Gene

KWMTBOMO05302

Pre Gene Modal

BGIBMGA002397

Annotation

spatzle-1_precursor_[Bombyx_mori]

Location

Bomo_Chr9(-):13431883-13450557      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.13

CDS

ATGTCAATATCGGCCTACAAATACAGACAGAATGACCAGCAGGATTCGCCTCACAGTCACCCACAGAAATATCTGGCAGATGAACCGAATCGCATGAGTGAAAGGTCGATTCACAACACAGACCACAACCAAAGACTACAATCGAGGAGTTCAACGAAAATCGAGGAAGCATCCCGAACTGAAAATGGAACTTTCAAGATCTTGAACAAACCATTCTCGATACACAGACGATTTGCTCAAACGGACGACTCTCCGGGAGACAGGGTGGTGTTCCCGGGGCTGACCTCAAGGTCAGGCGTAAACCCATACGTCCCAGAAATCCCGGAGTCGTGCAAGAAAATTGGCATCTGTGACAAGATACCGAATTACCCAAGAGAACAAGTAGAAAAGATCGTTGCTAAGTTGGGCGAGAAAACAGAGTTTCAATTCGACAAACTGGACTTACCTTCGATACCGGATATCGCCCAGCGGGCAGGCTCATTCGAAGACTCGTACGAACTATGTGACTTTAGAGTTCAGATTATGACTCCACTGGCAGCTCAATCGGATGATCTCAAATGGTACCATGTATTGAATTTTAACGAAAATCCACTACAAGGTTTCAGGGTCGAGATATGCAACACTACGAGTACCGGTTGCGCGAAATTCGTGACGATGGAAAATAACTACAATCCGAAATGCGTTCAGAAGTTTATATTCAGAAAAATGAAGATCCTAAGCGAAAGCGGCGAAATGATCGAGAGGTCCATGAAAGTTCCGAGCTGTTGTTCGTGTGTTGCCACGCTACTCGGTTAA

Protein

MSISAYKYRQNDQQDSPHSHPQKYLADEPNRMSERSIHNTDHNQRLQSRSSTKIEEASRTENGTFKILNKPFSIHRRFAQTDDSPGDRVVFPGLTSRSGVNPYVPEIPESCKKIGICDKIPNYPREQVEKIVAKLGEKTEFQFDKLDLPSIPDIAQRAGSFEDSYELCDFRVQIMTPLAAQSDDLKWYHVLNFNENPLQGFRVEICNTTSTGCAKFVTMENNYNPKCVQKFIFRKMKILSESGEMIERSMKVPSCCSCVATLLG

Uniprot

H9IYR3   C8BMD4   C8BMD3   C8BMD1   C8BMD2   A0A2A4J5Q9   + More
A0A212F1C3   I3RJG3   A0A3S2NVQ5   A0A194QS89   A0A2J7PUF4   A0A2J7PUG0   A0A232EEN3   K7IR18   A0A158NM41   A0A067R2D2   A0A0L7RHY8   A0A195B526   A0A1A9W9H9   A0A0M9A6I1   A0A1A9UTI1   A0A1B0G3N3   A0A151XIE5   A0A151IBP6   A0A336MQV2   A0A336MQL5   A0A2S2R099   A0A151JVF9   A0A1B6E680   A0A224XKB4   A0A1A9YGR1   A0A2K8JM91   A0A2K8JP28   A0A2H8TH37   U4U8J0   A0A0J7KDG5   A0A1B6JNK1   A0A0C9QZX1   A0A0C9RM54   A0A1B6LQM6   A0A088AM17   N6TMC1   C4WS62   C4WS64   E2AIM2   C4WS63   A0A1B6GPX2   A0A1B6L1I9  

Pubmed

19121390    19968713    22118469    26354079    28648823    20075255    + More
21347285    24845553    23537049    20798317   

EMBL

BABH01010977    GQ249946    ACU68555.1    ACU68556.1    GQ249944    ACU68553.1    + More
GQ249945    ACU68554.1    NWSH01003216    PCG66753.1    AGBW02010916    OWR47524.1    JQ687408    AFK24443.2    RSAL01000148    RVE45827.1    KQ461154    KPJ08388.1    NEVH01021198    PNF19962.1    PNF19963.1    NNAY01005273    OXU16803.1    ADTU01020227    ADTU01020228    KK852756    KDR17073.1    KQ414584    KOC70607.1    KQ976604    KYM79380.1    KQ435726    KOX78245.1    CCAG010005690    KQ982109    KYQ59980.1    KQ978079    KYM97162.1    UFQT01002196    SSX32904.1    UFQT01001436    SSX30567.1    GGMS01014141    MBY83344.1    KQ981730    KYN36602.1    GEDC01003848    JAS33450.1    GFTR01003509    JAW12917.1    KY031195    ATU82946.1    KY031032    ATU82783.1    GFXV01001631    MBW13436.1    KB631804    ERL86265.1    LBMM01009073    KMQ88412.1    GECU01006926    JAT00781.1    GBYB01009349    JAG79116.1    GBYB01009350    JAG79117.1    GEBQ01025092    GEBQ01013926    JAT14885.1    JAT26051.1    APGK01018756    APGK01018757    KB740082    ENN81604.1    AK340062    BAH70732.1    ABLF02022766    ABLF02022767    AK340064    AK340065    BAH70734.1    GL439840    EFN66711.1    AK340063    BAH70733.1    GECZ01020488    GECZ01005283    GECZ01005010    GECZ01002225    JAS49281.1    JAS64486.1    JAS64759.1    JAS67544.1    GEBQ01022476    JAT17501.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000283053    UP000053240    UP000235965    + More
UP000215335    UP000002358    UP000005205    UP000027135    UP000053825    UP000078540    UP000091820    UP000053105    UP000078200    UP000092444    UP000075809    UP000078542    UP000078541    UP000092443    UP000030742    UP000036403    UP000005203    UP000019118    UP000007819    UP000000311   

PRIDE

H9IYR3   

Pfam

PF16077   Spaetzle        + More
PF05649   Peptidase_M13_N
PF01431   Peptidase_M13

Interpro

IPR029034   Cystine-knot_cytokine        + More
IPR032104   Spaetzle       
IPR042089   Peptidase_M13_dom_2       
IPR008753   Peptidase_M13_N       
IPR024079   MetalloPept_cat_dom_sf       
IPR000718   Peptidase_M13       
IPR018497   Peptidase_M13_C       

SUPFAM

SSF57501   SSF57501       

Gene 3D

2.10.90.10     1.10.1380.10     3.40.390.10    

CDD

cd08662  M13

ProteinModelPortal

H9IYR3   C8BMD4   C8BMD3   C8BMD1   C8BMD2   A0A2A4J5Q9   + More
A0A212F1C3   I3RJG3   A0A3S2NVQ5   A0A194QS89   A0A2J7PUF4   A0A2J7PUG0   A0A232EEN3   K7IR18   A0A158NM41   A0A067R2D2   A0A0L7RHY8   A0A195B526   A0A1A9W9H9   A0A0M9A6I1   A0A1A9UTI1   A0A1B0G3N3   A0A151XIE5   A0A151IBP6   A0A336MQV2   A0A336MQL5   A0A2S2R099   A0A151JVF9   A0A1B6E680   A0A224XKB4   A0A1A9YGR1   A0A2K8JM91   A0A2K8JP28   A0A2H8TH37   U4U8J0   A0A0J7KDG5   A0A1B6JNK1   A0A0C9QZX1   A0A0C9RM54   A0A1B6LQM6   A0A088AM17   N6TMC1   C4WS62   C4WS64   E2AIM2   C4WS63   A0A1B6GPX2   A0A1B6L1I9  

PDB

4BV4     E-value=0.00010402,     Score=106

KEGG

100136938    K20694 protein spaetzle | (RefSeq) SPZ1, BmSpz1, Spz; spatzle-1

PATHWAY

04624    Toll and Imd signaling pathway - Bombyx mori (domestic silkworm)

GO

GO:0016021   GO:0004222  

PANTHER

PTHR11733  

Length:

264

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00014

Exp number, first 60 AAs:

0

Total prob of N-in:

0.16103

outside

1  -  264

 

 

Pi

242.658877

Theta

165.109938

Tajima's D

1.522151

CLR

0.385647

CSRT

0.79686015699215

Interpretation

Uncertain