SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05310
Annotation
NA
Location in the cell
Extracellular   Reliability : 1.838
 

Sequence

CDS
ATGGTCGTGCTTTTGTTTGTTATTACACTGCTCTCGGCGCTCTCCACAACAACCATACATGCAGCACGAATTTTGAGGATAAAGAAACCCCTGAAATACGAAATCGAATATCAAGAAAAAATCGATAGAATACTAACAGGATCAAAGGACTGGAAATATTTTGATCCAGAAACATATTCTGATGAAGCTGGTCAAAACAGTACGGGAATAATAGGAGGCTGTCACTGGATTACAGAGGTGGAAATTTATTATATGTTGGAAGATCTCTCACGCAATAAATCATGGCCGATTGTTCAGTCAAAGTATTTACAACAGAAAATTAAAACAACTCGCTGCGTGAAAACCAAGGAATCCTGCTACGAAGAATTCGGTTTGAATAAATTAGGATTGTCGTCCGTGTGCAAAGAAAGTTATCGCCTCAACAAAATTTACTTCTACGATCCCGACCGAAATATGATCTATACAAAAAAGATGACTATACCGTACTGCTGCACCTGTACTATCCTTAAAGAAAACCCTGTCCAAGACTATCAATGCTTAAAAACCTAA
Protein
MVVLLFVITLLSALSTTTIHAARILRIKKPLKYEIEYQEKIDRILTGSKDWKYFDPETYSDEAGQNSTGIIGGCHWITEVEIYYMLEDLSRNKSWPIVQSKYLQQKIKTTRCVKTKESCYEEFGLNKLGLSSVCKESYRLNKIYFYDPDRNMIYTKKMTIPYCCTCTILKENPVQDYQCLKT

Summary

Interpro
IPR029034   Cystine-knot_cytokine       
Gene 3D

Ontologies

GO

Topology

SignalP
Position:   1 - 21,         Likelihood:  0.985117
 
 
Length:
182
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
19.6965
Exp number, first 60 AAs:
19.67813
Total prob of N-in:
0.78347
POSSIBLE N-term signal
sequence
inside
1  -  1
TMhelix
2  -  24
outside
25  -  182
 
 

Population Genetic Test Statistics

Pi
221.98885
Theta
170.852554
Tajima's D
1.257627
CLR
0.394739
CSRT
0.732213389330533
Interpretation
Uncertain
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