAGTAACGGAACAATATCCAGAGCCAGAATACCACATGGCTAAAATAGAAACTCCCATAGGATTTTCAAAGACGAAAACGTCTTCGAACGCACCAGAGCTACAAACTTTAATCAGAGAGGCAGCAGCCCTGCAGGTTGCTTCACAGTACGGCATTTCGCCAATCAGTGCACCACAAAACGGACACGTCATCCATCAACATATACCAGTACAGCCATTCAACGGAATCCCGACGCAACAAGACTTAATAAATTCAGGAGCGGAAGGTATAGTAATACCTCCAAATGCCTTATACCAGCCCGATCCGATGTTCTTACAAAAATTACAAAGCCAGATAATACAAAGTTTTCCGTCAGTTGAATTCATACCTTATTCCGCTGAACTTCCACCAGCAAATCCGCAAATCGAAATAAAACCGCAACTAATTTTATTGGAAAACGACGAGATAAAACAAGAGCCGTCCTCTTTTGTACCAATGTACCAAAAGAATTTGGTACAGAGGGATACTCAAGAAAGCTCTGCCGTTACATTAATTCCTCAAGCGATTGTGGTCTTTAACGCAACAGACAAAAGCAATTTGATGTCAGCATCAAATACCACCGGGGATTTGATAGCAGAGGCATCTCAACCAATAACAACAACAATCAAATACATTGCTGACCCTAATAGAGATCGACTGAACACGACTCCGATATTCTACGCCCAAATAGGACAGAGCATCGGCGATGTTATAGCAAAAGGATTTTATTCGGCCATAAATGACGTCAGAGCTGCAGCAGCGTTGGCTCAAATTGAAAAATTACCGGAATCTAATAGAATAGCCGATACTGCTGAAAACATTACAACCACAACCGTAAATCCAAATTTGGAACCGTACTTCGTGAAAACGAAAGAAGAGGGAAAGGATAATAAAACAGTCTCCGAATTAAAATCACTACTGGGAATGCCATTTAGCAAAACAAGTGATTCTGTAAACGTGGCTTATACTCTATTAAGAAGCGACACTAAAGAGCCAAAAATGACACAAGAAGGAACAGTGTATGCGGGTCAGATCGTCGAGGCCAGTGTAAGTGAAGACCAAGACTTTAATAACGAGAAAGCAACTTTAATGTCGAGGAGGGCTCCCATAAGACTTGTCGCTGTACCTGACCAAAAAGAAACTCCGTCTAAATCGACTAGTCAACAAGCATCAACGTCGAGCAGTGGACAAAAAGCAGCTGTAGTCAAAGCGCGAATACCACCAAAGAGCAAAATCGTTTTTGACGATAACACAGGGGAACCCATTTTGAGGATATATGCAAGTTATGCCAACAATCCCACGCAGAAAGAATCAATCACAACAAAATTACAAAGTTTAAAACACGTAAAAGATGCCGCAACACGTAAAGAGATTTCGGAGAACTGGAAATCGCCGACTCTTAAATCTGTGGACAAAACTCAAGGTTTCGAAGGAAACCAAGTGACGGAATTCGGTTTGAAATTGAAAGCGCGTAATGATCAGTACATACCGCTCTTCGAAGAATATGATGAATAG
Protein
MTTVNRQRVPIAFRPGVNLQRYWNQQLVAPAASQRVPYVVYRNSPHRFAVKHYTPTHRNVHQGSWKTTARLPAASSTTAFDFLRAASAPPVSNNGGAIHTIPAPNLSLSEKPIIVVDASETVSNGNTVSQPPKPIYEVTEQYPEPEYHMAKIETPIGFSKTKTSSNAPELQTLIREAAALQVASQYGISPISAPQNGHVIHQHIPVQPFNGIPTQQDLINSGAEGIVIPPNALYQPDPMFLQKLQSQIIQSFPSVEFIPYSAELPPANPQIEIKPQLILLENDEIKQEPSSFVPMYQKNLVQRDTQESSAVTLIPQAIVVFNATDKSNLMSASNTTGDLIAEASQPITTTIKYIADPNRDRLNTTPIFYAQIGQSIGDVIAKGFYSAINDVRAAAALAQIEKLPESNRIADTAENITTTTVNPNLEPYFVKTKEEGKDNKTVSELKSLLGMPFSKTSDSVNVAYTLLRSDTKEPKMTQEGTVYAGQIVEASVSEDQDFNNEKATLMSRRAPIRLVAVPDQKETPSKSTSQQASTSSSGQKAAVVKARIPPKSKIVFDDNTGEPILRIYASYANNPTQKESITTKLQSLKHVKDAATRKEISENWKSPTLKSVDKTQGFEGNQVTEFGLKLKARNDQYIPLFEEYDE

Summary

Ontologies

Topology

Length:
646
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00409000000000001
Exp number, first 60 AAs:
0.00078
Total prob of N-in:
0.00204
outside
1  -  646
 
 

Population Genetic Test Statistics

Pi
167.547244
Theta
158.942399
Tajima's D
0.006782
CLR
201.406858
CSRT
0.365681715914204
Interpretation
Uncertain
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