Gene

KWMTBOMO05276  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA002406

Annotation

peroxiredoxin-4_precursor_[Bombyx_mori]

Location

Bomo_Chr9(-):12599327-12600663      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.612 PlasmaMembrane   Reliability : 1.295

CDS

ATGCTATTTATCATCATAACTGTGCTTTTAAGTGTAATGACTTGTTCGTCTTCACTTTTTGATGGTGATTCGTGTTACTCGTTTGGAAGTGGTAATGTTTTTCCGGGTGGAGCGCGAAAAATCGATCATAAATTACAATTTACAAAAGCTATGATTTCAAAACCGGCACCGGAGTGGGAGGCTACTGCTGTAGTTAATGGAGAGTTCACTCAACTTTCGTTATCAAGTTTCAAAGGAAAGTACCTTGTATTTTTCTTCTATCCTCTGGATTTTACATTCGTATGCCCTACGGAAATTTTGGCCTTCTCTGAAAGAATTGAAGAATTCAGGAAAATAAACACAGAAGTTGTAGCATGCTCTGTTGATTCACATTTCACTCATCTAGCTTGGATAAATACTCCACGTAAAGAGGGAGGCTTAGGAAAGATTAACATACCCCTACTAAGTGACTTAACACATTCTATTGCAAAAGACTACGGGGTTTATTTGGAGGATCTGGGCCATACTTTAAGAGGATTGTTTATAATTGATGACAAAGGAATTCTACGACAAATAACAATGAATGATTTGCCAGTAGGACGTTCAGTTGATGAAACATTGAGACTTGTTCAAGCATTCCAATACACTGATAATCATGGTGAAGTTTGCCCAGCAGGCTGGAAACCTGGTCAGGACACAATTATACCAAATCCTTCTGAGAAGAAGAAATATTTTGAAAAGGTTGCTAAAAATTAA

Protein

MLFIIITVLLSVMTCSSSLFDGDSCYSFGSGNVFPGGARKIDHKLQFTKAMISKPAPEWEATAVVNGEFTQLSLSSFKGKYLVFFFYPLDFTFVCPTEILAFSERIEEFRKINTEVVACSVDSHFTHLAWINTPRKEGGLGKINIPLLSDLTHSIAKDYGVYLEDLGHTLRGLFIIDDKGILRQITMNDLPVGRSVDETLRLVQAFQYTDNHGEVCPAGWKPGQDTIIPNPSEKKKYFEKVAKN

Uniprot

W8FW07   J7K7H6   I4DMT6   A0A194QHJ5   A0A0N1IDJ4   A0A2A4IVW9   + More
A0A2H1W9G5   A0A2S0RQP7   A0A3S2L288   S4NWV0   A0A0L7LEC8   H9IYS1   A8CWH8   A0A1B0CD55   A0A0F6Y627   A0A1Y1M4N3   A0A212F1C4   A0A0T6B0W4   A0A0P6K0V7   A0A1Q3FEB6   V5GT85   Q16G24   B0WW60   A0A182J486   A0A1I8MTY5   A0A0A9XE21   A0A1L8E9D4   A0A1L8E942   A0A2M4A918   A0A1L8DUF5   A0A2M4A988   A0A1L8E9F4   A0A2M3Z5R7   A0A182GGS8   A0A2M3Z5P2   A0A2M3Z602   A0A1L8E9H3   D6W9X8   A0A1I8NRG2   A0A1Y9H2L4   A0A1I8NRF8   A0A2C9GVV7   A0A1I8JSN5   A0A2M4BX81   A0A182JQX9   A0A182PH96   A0A182M9N4   A0A2M4BXG6   A0A182SWF3   A0A1B6C7F6   A0A0L0C478   A0A1L8DUE9   A0A1Y9IVQ5   A0A182RQU3   B4L925   A0A1L8E7X2   A0A023ENI6   A0A182X3K8   A0A182VDW2   A0A182I3G2   Q7PTG1   A0A182TWG2   A0A1B6EHL8   A0A0K8WCB5   A0A0K8UWU3   A0A1B6IQ64   A0A1B6JJ15   A0A2K8JM77   W5JKH8   A0A1A9W562   A0A224XIJ4   A0A140GAY2   R4G2X2   A0A1Q3F8B7   A0A0M3QWG0   A0A1Q3F7E1   R4WPW8   A0A023EMR8   A0A1Q3F8R0   K7J150   D3TMY2   A0A2M4A940   A0A1B0FAH1   A0A3Q1K618   A0A1B0AHY9   A0A182QDG6   A0A0V0G2X4   A0A3Q1CXB0   A0A2I4C7U2   B4LCC2   A0A1A9VYU6   A0A3P8UFV6   A0A1A9Y1H4   A0A1B0C6S6   A0A3Q1H6P2   A0A226CXG7   A0A3Q1K623   A0A3B3SN06   A0A3Q1JAN9   A0A3Q3BIK4  

Pubmed

22946963    22651552    26354079    23622113    26227816    19121390    + More
18194529    28004739    22118469    26999592    17510324    25315136    25401762    26823975    26483478    18362917    19820115    26108605    17994087    18057021    24945155    12364791    14747013    17210077    20920257    23761445    23691247    20075255    20353571    29240929   

EMBL

KF915805    AHK05704.1    JX311482    AFQ94049.1    AK402604    BAM19226.1    + More
KQ459220    KPJ02916.1    KQ461135    KPJ08856.1    NWSH01006734    PCG63280.1    ODYU01007184    SOQ49739.1    MF979108    AWA45971.1    RSAL01000222    RVE44032.1    GAIX01012407    JAA80153.1    JTDY01001497    KOB73724.1    BABH01010902    EU124629    ABV60347.1    AJWK01007429    KP191593    AKG26772.1    GEZM01044495    JAV78177.1    AGBW02010898    OWR47545.1    LJIG01016318    KRT80962.1    GDUN01000672    JAN95247.1    GFDL01009166    JAV25879.1    GALX01003604    JAB64862.1    CH478342    EAT33191.2    DS232139    EDS35892.1    GBHO01026566    GBRD01009444    GBRD01009443    GDHC01001323    JAG17038.1    JAG56380.1    JAQ17306.1    GFDG01003616    JAV15183.1    GFDG01003615    JAV15184.1    GGFK01003975    MBW37296.1    GFDF01004017    JAV10067.1    GGFK01004018    MBW37339.1    GFDG01003563    JAV15236.1    GGFM01003099    MBW23850.1    JXUM01011156    KQ560324    KXJ83038.1    GGFM01003017    MBW23768.1    GGFM01003174    MBW23925.1    GFDG01003564    JAV15235.1    KQ971312    EEZ99271.1    AXCN02000877    GGFJ01008554    MBW57695.1    AXCM01004497    GGFJ01008553    MBW57694.1    GEDC01028103    GEDC01013436    JAS09195.1    JAS23862.1    JRES01000932    KNC27163.1    GFDF01004016    JAV10068.1    CH933816    EDW17200.1    KRG07669.1    GFDG01003972    JAV14827.1    GAPW01003629    JAC09969.1    APCN01000208    AAAB01008807    EAA03983.5    GECZ01032385    GECZ01026109    JAS37384.1    JAS43660.1    GDHF01003533    JAI48781.1    GDHF01022152    GDHF01021165    JAI30162.1    JAI31149.1    GECU01018645    GECU01005186    JAS89061.1    JAT02521.1    GECU01008518    JAS99188.1    KY031023    ATU82774.1    ADMH02001258    ETN63385.1    GFTR01004120    JAW12306.1    KR816210    AMM72617.1    ACPB03017461    GAHY01002211    JAA75299.1    GFDL01011234    JAV23811.1    CP012525    ALC44083.1    GFDL01011561    JAV23484.1    AK417721    BAN20936.1    GAPW01002945    JAC10653.1    GFDL01011142    JAV23903.1    EZ422784    ADD19060.1    GGFK01003968    MBW37289.1    CCAG010006262    GECL01003647    JAP02477.1    CH940647    EDW68767.1    KRF84009.1    JXJN01026913    LNIX01000049    OXA38022.1   

Proteomes

UP000053268    UP000053240    UP000218220    UP000283053    UP000037510    UP000005204    + More
UP000092461    UP000007151    UP000008820    UP000002320    UP000075880    UP000095301    UP000069940    UP000249989    UP000007266    UP000095300    UP000075884    UP000075886    UP000069272    UP000075881    UP000075885    UP000075883    UP000075901    UP000037069    UP000075920    UP000075900    UP000009192    UP000076407    UP000075903    UP000075840    UP000007062    UP000075902    UP000000673    UP000091820    UP000015103    UP000092553    UP000002358    UP000092444    UP000265040    UP000092445    UP000257160    UP000192220    UP000008792    UP000078200    UP000265080    UP000092443    UP000092460    UP000257200    UP000198287    UP000261540    UP000264800   

PRIDE

W8FW07    J7K7H6    H9IYS1   

Pfam

PF00578   AhpC-TSA        + More
PF10417   1-cysPrx_C

Interpro

IPR000866   AhpC/TSA        + More
IPR024706   Peroxiredoxin_AhpC-typ       
IPR036249   Thioredoxin-like_sf       
IPR013766   Thioredoxin_domain       
IPR019479   Peroxiredoxin_C       

SUPFAM

SSF52833   SSF52833       

ProteinModelPortal

W8FW07   J7K7H6   I4DMT6   A0A194QHJ5   A0A0N1IDJ4   A0A2A4IVW9   + More
A0A2H1W9G5   A0A2S0RQP7   A0A3S2L288   S4NWV0   A0A0L7LEC8   H9IYS1   A8CWH8   A0A1B0CD55   A0A0F6Y627   A0A1Y1M4N3   A0A212F1C4   A0A0T6B0W4   A0A0P6K0V7   A0A1Q3FEB6   V5GT85   Q16G24   B0WW60   A0A182J486   A0A1I8MTY5   A0A0A9XE21   A0A1L8E9D4   A0A1L8E942   A0A2M4A918   A0A1L8DUF5   A0A2M4A988   A0A1L8E9F4   A0A2M3Z5R7   A0A182GGS8   A0A2M3Z5P2   A0A2M3Z602   A0A1L8E9H3   D6W9X8   A0A1I8NRG2   A0A1Y9H2L4   A0A1I8NRF8   A0A2C9GVV7   A0A1I8JSN5   A0A2M4BX81   A0A182JQX9   A0A182PH96   A0A182M9N4   A0A2M4BXG6   A0A182SWF3   A0A1B6C7F6   A0A0L0C478   A0A1L8DUE9   A0A1Y9IVQ5   A0A182RQU3   B4L925   A0A1L8E7X2   A0A023ENI6   A0A182X3K8   A0A182VDW2   A0A182I3G2   Q7PTG1   A0A182TWG2   A0A1B6EHL8   A0A0K8WCB5   A0A0K8UWU3   A0A1B6IQ64   A0A1B6JJ15   A0A2K8JM77   W5JKH8   A0A1A9W562   A0A224XIJ4   A0A140GAY2   R4G2X2   A0A1Q3F8B7   A0A0M3QWG0   A0A1Q3F7E1   R4WPW8   A0A023EMR8   A0A1Q3F8R0   K7J150   D3TMY2   A0A2M4A940   A0A1B0FAH1   A0A3Q1K618   A0A1B0AHY9   A0A182QDG6   A0A0V0G2X4   A0A3Q1CXB0   A0A2I4C7U2   B4LCC2   A0A1A9VYU6   A0A3P8UFV6   A0A1A9Y1H4   A0A1B0C6S6   A0A3Q1H6P2   A0A226CXG7   A0A3Q1K623   A0A3B3SN06   A0A3Q1JAN9   A0A3Q3BIK4  

PDB

3QPM     E-value=3.15526e-104,     Score=964

KEGG

101735759    K03386 peroxiredoxin (alkyl hydroperoxide reductase subunit C) [EC:1.11.1.15] | (RefSeq) peroxiredox

PATHWAY

04214    Apoptosis - fly - Bombyx mori (domestic silkworm)

GO

GO:0045454   GO:0004791   GO:0005623   GO:0051920   GO:0004601   GO:0016021   GO:0006979   GO:0005783   GO:0042744   GO:0008379   GO:0005829   GO:0016209   GO:0016491   GO:0003887   GO:0005524   GO:0001664   GO:0005525   GO:0003824   GO:0055114  

SignalP

Position:   1 - 17,         Likelihood:  0.991735

 

 

Length:

244

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

8.37529999999999

Exp number, first 60 AAs:

3.27379

Total prob of N-in:

0.18393

outside

1  -  244

 

 

Pi

205.755765

Theta

209.729336

Tajima's D

-0.355124

CLR

0.31744

CSRT

0.275836208189591

Interpretation

Uncertain