SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05273  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA002501
Annotation
PREDICTED:_putative_thiosulfate_sulfurtransferase?_mitochondrial_[Amyelois_transitella]
Full name
Sulfurtransferase      
Location in the cell
Mitochondrial   Reliability : 2.599 Nuclear   Reliability : 1.941
 

Sequence

CDS
ATGTTTCGCTGTGGACGTCGCATAACACAGTTAATAATACGAAAGTCTCGAACTACTTCCGCGGGCTATTTGAAGTTGAACTATGCACGAAAACAATTATCATCGAATGAATATAAAGCAATCCCACAGTTGAACGCTTTATCCCTGAGATTGTATTCAGAGTCGAAAGTCGAGACTAAGGTGGCGGATTATGATGAAGTAGTTAAAGCGATATCCAATAATAATATTCTACTGATAGACGTTAGAGAACCTGATGAAGTGAAAGATCATGGACATATACCAAATAGTATAAATATACCTTTAGGTACAATATCAACTGTACTTGGTGAAATGTCAGATAAAGAATTTAATAAAACCTACAAGAGACCAAAACCAAATCAAAATACTGAACTGATATTTTATTGTATGGCTGGGAGAAGATCTGCTAAGGCTCAAGAAAGTGCTATAAATCTTGGATTTAAAAATACAAAGAATTATCAAGGCAGCTGGACTGAATGGGCGAGTAAAGGAAAATGA
Protein
MFRCGRRITQLIIRKSRTTSAGYLKLNYARKQLSSNEYKAIPQLNALSLRLYSESKVETKVADYDEVVKAISNNNILLIDVREPDEVKDHGHIPNSINIPLGTISTVLGEMSDKEFNKTYKRPKPNQNTELIFYCMAGRRSAKAQESAINLGFKNTKNYQGSWTEWASKGK

Summary

Feature
chain  Sulfurtransferase
Pfam
PF00581   Rhodanese
Interpro
IPR036873   Rhodanese-like_dom_sf        + More
IPR001763   Rhodanese-like_dom       
IPR001307   Thiosulphate_STrfase_CS       
SUPFAM
SSF52821   SSF52821       
Gene 3D
PDB
3D1P     E-value=1.2723e-14,     Score=189

Ontologies

Topology

Length:
171
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00367
Exp number, first 60 AAs:
0
Total prob of N-in:
0.40287
outside
1  -  171
 
 

Population Genetic Test Statistics

Pi
57.782784
Theta
128.693413
Tajima's D
-1.089022
CLR
115.921693
CSRT
0.12244387780611
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
26822097 DDEGVYTCVAK 100.00 0.011
26280517 NYHEITVPSDIYYTNK 100.00 0.011
28467696 NYPSWVQVTR 100.00 0.011
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