Silkworm Genome Informatics Database

Gene

KWMTBOMO05286

Pre Gene Modal

BGIBMGA002403

Annotation

PREDICTED:_uncharacterized_protein_LOC106115725_[Papilio_xuthus]

Location

Bomo_Chr9(-):12793607-12795542 View in EpiBrowser

Location in the cell

Cytoplasmic Reliability : 1.04 Nuclear Reliability : 1.072

CDS

ATGAAGCATCAGCAAGTTAATGTGGATTATTGGGCAATGGGGAAAGCTATGCTGGTGTACGCAGCAATGACAGCGGTGGGCTGGCTTATTTTACGTACTTTTAATACGTTTTTCATGCTGCCTAGAAGAATGAGGACACAGCAGGAGAACATTCAAAAAACGTTGCAAGAGATGCAGAGGCGATTCCCGGATCTAAACATCACCGAAGAAGACTTGAAAAACGCAGAGAAAGAGTTAGACGAACTAATCAAAGAGGACGGACAGAAGAATAAGGCTGAAAGCGACTCGACAGAAGAAATGCCTGCAATCGAACAAACAAAGAAAACTATTTAA

Protein

MKHQQVNVDYWAMGKAMLVYAAMTAVGWLILRTFNTFFMLPRRMRTQQENIQKTLQEMQRRFPDLNITEEDLKNAEKELDELIKEDGQKNKAESDSTEEMPAIEQTKKTI

Similarity

Belongs to the peptidase C19 family.

Uniprot

H9IYR9 A0A0N1IJK3 A0A194QBT3 A0A0L7KWA6 A0A2A4JSZ3 A0A2H1WY40 + More
A0A212ET58 A0A1I8MNS1 B4KA90 A0A182XFH3 A7US55 A0A182I824 A0A0L0CGK7 A0A182PNK3 A0A0L7RHY6 A0A310SJV9 W8CBS9 A0A182FQ81 A0A3B0KRJ6 A0A0N0BIF0 A0A084VER5

Pubmed

19121390 26354079 26227816 22118469 25315136 17994087 + More
18057021 12364791 14747013 17210077 26108605 24495485 24438588

EMBL

BABH01010919 BABH01010920 KQ459927 KPJ19311.1 KQ459220 KPJ02922.1 + More
JTDY01004978 KOB67518.1 NWSH01000697 PCG74734.1 ODYU01011933 SOQ57968.1 AGBW02012663 OWR44634.1 CH933806 CH938325 EDW14577.1 KRG07920.1 AAAB01008817 EDO64451.2 APCN01002607 JRES01000409 KNC31543.1 KQ414588 KOC70434.1 KQ764553 OAD54486.1 GAMC01004566 JAC01990.1 OUUW01000013 SPP87871.1 KQ435729 KOX77611.1 ATLV01012288 KE524778 KFB36459.1

Proteomes

UP000005204 UP000053240 UP000053268 UP000037510 UP000218220 UP000007151 + More
UP000095301 UP000009192 UP000076407 UP000007062 UP000075840 UP000037069 UP000075885 UP000053825 UP000069272 UP000268350 UP000053105 UP000030765

PRIDE

H9IYR9

Pfam

PF00443 UCH

Interpro

IPR028889   USP_dom        + More
IPR001394   Peptidase_C19_UCH
IPR018200   USP_CS
IPR038765   Papain-like_cys_pep_sf

SUPFAM

SSF54001 SSF54001

ProteinModelPortal

H9IYR9 A0A0N1IJK3 A0A194QBT3 A0A0L7KWA6 A0A2A4JSZ3 A0A2H1WY40 + More
A0A212ET58 A0A1I8MNS1 B4KA90 A0A182XFH3 A7US55 A0A182I824 A0A0L0CGK7 A0A182PNK3 A0A0L7RHY6 A0A310SJV9 W8CBS9 A0A182FQ81 A0A3B0KRJ6 A0A0N0BIF0 A0A084VER5

KEGG

101736333 no KO assigned | (RefSeq) uncharacterized LOC101736333

GO

GO:0016021 GO:0006511 GO:0036459 GO:0016579

Length:

110

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

21.95489

Exp number, first 60 AAs:

21.95489

Total prob of N-in:

0.39329

POSSIBLE N-term signal

sequence

outside

1 - 9

TMhelix

10 - 32

inside

33 - 110

Pi

169.375576

Theta

118.247834

Tajima's D

1.564625

CLR

0.00007

CSRT

0.798010099495025

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics