Gene

KWMTBOMO05293

Pre Gene Modal

BGIBMGA002506

Annotation

PREDICTED:_neuropeptide_receptor_A24_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr9(+):13100483-13116502      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.972

CDS

ATGACAGTTCTTAGGACGGAGGCACCGCTCTTCAAGAAGGCTGGTTGACGTGCTGTCAACGTCAAACCTCCTTGGGTTATATCTCCTGTAGTATTTATTATATGTCCACCGCAACGTGCCGTTTTTATTTTTATTGCCTTTGTAGGCAGACGACCATACGACCCAAACGATGGTCCCGATGCTATGATGCTGGACGAGCTCGGGCCAACCGTGGCCTCCAACCAGTCAACCTCGCTAGCGGATCTCGATAGCTTCTACGTCACGTTCTACGATGTCGAAAACGAGAGATATGTTAACGATTCGCAAAACGCAACCGAGCCATTCCAATCCTTCATCCTGCCGTGGTGGAGGCAGATTCTGTGGACGGTGCTTTTCGCTGGGATGGTGGTCGTCGCCACCGTGGGAAACCTGGTTGTCATCTGGATAGTGCTCACCAATAAGCGGATGAGAAGCGTCACCAATTACTTCTTGGTGAATCTATCGGTGGCCGATGCAATGGTGTCGACCCTTAACGTCACCTTCAACTTCACGTACATGCTGAACTCCAACTGGCCCTTCGGACATTTCTACTGCAAATTCTGTCAGTTTATAGCGGTACTGAGCATCTCTGCGTCTGTCTTCACGCTCCTTGCGATCAGCGTTGATCGCTACGTCGCCATCATGAGTCCGCTTCAGCCGCGTCTCGGCAAGAGAGCGACCCTCGGCATCACCGCAGCCATCTGGGCGTGGAGCTCCTTCATCAGCAGCCCCAACCTCATTTACTTCACAACTGAAAACGTCTCCTTGCCCGACGGAACTATCAGATGTGTTTGCTACTCCCATTGGCCAGACGGTATGACGACTAGATCTCGCTTAGAATATGCGTACAATGTGTTGTTCATGGTGCTGACATACTTCATGCCCATAATAGCGATGACCTACGCATACTCCAGGGTCGGGGTGGAGCTGTGGGGATCGCAGTCTATTGGAGAGTGCACGCAACGACAGCTAGACAATGTAAAAAGCAAACGACGGGTCGTTAAAATGATGATCGTTGTGGTCGTCATCTTCGCTGTCTGCTGGTTACCGTTCCATGTTTACTTTGTGGTAACATCGTACTATCCTGATGTTGTGAGCTACCCGCATATTCAAGAAATCTACTTGGGTATTTATTGGCTGGCGATGAGTAACTCGATGTATAATCCCATCATTTATTGCTGGATGAACTCAAAATTCCGACGAGGCTTTAAGCAGTTCTTCTGGTGTTGTGGTGCTTTCGGTGGTGGTGGCCTCGCCAGGCACAGGGCTCTGGGACCAGACAGGACGGATAGATCCATGCGCTCCCTCTCACCCAGCCGAAAGAACGGAACAAGCACTATCCGGATTTCGATGCATAGCATGTACAACAACAACGCGTCGGTGTTTGCGGGATGA

Protein

MTVLRTEAPLFKKAGXRAVNVKPPWVISPVVFIICPPQRAVFIFIAFVGRRPYDPNDGPDAMMLDELGPTVASNQSTSLADLDSFYVTFYDVENERYVNDSQNATEPFQSFILPWWRQILWTVLFAGMVVVATVGNLVVIWIVLTNKRMRSVTNYFLVNLSVADAMVSTLNVTFNFTYMLNSNWPFGHFYCKFCQFIAVLSISASVFTLLAISVDRYVAIMSPLQPRLGKRATLGITAAIWAWSSFISSPNLIYFTTENVSLPDGTIRCVCYSHWPDGMTTRSRLEYAYNVLFMVLTYFMPIIAMTYAYSRVGVELWGSQSIGECTQRQLDNVKSKRRVVKMMIVVVVIFAVCWLPFHVYFVVTSYYPDVVSYPHIQEIYLGIYWLAMSNSMYNPIIYCWMNSKFRRGFKQFFWCCGAFGGGGLARHRALGPDRTDRSMRSLSPSRKNGTSTIRISMHSMYNNNASVFAG

Similarity

Belongs to the G-protein coupled receptor 1 family.

Uniprot

B3XXN7   A0A194QD73   A0A0S1YD94   A0A0N1IIB1   A0A212FGF7   A0A1W6DWG6   + More
A0A194QBY0   K7IMW9   A0A1S4FFA1   A0A1Q1MKF3   A0A0C9R7N6   A0A182IUE5   A0A1Y1KWU1   A0A1W4X208   B3P817   A0A1A9WB26   A0A1W4URD3   Q94736   A0A1I8PID0   A0A1I8PIJ9   A0A1A9YBP0   A0A1B0AVC6   N6SWL4   B4MBA0   A0A0P5MB51   A0A0P5C5B0   A0A0P5TYZ4   A0A0P6HJ58   A0A141CIT9   A0A1V9XSP4  

Pubmed

18725956    26354079    22118469    20075255    27923683    28004739    + More
17994087    9114446    10800964    11519074    12007570    12488971    12431738    23537049    26817786    28327890   

EMBL

AB330445    BAG68423.1    KQ459220    KPJ02925.1    KT031022    ALM88320.1    + More
KQ459927    KPJ19314.1    AGBW02008680    OWR52810.1    KY349132    ARK07245.1    KPJ02924.1    KX671126    AQM36731.1    GBYB01004040    JAG73807.1    GEZM01071336    GEZM01071335    GEZM01071334    GEZM01071333    JAV65883.1    CH954182    EDV53144.1    U52347    AAB07000.1    JXJN01004202    JXJN01004203    APGK01053965    KB741239    KB632275    ENN72174.1    ERL91142.1    CH940656    EDW58371.2    GDIQ01160728    JAK90997.1    GDIP01175284    JAJ48118.1    GDIP01120078    JAL83636.1    GDIQ01018944    JAN75793.1    KT232311    AKR03972.1    MNPL01004843    OQR76422.1   

Proteomes

UP000053268    UP000053240    UP000007151    UP000002358    UP000075880    UP000192223    + More
UP000008711    UP000091820    UP000192221    UP000095300    UP000092443    UP000092460    UP000019118    UP000030742    UP000008792    UP000192247   

PRIDE

B3XXN7   

Pfam

PF00001   7tm_1

Interpro

IPR000276   GPCR_Rhodpsn        + More
IPR001681   Neurokn_rcpt       
IPR017452   GPCR_Rhodpsn_7TM       

ProteinModelPortal

B3XXN7   A0A194QD73   A0A0S1YD94   A0A0N1IIB1   A0A212FGF7   A0A1W6DWG6   + More
A0A194QBY0   K7IMW9   A0A1S4FFA1   A0A1Q1MKF3   A0A0C9R7N6   A0A182IUE5   A0A1Y1KWU1   A0A1W4X208   B3P817   A0A1A9WB26   A0A1W4URD3   Q94736   A0A1I8PID0   A0A1I8PIJ9   A0A1A9YBP0   A0A1B0AVC6   N6SWL4   B4MBA0   A0A0P5MB51   A0A0P5C5B0   A0A0P5TYZ4   A0A0P6HJ58   A0A141CIT9   A0A1V9XSP4  

PDB

2KSB     E-value=6.8514e-63,     Score=611

KEGG

100174935    K04224 tachykinin receptor 3 | (RefSeq) NGR-A24, BNGR-A24; neuropeptide receptor A24

PATHWAY

04080    Neuroactive ligand-receptor interaction - Bombyx mori (domestic silkworm)

GO

GO:0016021   GO:0004995   GO:0005886   GO:0007186   GO:0004930   GO:0005524   GO:0001664   GO:0005525   GO:0016491   GO:0003824  

Length:

470

Number of predicted TMHs:

7

Exp number of AAs in TMHs:

175.84623

Exp number, first 60 AAs:

17.10578

Total prob of N-in:

0.74604

POSSIBLE N-term signal

sequence

outside

1  -  120

TMhelix

121  -  143

inside

144  -  155

TMhelix

156  -  178

outside

179  -  192

TMhelix

193  -  214

inside

215  -  233

TMhelix

234  -  256

outside

257  -  286

TMhelix

287  -  309

inside

310  -  341

TMhelix

342  -  364

outside

365  -  378

TMhelix

379  -  401

inside

402  -  470

 

 

Pi

21.300154

Theta

19.786975

Tajima's D

0.464038

CLR

0.754694

CSRT

0.509874506274686

Interpretation

Uncertain