Gene

KWMTBOMO05287

Pre Gene Modal

BGIBMGA002402

Annotation

PREDICTED:_sorting_nexin-4-like_[Amyelois_transitella]

Location

Bomo_Chr9(-):12801455-12811182      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.356 Nuclear   Reliability : 1.744

CDS

ATGTCTAAAGATAATACACCGGTCAAATCACCTAAATCGCCAAAAGCAATAAAAACAGTAGAAGACTTCGAAAATCAGGACACACTGTTGAAGCATGTCGATATAACTATTGTGGAGTCGGAGAAACGAGCTAATGGTACTCTACACGTCAGAGATCATTACACAGTATATCTCGTCGATTTAAAAGTTACAGATCCTGATTACAAATTAGTACAGTCAAAAATAAGCACAATCTGGAGGAGATACACTGAATTCGAACAAATACATGATTACCTACAAGTCACATATCCACATGTTGTTATACCTCCATTACCAGAGAAAAGGGTGCTTTACGCGTGGCGCAAATCGGACACTACAGACCCGGAGTTTGTGGAGCGCCGTCGAGCTGGCTTAGAAAATTTCCTATTACGAGTCGCATCTCACCCTCGACTATGTTTCGATGATCAATTCATTAATTTCCTACAAGAAGAACATGGTTGGCGGGAAACTATCACCGATAGTGGATATTTACTACAAGCTGAAAATAAAATAAAATCACTGTCCGTATCTATAAGGTTGAAGAAGCCCGATCCTGAGGTTGAGTCCTTCAAAAACTACGGGAAACAATTAGAAACTAATTTAGGAAACTTTTTATATACAAGATCCAAAATAATAGAAAAAAATTACGCTCTATGTAAACTGCACGCGAATTACGGCAAACTGTTTAGTGAATGGAGCGTCATCGAGAAGGAGATGGGAGACGGATTGCAGAAGGCCGGACATTATTTCGATTCAATAGCGGACAGTATAGATTCGGTTGCGGAAGACGAAGAACAGCTGGCGGACCAATTAAAAGAGTATCTGTTTTATGCGGGAGCTCTGCAGCAGCTGTGCAGCAATCATGAGGCTCTCCAACGAAACCTGGAACAGGCACAAGACACGCTCAATAATCGGTTAGCAGAACGCACCAGAGCGGCGGCGGGAAAATCCGGTATAATGTCCCGACTGTTTGGTACCACGGATCCTGATATAGTGCGGGACCAAACTACGCGAGCTCTCGACGCTAAGATACAAGCAGATAACGAAGCTATAGAAAAGGCTAAACTGGATTTGGAAGAATTCACAAAGAAAGTTATGGTAGAAATAGACCATTTCCAGAAGCAAAAAGATAAGGACTTGCACGAGTCGCTAGTAAATTTCATAACTTTACAAGTTAAAGCTGCGAAAAGGAATTTGCAAGCATGGACACAAATAAAAGAATGTCTACAGAATATGCCTTAA

Protein

MSKDNTPVKSPKSPKAIKTVEDFENQDTLLKHVDITIVESEKRANGTLHVRDHYTVYLVDLKVTDPDYKLVQSKISTIWRRYTEFEQIHDYLQVTYPHVVIPPLPEKRVLYAWRKSDTTDPEFVERRRAGLENFLLRVASHPRLCFDDQFINFLQEEHGWRETITDSGYLLQAENKIKSLSVSIRLKKPDPEVESFKNYGKQLETNLGNFLYTRSKIIEKNYALCKLHANYGKLFSEWSVIEKEMGDGLQKAGHYFDSIADSIDSVAEDEEQLADQLKEYLFYAGALQQLCSNHEALQRNLEQAQDTLNNRLAERTRAAAGKSGIMSRLFGTTDPDIVRDQTTRALDAKIQADNEAIEKAKLDLEEFTKKVMVEIDHFQKQKDKDLHESLVNFITLQVKAAKRNLQAWTQIKECLQNMP

Uniprot

H9IYR8   A0A2H1WMU9   A0A2A4JRU7   A0A212ET07   A0A0N0PEA9   A0A194QBK0   + More
A0A2J7RK00   V5G7V2   K7ITX5   A0A232F0I9   E2ADZ0   D6W9D7   A0A154PJI0   A0A088A3A8   A0A026W4X0   A0A2A3E7H9   A0A0T6B6D3   E2BCE6   A0A0C9QGZ7   A0A310SL48   A0A158NBE2   A0A1W4WCU7   A0A0N0BCJ6   A0A1Y1KL99   U4U7A6   N6T9R4   A0A1B6J6D7   A0A195BAD5   E9IRA8   F4X8U7   A0A195FCQ1   A0A151IL05   E0VR31   A0A2P8ZGZ8   A0A195DRN1   A0A0C9RHA9   A0A1B6KH74   A0A0V0G930   A0A069DTZ1   A0A023F0T5   A0A1U7R678   A0A1U7RDE9   A0A1S3IHE9   A0A0P5K093   A0A0P5FVX3   A0A3B4DSY9   A0A2I0MG79   W5ULJ2   A0A0A9W7E4   A0A091MBQ8   A0A1V4K5Z3   A0A091I5C9   B0S5M0   R0LM96   W5KF39   K7F6Y1   A0A099YX94   Q58EC1   A0A091VHJ0   A0A093PAK9   A0A087QNP4   A0A091M0W4   A0A091GY55   A0A091UL85   A0A094K8J8   A0A093JVH6   A0A0A9YCE9   A0A087VPU8   A0A091QG71   A0A091JD49   U3KGG0   H0Z0N2   A0A2T7PR86   A0A093IUE0   A0A093CA41   A0A093IMF1   A0A1A7XU72   A0A3Q2U656   A0A3B4GUN0   A0A3Q4HLC0   A0A3P8Q918   A0A3Q2G300   A0A1A7YFH9   A0A091QAI3   G1NHV5   E1BQF6   A0A0F7ZCN0   A0A091UHJ8   A0A091RKD6   A0A091RSY9   A0A091F098   A0A3Q2UUK5   A0A3B3T8K6   A0A0P7U4Q6   U3INH1   I3J8N9   G1T9G4   A0A093QN06   K1QVP1   A0A060W9R2  

Pubmed

19121390    22118469    26354079    20075255    28648823    20798317    + More
18362917    19820115    24508170    30249741    21347285    28004739    23537049    21282665    21719571    20566863    29403074    26334808    25474469    23371554    23127152    25401762    23594743    25329095    17381049    20360741    15592404    25186727    20838655    29240929    23749191    21993624    22992520    24755649   

EMBL

BABH01010921    BABH01010922    ODYU01009391    SOQ53784.1    NWSH01000697    PCG74731.1    + More
AGBW02012663    OWR44635.1    KQ459927    KPJ19312.1    KQ459220    KPJ02923.1    NEVH01002981    PNF41162.1    GALX01002266    JAB66200.1    NNAY01001414    OXU24053.1    GL438827    EFN68223.1    KQ971312    EEZ98174.1    KQ434938    KZC12041.1    KK107453    QOIP01000004    EZA50651.1    RLU23873.1    KZ288354    PBC27242.1    LJIG01009514    KRT82928.1    GL447257    EFN86682.1    GBYB01013903    JAG83670.1    KQ760133    OAD61787.1    ADTU01010992    ADTU01010993    KQ435900    KOX69092.1    GEZM01080406    GEZM01080405    GEZM01080404    GEZM01080403    GEZM01080402    GEZM01080401    JAV62169.1    KB631815    ERL86491.1    APGK01046266    KB741050    ENN74478.1    GECU01012967    JAS94739.1    KQ976540    KYM81187.1    GL765107    EFZ16914.1    GL888932    EGI57366.1    KQ981673    KYN38171.1    KQ977149    KYN05297.1    DS235442    EEB15837.1    PYGN01000060    PSN55740.1    KQ980581    KYN15462.1    GBYB01012592    JAG82359.1    GEBQ01029177    JAT10800.1    GECL01001574    JAP04550.1    GBGD01001727    JAC87162.1    GBBI01004096    JAC14616.1    GDIP01151000    GDIQ01191666    LRGB01000007    JAJ72402.1    JAK60059.1    KZS21960.1    GDIQ01256770    JAJ94954.1    AKCR02000014    PKK28699.1    JT418917    AHH42892.1    GBHO01039910    GBRD01006640    JAG03694.1    JAG59181.1    KK823593    KFP71587.1    LSYS01004331    OPJ79801.1    KL218243    KFP03382.1    BX255930    KB742929    EOB02815.1    AGCU01193299    AGCU01193300    AGCU01193301    KL887308    KGL74829.1    BC091982    BC164735    AAH91982.1    AAI64735.1    KK733996    KFR02235.1    KL225231    KFW69282.1    KL225768    KFM02848.1    KK514504    KFP64282.1    KL513910    KFO87360.1    KL409758    KFQ91699.1    KL339221    KFZ51841.1    KL206458    KFV82544.1    GBHO01014303    JAG29301.1    KL501232    KFO14640.1    KK696997    KFQ24952.1    KK501769    KFP17635.1    AGTO01000332    ABQF01011049    PZQS01000002    PVD35887.1    KL216593    KFV70296.1    KL460806    KFV12820.1    KK590766    KFV99933.1    HADW01020168    SBP21568.1    AADN05000350    HADX01006746    SBP28978.1    KK690812    KFQ16566.1    GBEX01002226    JAI12334.1    KK435974    KFQ90244.1    KK820088    KFQ39737.1    KK932664    KFQ45770.1    KK719330    KFO62656.1    JARO02008923    KPP62163.1    ADON01058539    ADON01058540    AERX01013232    AAGW02013744    AAGW02013745    AAGW02013746    AAGW02013747    AAGW02013748    AAGW02013749    AAGW02013750    KL425962    KFW90283.1    JH816117    EKC33010.1    FR904394    CDQ61999.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000053240    UP000053268    UP000235965    + More
UP000002358    UP000215335    UP000000311    UP000007266    UP000076502    UP000005203    UP000053097    UP000279307    UP000242457    UP000008237    UP000005205    UP000192223    UP000053105    UP000030742    UP000019118    UP000078540    UP000007755    UP000078541    UP000078542    UP000009046    UP000245037    UP000078492    UP000189705    UP000085678    UP000076858    UP000261440    UP000053872    UP000190648    UP000054308    UP000000437    UP000018467    UP000007267    UP000053641    UP000053605    UP000054081    UP000053286    UP000053283    UP000053584    UP000053119    UP000016665    UP000007754    UP000245119    UP000053875    UP000000539    UP000261460    UP000261580    UP000265100    UP000265020    UP000001645    UP000052976    UP000264840    UP000261540    UP000034805    UP000016666    UP000005207    UP000001811    UP000005408    UP000193380   

PRIDE

H9IYR8   

Pfam

PF00787   PX        + More
PF09325   Vps5
PF00379   Chitin_bind_4

Interpro

IPR001683   Phox        + More
IPR034783   SNX4       
IPR027267   AH/BAR_dom_sf       
IPR036871   PX_dom_sf       
IPR034902   PX_SNX4       
IPR037430   SNX4_BAR       
IPR015404   Vps5_C       
IPR031311   CHIT_BIND_RR_consensus       
IPR000618   Insect_cuticle       

SUPFAM

SSF64268   SSF64268        + More
SSF103657   SSF103657       

Gene 3D

1.20.1270.60     3.30.1520.10    

CDD

cd07622  BAR_SNX4
cd06864  PX_SNX4

ProteinModelPortal

H9IYR8   A0A2H1WMU9   A0A2A4JRU7   A0A212ET07   A0A0N0PEA9   A0A194QBK0   + More
A0A2J7RK00   V5G7V2   K7ITX5   A0A232F0I9   E2ADZ0   D6W9D7   A0A154PJI0   A0A088A3A8   A0A026W4X0   A0A2A3E7H9   A0A0T6B6D3   E2BCE6   A0A0C9QGZ7   A0A310SL48   A0A158NBE2   A0A1W4WCU7   A0A0N0BCJ6   A0A1Y1KL99   U4U7A6   N6T9R4   A0A1B6J6D7   A0A195BAD5   E9IRA8   F4X8U7   A0A195FCQ1   A0A151IL05   E0VR31   A0A2P8ZGZ8   A0A195DRN1   A0A0C9RHA9   A0A1B6KH74   A0A0V0G930   A0A069DTZ1   A0A023F0T5   A0A1U7R678   A0A1U7RDE9   A0A1S3IHE9   A0A0P5K093   A0A0P5FVX3   A0A3B4DSY9   A0A2I0MG79   W5ULJ2   A0A0A9W7E4   A0A091MBQ8   A0A1V4K5Z3   A0A091I5C9   B0S5M0   R0LM96   W5KF39   K7F6Y1   A0A099YX94   Q58EC1   A0A091VHJ0   A0A093PAK9   A0A087QNP4   A0A091M0W4   A0A091GY55   A0A091UL85   A0A094K8J8   A0A093JVH6   A0A0A9YCE9   A0A087VPU8   A0A091QG71   A0A091JD49   U3KGG0   H0Z0N2   A0A2T7PR86   A0A093IUE0   A0A093CA41   A0A093IMF1   A0A1A7XU72   A0A3Q2U656   A0A3B4GUN0   A0A3Q4HLC0   A0A3P8Q918   A0A3Q2G300   A0A1A7YFH9   A0A091QAI3   G1NHV5   E1BQF6   A0A0F7ZCN0   A0A091UHJ8   A0A091RKD6   A0A091RSY9   A0A091F098   A0A3Q2UUK5   A0A3B3T8K6   A0A0P7U4Q6   U3INH1   I3J8N9   G1T9G4   A0A093QN06   K1QVP1   A0A060W9R2  

PDB

5F0P     E-value=4.93613e-09,     Score=146

KEGG

101736454    K17919 sorting nexin-4 | (RefSeq) sorting nexin-4-like

PATHWAY

04144    Endocytosis - Bombyx mori (domestic silkworm)

GO

GO:0015031   GO:0035091   GO:0042302   GO:0005868   GO:1990459   GO:1903595   GO:0032456   GO:0005158   GO:0005154   GO:0031201   GO:0031901   GO:0005886   GO:1990460   GO:0006508   GO:0008270   GO:0051920   GO:0003887   GO:0005524   GO:0001664   GO:0005525   GO:0016491   GO:0003824  

PANTHER

PTHR46596  

Length:

419

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00029

Exp number, first 60 AAs:

0

Total prob of N-in:

0.01661

outside

1  -  419

 

 

Pi

269.3546

Theta

187.428233

Tajima's D

1.549125

CLR

0.345202

CSRT

0.79726013699315

Interpretation

Uncertain