SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05277  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA002502
Annotation
PREDICTED:_histone-lysine_N-methyltransferase_2D-like?_partial_[Bombyx_mori]
Full name
Histone-lysine N-methyltransferase      
Location in the cell
Nuclear   Reliability : 3.288
 

Sequence

CDS
ATGGAAGTACCGGACGAAAATGTTCTAGAGGTAGATTTGTTAGCTGATGATGGATCAGAAGATGAAGGCGAAGCCCCGCCGTCTTCAGAATTTTACACCGGACCTGGGTCGACACCAACATCATGTGCGTCATCTCCTCGAGGTGAAGAACCAGCATCTCCCCATGCAGGTCTCACACAACCATCCTTCTTCCATCATCAAGGTTACACTCGCCCGTTTTTTACCTCGGCCAGGCGAGGTCCGGGTAGACCACGGAAAGAAGGACCCAAGTTAGCTCGTGAAGGCAAGATTGTTAGAAGATACAGAGGAAATCCAGGATCTTTAAGAGGGGCAAAAAGACATCGTGGTAGTAGGGATGATGCATCTGAAGACATGATGGACGAAGATGATTTTACAATACCACCTGTCCCCGAGGAACCTCCCTATATGCCCGAAAAATGGCCTGGTAAAGTTTGCTCACTTTGTAACTTGGGTGAACGCAGTCAACTAGGCCAGGGTGAAATGAGACAAATTCATTGCAATATTGGTGAAGCAGAGGGTAGTACGACACCTTTAGTTACCAATTCAGGAGGAGCCACACCAACAAGCATTGCTACTCCTACTAGTACTCCAACGACACCTGTCACACCAGGCTTAGTTTCTCCTCCACCAGAGCTAGTAGATCCCAACCAACATCCTCTTGGGCTACCGCTCAGCAGGCGCCAGAAATCTTTCAACAAGTGCAAAACACCACTCTACAATATGGAACACACAGATGAATTATCAATTATCGGTCACAATGACTCTCTAGAAATACAAGCAGTAGTGTCTTCTGGAGCATTGTACATTCACCGTTGTTGCCTTGAGTTCAGTCCACCATTCCAAGCAACATCATCTGAGGAAGACCTTGAGCAAGCAGAGGAGACGAGAATCAGAGGAATAGTCACTTCTGCTCTTACAAGAAAATGTGCCTTTTGTACTAGACATGGTGCAAGTATTCCTTGTAAGATGAGCTGTAACAAATACTACCATCTACCATGTCTTCTAGCATCAGGTGGTTTTATGGATTTTCAAAGCAAGGGCTCATTTTGTAAAGATCATTTATATCAAGTTCCCCTTGTCTGTACATCAGAAATCGACTGCAGGACTTGTAGGACTATCGGCGATATTGCGAATCTGATGACTTGCGTGGTTTGTGGAGCGCATTATCATGGAACTTGTGTCGGTCTTGCTCAGCTACCAGGCGTCCGGTCGGGCTGGGCGTGCCGCGGGTGCCGCGTGTGCCAGGTGTGCCGCGAGCCGGCGCCGGGCGAGGCGCGCGCCGTGTGCTGCGACCACTGCGACAAGCTCTACCACGCCGCCTGTCTACGACCTCTCATGGCCACCGTGCCCAAGTACGGCTGGAAGTGCAAGTGTTGCCGGGTGTGCTCCGACTGCGGGTCGCGGTCGCCGGGCGCCGGGCCGTCGTCCCGCTGGCACGCGCACTACACGGTGTGCGACTCGTGCTACCAGCAGCGCAACAAGGGCTCGTGCTGTCCGCTGTGTCGCCGAGCTTACCGCGCCGCCGCCTACCGCGACATGATACGGTGCACGCTCTGCAAGAGATACGTCCATGGCACCTGTGATCCAGATGCGGAGCCTCAACAGTATAGGAAAAACAAAGATCAGAATCCATCTTATGAATACAGCTGTCCTATATGCAAGAGTCAACTTGCACTGACCGGATCTAAACCTGGGTCTTTTGAAGAAGATAGCACTGCTTCAGTGTCTCAAGATTCTTCATATGGAGATGACAACTCTAATTTACAAGATCAGGACCCACTTGCGATTGAAACAAAGCCTGATGTTGGTCTTGGAAAAGGAAAACCTTTCTCAGTATCTTCAAAGGTAGCCAAAAAAAAAATTGGAGGCTACAAACTGAAAGGTGGATTCCCTGCGGGTGGCAAGTTGGGCTTCCAGAAACGCCAACGTTCTCTGTTGGACTTCGGTCGGAAAAGGGCATCTAAACCTAAAATGCGAGGAGTTTTTGGAGTACCAGGATTGGGGCTACAGAGACCCCAAGCTCCTGACAGTAAAAGCTCTGAGGATGATCCAGGAATGGAGAATAAACTAGTGCTGTGTTCAAGCAAAGACAAGTTTGTGCTCACACAAGATTTGTGCGTTATGTGTGGTGCTGTCGGTACGGACTCTGAGGGATGCCTTATTGCTTGTGCCCAGTGTGGACAGACTTATCATCCGTACTGCGTAAACATAAAGGTGATACAAAATTAA
Protein
MEVPDENVLEVDLLADDGSEDEGEAPPSSEFYTGPGSTPTSCASSPRGEEPASPHAGLTQPSFFHHQGYTRPFFTSARRGPGRPRKEGPKLAREGKIVRRYRGNPGSLRGAKRHRGSRDDASEDMMDEDDFTIPPVPEEPPYMPEKWPGKVCSLCNLGERSQLGQGEMRQIHCNIGEAEGSTTPLVTNSGGATPTSIATPTSTPTTPVTPGLVSPPPELVDPNQHPLGLPLSRRQKSFNKCKTPLYNMEHTDELSIIGHNDSLEIQAVVSSGALYIHRCCLEFSPPFQATSSEEDLEQAEETRIRGIVTSALTRKCAFCTRHGASIPCKMSCNKYYHLPCLLASGGFMDFQSKGSFCKDHLYQVPLVCTSEIDCRTCRTIGDIANLMTCVVCGAHYHGTCVGLAQLPGVRSGWACRGCRVCQVCREPAPGEARAVCCDHCDKLYHAACLRPLMATVPKYGWKCKCCRVCSDCGSRSPGAGPSSRWHAHYTVCDSCYQQRNKGSCCPLCRRAYRAAAYRDMIRCTLCKRYVHGTCDPDAEPQQYRKNKDQNPSYEYSCPICKSQLALTGSKPGSFEEDSTASVSQDSSYGDDNSNLQDQDPLAIETKPDVGLGKGKPFSVSSKVAKKKIGGYKLKGGFPAGGKLGFQKRQRSLLDFGRKRASKPKMRGVFGVPGLGLQRPQAPDSKSSEDDPGMENKLVLCSSKDKFVLTQDLCVMCGAVGTDSEGCLIACAQCGQTYHPYCVNIKVIQN

Summary

Catalytic Activity
L-lysyl-[histone] + S-adenosyl-L-methionine = H(+) + N(6)-methyl-L-lysyl-[histone] + S-adenosyl-L-homocysteine
EC Number
2.1.1.43
EMBL
BABH01010903    BABH01010904    BABH01010905    BABH01010906    BABH01010907    BABH01010908    + More
RSAL01000222    RVE44033.1    AGBW02010898    OWR47544.1    KQ459220    KPJ02917.1    ODYU01007184    SOQ49738.1    NWSH01005542    PCG64137.1    AJWK01014351    AJWK01014352    JXUM01095568    KQ564203    KXJ72592.1    AJVK01005146    AJVK01005147    AJVK01005148    AJVK01005149    CH477339    EAT43161.1    AXCP01008506    APCN01005430    ATLV01022651    KE525335    KFB47867.1    DS232111    EDS35112.1    CVRI01000040    CRK94795.1    AXCN02001722    UFQT01001259    SSX29733.1    SSX29731.1    SSX29729.1    SSX29730.1    SSX29732.1    KZ288474    PBC25301.1    GEZM01066211    GEZM01066209    GEZM01066202    GEZM01066200    GEZM01066199    GEZM01066198    GEZM01066193    JAV68063.1    GEZM01066212    GEZM01066197    GEZM01066195    GEZM01066192    GEZM01066191    JAV68084.1    GEZM01066214    GEZM01066210    GEZM01066208    GEZM01066207    GEZM01066206    GEZM01066201    GEZM01066194    JAV68056.1    GEZM01066213    GEZM01066205    GEZM01066204    GEZM01066203    GEZM01066196    JAV68070.1    GGFK01002516    MBW35837.1    GGFK01002521    MBW35842.1    KK107119    EZA58544.1    KQ971312    KYB29184.1    EEZ98177.2    AXCM01003735    AAZX01001561    GBYB01009504    JAG79271.1    DS235745    EEB16207.1    KB632184    ERL89633.1    KQ976780    KYN08397.1    KQ981512    KYN40840.1    GL888284    EGI63299.1    KQ976532    KYM81621.1    GECZ01024206    JAS45563.1    GECZ01007317    JAS62452.1    GEDC01017945    JAS19353.1    APGK01048496    APGK01048497    KB741112    ENN73816.1    GECU01001608    JAT06099.1    GFXV01003024    MBW14829.1    ABLF02022838    ABLF02022842    ABLF02022849    GGMS01004541    MBY73744.1    GGMS01010062    MBY79265.1    GBBI01004228    JAC14484.1    GL765280    EFZ16759.1    JRES01000737    KNC28853.1    CCAG010018850    KQ979048    KYN23222.1    CAQQ02111077    CAQQ02111078    CAQQ02111079    CH933808    EDW09814.2    GBXI01011892    JAD02400.1    CH916367    EDW01903.1    GDHF01022320    JAI29994.1    CP012524    ALC42621.1    GAMC01002517    JAC04039.1    GDHF01023765    JAI28549.1    GDHF01019142    JAI33172.1    GDHF01018827    JAI33487.1    CH940648    EDW61158.1    CH902619    EDV36256.1    AFFK01020382   
Pfam
PF00628   PHD        + More
PF05964   FYRN
PF05965   FYRC
PF00856   SET
PF09011   HMG_box_2
PF00096   zf-C2H2
PF06090   Ins_P5_2-kin
Interpro
IPR003888   FYrich_N        + More
IPR034732   EPHD       
IPR036910   HMG_box_dom_sf       
IPR001841   Znf_RING       
IPR011011   Znf_FYVE_PHD       
IPR019787   Znf_PHD-finger       
IPR001965   Znf_PHD       
IPR013083   Znf_RING/FYVE/PHD       
IPR001214   SET_dom       
IPR009071   HMG_box_dom       
IPR003889   FYrich_C       
IPR003616   Post-SET_dom       
IPR036236   Znf_C2H2_sf       
IPR013087   Znf_C2H2_type       
IPR000637   HMGI/Y_DNA-bd_CS       
IPR019786   Zinc_finger_PHD-type_CS       
IPR000679   Znf_GATA       
IPR037877   KMT2C       
IPR009286   Ins_P5_2-kin       
SUPFAM
SSF57903   SSF57903        + More
SSF47095   SSF47095       
SSF57667   SSF57667       
Gene 3D
PDB
2YSM     E-value=2.13652e-19,     Score=238

Ontologies

Topology

Subcellular location
Nucleus  
Length:
749
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00238
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00008
outside
1  -  749
 
 

Population Genetic Test Statistics

Pi
163.509393
Theta
158.905019
Tajima's D
-0.806418
CLR
159.611833
CSRT
0.176441177941103
Interpretation
Uncertain
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