SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05313
Pre Gene Modal
BGIBMGA002513
Annotation
PREDICTED:_uncharacterized_protein_LOC101736774_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 2.726
 

Sequence

CDS
ATGGTGTCACCGGCGCCCACCGAGCCCCTCTACCTGGACATCATAGACATGGCCGCCATCAGCAGGATGTCGCCGCAACAACTCGAAGCGCTCGCCGAAGGTCTTGCCGCCGAAGAGATAATGAGGACAAAGAGATCGTCAGCCCAAGCGCTGACGTCAGTCGTGTCTAAAGCGTCATCGGGTCTACAGAGTAAAGTTGGCTTGCTGGGCCAAGCCTCGGCCTTCATATCGTCCGCTTCGAGTAAGACCGGAGGTGACCACGGAGGATACTCTTATGAACCCCCCCAGCAAGGTGAAAAATACGATTTCTTGGGCCTGAAGAAGTCAATTCTTTACACTCTTTTCCAAGCCGTCAAAGCCATTACCGGTGGAGTGACGATTTTGAAAGGACAGCTCATTAAGGGCGGCGGCGCCTTGGCTTCCACGCTGGGCAAGGTCATTGCCGTAAAGGGTGATGCTGTGAGCAACCTCGGAAAGAAAATAGTCAGCTCGGCAGCGCTGAGTGAGAAGAAGCCTGTTTCGACACCAGTATACGGTCCACCACCAACCTCACACCTCGAGTACGGCCCGCCACCATCCGCATACGGAGCGCCCACGGCTCCAGCGCACTACTCCCACACCGCACCAGCCCTGCCCACAGGGTACGCGGCCCACAAATACCCAGCCCACTTGGACGGGCGAGGTAAACTGAACGGCGTGCACGCCGGACTTGTGATACTGACGCCTCTTGGAGACGGATCGCCCGGAGAGACACTCGACACGGCGCACTCTGGCCACACGCCGCTAGAACCTCCCCAGTCTATCCTCCACACGGTCTACAACGCTGTTAAAAGCGCTTTCTCAACCGCCCCCTCTCAATCAGAGCCTCTTCCACATCAAGCCCCTCCACCGCTCCAAACTGTTCCCGCTTTCAAACCCATGTCATGGGGTAACGTCAATTCTTATGGCGAGCCCGCCACGGCTGAAGGATATACAGACTATGTGCCGCACAATCCCCAGTCTCCATACGACTACGCTGCAGCTAAGCATTCCGTCGTTTCAGAGCCTAAAGGTCTGACGCCAGAGAAAATCCAGAAAATAAACAACAACCTGAGCAAAGTACAGGCGTATTTAAATCAGAAAAAGAGATCGTTAGAGGAAGGTCCGAGCTTTAACGGCCTCGAAAAGTACAAGGATCTGTTAAAAACGGGCCAGGTGCCTTTCCTGCCAACTCCTGTAGTATTTGACAATGAGATCGGTGTGCTGCCGGCCGAATTACTCCCTGATTCCGTTACCACCACATCCACCACTTCCACCACTAGCACAACGCCGAGTACCACGACGGTAGCCCAGAGTACGACAGCGAACAGAAGAAAGGACGTGAAGTACATCCTTCGTGGCAACAGGATCGTCCAAGTTTGA
Protein
MVSPAPTEPLYLDIIDMAAISRMSPQQLEALAEGLAAEEIMRTKRSSAQALTSVVSKASSGLQSKVGLLGQASAFISSASSKTGGDHGGYSYEPPQQGEKYDFLGLKKSILYTLFQAVKAITGGVTILKGQLIKGGGALASTLGKVIAVKGDAVSNLGKKIVSSAALSEKKPVSTPVYGPPPTSHLEYGPPPSAYGAPTAPAHYSHTAPALPTGYAAHKYPAHLDGRGKLNGVHAGLVILTPLGDGSPGETLDTAHSGHTPLEPPQSILHTVYNAVKSAFSTAPSQSEPLPHQAPPPLQTVPAFKPMSWGNVNSYGEPATAEGYTDYVPHNPQSPYDYAAAKHSVVSEPKGLTPEKIQKINNNLSKVQAYLNQKKRSLEEGPSFNGLEKYKDLLKTGQVPFLPTPVVFDNEIGVLPAELLPDSVTTTSTTSTTSTTPSTTTVAQSTTANRRKDVKYILRGNRIVQV

Summary

Pfam
PF16077   Spaetzle
Interpro
IPR032104   Spaetzle        + More
IPR029034   Cystine-knot_cytokine       
SUPFAM
SSF57501   SSF57501       
Gene 3D

Ontologies

GO

Topology

Length:
466
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0536200000000001
Exp number, first 60 AAs:
0.00012
Total prob of N-in:
0.00282
outside
1  -  466
 
 

Population Genetic Test Statistics

Pi
278.576573
Theta
177.650892
Tajima's D
2.062432
CLR
0.40188
CSRT
0.895155242237888
Interpretation
Uncertain
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号