SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05304
Annotation
PREDICTED:_uncharacterized_protein_LOC101738945_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 2.246
 

Sequence

CDS
ATGGAACTATTATCTCGGCAGGGTTGGGGAATAGCCGACGCGATCAGGGTGTTCGGTCATCGACAAGGTAGCTTCATGGAAATCTGCAAATCTAAGATACTGCCACCTACACAGGTGTACGAAATTGAAGACGAGAACGGCATCATTCGGTTCGTTGTTCAAGCTGAGAGGTTTAAGCAAATCGTCAACGTCATTAATTGCAGTAACGAAGGAAACATCACGAGGTCGTCTGATATATACAGGAGATCTTATTTCGGATACGGAGCATTGAGAAGCTACTACGTGACGTGTAGACAGGTTACCATTGATTTCAAGTTCCTGGTGCTCAGTATAGACGGACAATCACTCGACACCGCTTCCGTATACGGAGGACTGCCAGTCTGCTGCTCTTGCTATGTGGCGAGAAAAAATATTAATCATTTGAACGCATCGTATTAA
Protein
MELLSRQGWGIADAIRVFGHRQGSFMEICKSKILPPTQVYEIEDENGIIRFVVQAERFKQIVNVINCSNEGNITRSSDIYRRSYFGYGALRSYYVTCRQVTIDFKFLVLSIDGQSLDTASVYGGLPVCCSCYVARKNINHLNASY

Summary

Pfam
PF16077   Spaetzle        + More
PF05649   Peptidase_M13_N
PF01431   Peptidase_M13
Interpro
IPR029034   Cystine-knot_cytokine        + More
IPR032104   Spaetzle       
IPR042089   Peptidase_M13_dom_2       
IPR008753   Peptidase_M13_N       
IPR024079   MetalloPept_cat_dom_sf       
IPR000718   Peptidase_M13       
IPR018497   Peptidase_M13_C       
SUPFAM
SSF57501   SSF57501       
Gene 3D

Ontologies

Topology

Length:
145
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.15061
Exp number, first 60 AAs:
0.00016
Total prob of N-in:
0.06574
outside
1  -  145
 
 

Population Genetic Test Statistics

Pi
322.268131
Theta
167.764617
Tajima's D
2.941189
CLR
0.351822
CSRT
0.974851257437128
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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