SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05278  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA002502
Annotation
PREDICTED:_histone-lysine_N-methyltransferase_2D-like?_partial_[Bombyx_mori]
Full name
Histone-lysine N-methyltransferase      
Location in the cell
Nuclear   Reliability : 4.142
 

Sequence

CDS
ATGCTGCTGCTGCTGTGCGACGACTGCGACACCACGTGGCACACGTACTGCGCGCGCCCGCCGCTGGCCGACGTGCCGCGCGGCGCCTGGCGCTGCGAGCGCTGTCGCCGCTGTCTCACGTGCGGCACGCGCGACGCGCTCTCCTGGTGCACCGACAACTACACGGAATGTGCACCGTGCGCTTCCTTAGTGATGTGCTGTGTGTGTTCCGAACCTTATTCAGATGGAGAACTAATCATTCAGTGCGAAGCTTGTACTCGGTGGCTTCATGCATCCTGTGATTCAATTCGCAGTGAAAATGATGCCGAAATATGCTGTCGAGCTGGGTACAAGTGCGTGGGATGCCGCGGCGCGGAGACGGCGCCGCCGCACGTGGCGCGCGTGGCGTGCGTGCCCAGCGCCGCCCGCAGCGCGCCGCGCCCCACGCCGCAGTCGCTGGGCTTGGCGGGCGAGTACTACGTGGACGACGTGTGTCTGTCGCAGCGCGGCGCGCACCACATGAAGCAGCTGGAGGCCGACCTCGGCATCACGCATACCAGACGAAAGAGGCGTTTCAAAAATGAGAACCCCGACAAAGATGCCGTGGTTCAGAACGCTGACGTCGAGATGGCCGACGACTCCAAGCCTGACAGCACAGCCGAAGTCAAAGATGAACCAGGTCTTCCTCCTAACGCAAACTTTAAAGAAGGAACTCTGTGGAACATTTTAACCGACGGTCCCCCTCCTGAGGGGTTCACTGTATATACAACAGATTCAGGACTGACCGTACTCCGAAGGAAACGACAAAGAAACCTCAATAAATTAGGTATTGGAGGTTTCGTGGTTAGACAAAGACAGACTACAATCAAAGCTCAGGCAGATGAAGACAAAGATGGTGACGGCACACAGGCTTCTGGAGAATCCCCAAGCAACAAGCGCAAACCTCGTAGAAAGCCACGGTCAAAACTGATGGAACAATTTCCACCTTACATGCAAGAAGCTTTTTTTGGAAAGGAACTCCTCGATCCCCAAGTCAAATCTGCTGTTAGTTCCACTGGTAACCCTTCAGAGAGTCCAGCTGGTACTCTGAGACCAAATACCCCAGAAGGATACCGTGAACTGCGAGACTTTAAATTTGACTTTGAGAATTCTGACAGTGAAGGCGAAGATGTCCTGGCTGCTTTGACTTCTTTCAATGATCATGACAACACTGTTATCATCACCCTTAATAACGAAGAACTAGAGTTAATGCAATCACTAAAACCGAAACAAGAAAAAGAAGATCCATCCAACACTAATTCTGACGGTGTGAAAATAAAGACAGAGTCAGATGATGGTCAAGTGAAACAAACTGAGGATTCTACTGCCCTCAAGAATGCCTTGTTGGGCCCCCAGACCAACGAAGGAGAATCGACAGTGGGTGCGGCTGAAAGCGGATCCGCCACCCATAGCACGAAAACTGAGAACCTTAGCAGCGAGACAACATCATCTCAAGCGTCGACAATATCTCCGAAAGATGACCTGTCGCTGCTGGGCGTGAACTTGGACGCCATGGTGCGCGACACGCTTCCCGACATGGACAGCAACGATGTCGACGAGATATTCAAGGGCGTCCTTACTGATGACTCTCAGGAATCACAGGAATCATCAGTATCCTATGTGAATGCAATGACTCCATACTCTCAGAGACAGCAGCTGCAGAGTCCCATGGAGTACTCGTCACCCTACCATTCGGAGTTTGGGAACAGCAGTGGGGGCGCGCTGAGTCCGCTGGTGAGCGAGTCCACGTGGAGCGAGTCCGCGCCCGCCCCCGCGCCCTCCTACAACCAGCGCAGCGCCGACAAGATGCGCGCCGACGAGAGCTTAGGTTCTGCGGCTACGATATCCGCCGTGCTGTACGCGAACACAAACCACCCCGAATGGAAAACCGAGTTTCCCAACTGGGTCGATCGGTGCAAGCAGATCCTGAAGAAGTGGCGCGCCTTGCCCTCGGAGCACAAGGCGCCCTACTTGCAAAGGGCTAGGGACAACCGGAGCGCCATTCGCATGAAGAAAGCCCAGCAGGAACAGGAACGGGCTTGTGGACAGCAGCGTAGTGCTCGAGAGGCCGAGCAGGAGAGGGCGTGGAAGAACTTGCAGCAACAACGCCAGCAGCAGACCCAGCAGCAACAACAGATCATACACGATCAACGGATGCAAGGTACAGACTTGGCGACACTGCCTAAGGGATTTTGA
Protein
MLLLLCDDCDTTWHTYCARPPLADVPRGAWRCERCRRCLTCGTRDALSWCTDNYTECAPCASLVMCCVCSEPYSDGELIIQCEACTRWLHASCDSIRSENDAEICCRAGYKCVGCRGAETAPPHVARVACVPSAARSAPRPTPQSLGLAGEYYVDDVCLSQRGAHHMKQLEADLGITHTRRKRRFKNENPDKDAVVQNADVEMADDSKPDSTAEVKDEPGLPPNANFKEGTLWNILTDGPPPEGFTVYTTDSGLTVLRRKRQRNLNKLGIGGFVVRQRQTTIKAQADEDKDGDGTQASGESPSNKRKPRRKPRSKLMEQFPPYMQEAFFGKELLDPQVKSAVSSTGNPSESPAGTLRPNTPEGYRELRDFKFDFENSDSEGEDVLAALTSFNDHDNTVIITLNNEELELMQSLKPKQEKEDPSNTNSDGVKIKTESDDGQVKQTEDSTALKNALLGPQTNEGESTVGAAESGSATHSTKTENLSSETTSSQASTISPKDDLSLLGVNLDAMVRDTLPDMDSNDVDEIFKGVLTDDSQESQESSVSYVNAMTPYSQRQQLQSPMEYSSPYHSEFGNSSGGALSPLVSESTWSESAPAPAPSYNQRSADKMRADESLGSAATISAVLYANTNHPEWKTEFPNWVDRCKQILKKWRALPSEHKAPYLQRARDNRSAIRMKKAQQEQERACGQQRSAREAEQERAWKNLQQQRQQQTQQQQQIIHDQRMQGTDLATLPKGF

Summary

Catalytic Activity
L-lysyl-[histone] + S-adenosyl-L-methionine = H(+) + N(6)-methyl-L-lysyl-[histone] + S-adenosyl-L-homocysteine
EC Number
2.1.1.43
EMBL
BABH01010903    BABH01010904    BABH01010905    BABH01010906    BABH01010907    BABH01010908    + More
RSAL01000222    RVE44033.1    KQ459220    KPJ02917.1    NWSH01005542    PCG64137.1    KQ461135    KPJ08858.1    AGBW02010898    OWR47544.1    ADTU01026316    ADTU01026317    ADTU01026318    ADTU01026319    ADTU01026320    ADTU01026321    GEDC01017945    JAS19353.1    GL888284    EGI63299.1    GEZM01066211    GEZM01066209    GEZM01066202    GEZM01066200    GEZM01066199    GEZM01066198    GEZM01066193    JAV68063.1    GEZM01066212    GEZM01066197    GEZM01066195    GEZM01066192    GEZM01066191    JAV68084.1    GECZ01007317    JAS62452.1    GBBI01004228    JAC14484.1    GECZ01024206    JAS45563.1    KQ971312    EEZ98177.2    KYB29184.1    KQ976532    KYM81621.1    KQ976780    KYN08397.1    GBYB01009504    JAG79271.1    KQ979048    KYN23222.1    GGMS01010062    MBY79265.1    GEZM01066213    GEZM01066205    GEZM01066204    GEZM01066203    GEZM01066196    JAV68070.1    GEZM01066214    GEZM01066210    GEZM01066208    GEZM01066207    GEZM01066206    GEZM01066201    GEZM01066194    JAV68056.1    GGMS01004541    MBY73744.1    ABLF02022838    ABLF02022842    ABLF02022849    KQ981512    KYN40840.1    GDHC01012872    JAQ05757.1    GFXV01003024    MBW14829.1    KB632184    ERL89633.1    GDHC01002846    JAQ15783.1    APGK01048496    APGK01048497    KB741112    ENN73816.1    GAKP01002201    JAC56751.1    GDHF01019142    JAI33172.1    GDHF01018827    JAI33487.1    GAMC01002517    JAC04039.1    QOIP01000009    RLU18533.1    AFFK01020382    CCAG010018850    CH477339    EAT43161.1    JXUM01095568    KQ564203    KXJ72592.1    DS232111    EDS35112.1    UFQT01001259    SSX29729.1    SSX29731.1    SSX29730.1    SSX29732.1    MNPL01004750    OQR76504.1    SSX29733.1    KK107119    EZA58544.1    AJWK01014351    AJWK01014352    AXCM01003735    AAZX01001561    AJVK01005146    AJVK01005147    AJVK01005148    AJVK01005149    LJIJ01000202    ODN00515.1   
Pfam
PF00628   PHD        + More
PF05964   FYRN
PF05965   FYRC
PF00856   SET
PF00096   zf-C2H2
PF09011   HMG_box_2
PF06090   Ins_P5_2-kin
Interpro
IPR003888   FYrich_N        + More
IPR034732   EPHD       
IPR036910   HMG_box_dom_sf       
IPR001841   Znf_RING       
IPR011011   Znf_FYVE_PHD       
IPR019787   Znf_PHD-finger       
IPR001965   Znf_PHD       
IPR013083   Znf_RING/FYVE/PHD       
IPR001214   SET_dom       
IPR009071   HMG_box_dom       
IPR003889   FYrich_C       
IPR003616   Post-SET_dom       
IPR019786   Zinc_finger_PHD-type_CS       
IPR036236   Znf_C2H2_sf       
IPR013087   Znf_C2H2_type       
IPR000637   HMGI/Y_DNA-bd_CS       
IPR000679   Znf_GATA       
IPR037877   KMT2C       
IPR009286   Ins_P5_2-kin       
SUPFAM
SSF57903   SSF57903        + More
SSF47095   SSF47095       
SSF57667   SSF57667       
Gene 3D
PDB
2YUK     E-value=1.77541e-16,     Score=213

Ontologies

Topology

Subcellular location
Nucleus  
Length:
737
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00018
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00003
outside
1  -  737
 
 

Population Genetic Test Statistics

Pi
235.577466
Theta
195.242579
Tajima's D
0.378678
CLR
0.353943
CSRT
0.47747612619369
Interpretation
Uncertain
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