SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05308
Annotation
PREDICTED:_uncharacterized_protein_LOC101738945_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 1.452 Nuclear   Reliability : 1.765
 

Sequence

CDS
ATGAATGTGTTTCTTGAACAGCCACCTACACAGGTGTACGAAATTGAAGACGAGAACGGCATCATTCGGTTCGTTGTTCAAGATGAGAAGTTTAAGCAAATCGTGAACGTCATTAAGTGCAGTGACGAAGGGAACATCACGAGGTCGTCTGATATATACGAAAGATCTTATTTCGCTTACGGAGCATTGATAAGCTACAGCCTGACGTGTAGACAGGTAACAATTGATTTCAAGTTCCTGGTGCTCAGTATAGACGGGCAATCACTCGACACAGCTTCCGTAAGCGGAGGACTGCCAGTCTGTTGCTCTTGCAATGTGGAGAGAAAAAATATTAATAATTTTAGCGAATCGTGTTCGAATCAAACCATCGAATCAAACCATACTTAG
Protein
MNVFLEQPPTQVYEIEDENGIIRFVVQDEKFKQIVNVIKCSDEGNITRSSDIYERSYFAYGALISYSLTCRQVTIDFKFLVLSIDGQSLDTASVSGGLPVCCSCNVERKNINNFSESCSNQTIESNHT

Summary

Pfam
PF16077   Spaetzle
Interpro
IPR029034   Cystine-knot_cytokine        + More
IPR032104   Spaetzle       
SUPFAM
SSF57501   SSF57501       
Gene 3D

Ontologies

GO

Topology

Length:
128
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.43865
Exp number, first 60 AAs:
0.10823
Total prob of N-in:
0.07474
outside
1  -  128
 
 

Population Genetic Test Statistics

Pi
187.093001
Theta
156.26047
Tajima's D
0.670207
CLR
1.636875
CSRT
0.576471176441178
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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