SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05271  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA002412
Annotation
PREDICTED:_protein_piccolo-like_[Bombyx_mori]
Location
Bomo_Chr9(-):12459037-12491393      View in EpiBrowser
Location in the cell
Nuclear   Reliability : 3.998
 

Sequence

CDS
ATGGATGGGGCTTTCAATAATGTACTGGAAGGGACACGCCAGTACTTTATGGGAGTACCAAAGCAGGTGCAAGGTGAAGGATCTGGGCAACCGGTATGGCCTGCTAGTACGTCGCCACCTGAGGAAGGAACACCAGCTCAATCCGGCGCACCAGCCGCTACTTCTCGCCCACCTTCAACAGCCGCAGCTCCTCCAGCACCATCAGAAACTCCTCCCATGGCTGTACCAGCCCCACCCCGTCCGCCGTCTGAACCAATAGAACCCGAGCCGCATATTATACATAAAGCAACTGTGATGCGAGAAGCAGCAGAAAAGCGGCGAGAGATGCCTGACATAGAAGACGAAGAGGAACCAGGGGATACACTTTCCCCACCATCGCATATAATTCGCAAACCGCCACAGCCATTACCCTCACCTGCCCCTGCTCAAGCGGCACCGAGTCCGTCCCCCGTAAGACCACCATCCGTTGCCCCACCAGCGGCAGTCGTCCCGGAACCGCAGCCCGAATTGCTGCATCGTGCGGCTTTGCATTGTGTGCAAACTCCAACGTCAAGACCTGCAGAGCATTTTGCACAGAGTCGACCACCGGATCCTTATTCGTCTTCACGGCCGCCGGAATCATATCGGCACTATCCATATGAAACAAACGGTCCAGAAAATAACCGTAATTCTCACGTATCAATAGCATCACCACAGCCTGTACTTACCTCGCGCAACAGTCCTCAAACATACGCAAGGTTATCCAGTTCTGTACCCCAACATGCCGCCAGTCGTTTACGCGAAGCTTCCGTGCATAGCTCTCCTGCACAACGTTATGCTGTGTCAATGCCGCAACCACCGCCTCCGCATAATGACCGCGTTCCACCGATACACCATCCCCAAACACCACCTTTACAAAAGCTTACTTCAGGCGATGTCAGATCTGTACATCTTTACCCGCCTATCCAACATCGACGAGAATCTTCGCCTTATACGCGGCCATCTTCACAGTTTGATCGTCATCCAACTGTACCACCAAGAAAGTATGATCCTCAGCAAGCATATTCTGGTTATAGACAAGCAACGCCGCAACCTTTACAAAATCAACGAATAGATACACACCATCAGGTGCCGTATAAACACGCAATAGACCTTATGAATTCAAATTACTCATCTCGGCCATCTGAGCGGTCACCAGTACCAGTACCACAAGCACCACATTCCCATGACGCCACGCGTTTATCGTCGCGAATGGACTACCATAGCATAAGCAGACCAGTCGATTCTAGAAGTTCCTATCCATACGCAACATCAGGCACAACAGCATTGCGATATGCTCCCGGTGCTTCTTTGCCCGCTACAATAAATTCTACTCCTGCGTCAAGGTCCCCTTATCGTACTCCGGTCACCCATAAAACGAACTATGACTATGCAACATCGAACTCAGTCCAGAGTTCATCGGTCCGTTCTTCGACTAAAGCTGGTTACCCCAATCAACAAACTCGAATGACAGTTTCAGTAACGTCGATAGTAAATCAAATGAATCAAACCAAACAGAAGCAAGAATCACCAATCACAGGAGCATCACAAGTGAATCACCTTGATCAAACGAAACAGAAACGTGAGTCCCCTTTGGATTTATCAGTGAAGACGGTGAAAAATTCTGCAGACTCTTCAACAACACAGGACGACGCAGTAGATTCCGCATCAGTCGAAGGCAAAATATTACATGCACTGCAACCACGTCCTTCGAGTAGTCGTCAAGCACCTCCAGTAGGCTATACAGCTGCACATAAAGTAGATTTCGCTCCTAATTTTACAACTCAATACGGAGAAAGAAGCACAAATGTTTCTTACAATCCACCAACACCGCAGCTTCATAATTCTGTAAGATATAACGGCACCTATGATTCTCGAAGATTACCTGAAAGTTATCCAGTAGAATCTTCTCATGTCTACGCAGAGCGGAGTAAATATGGCGTGTCTGTAGCCAGAGCAGATTATGTGCCGAGAATAGATATTACTAGAGCGTCTGGTGATCCATGTCCGGTTGATAATAGAATTCGTGATGATCGAACCTTCATAATAGAAGAAAGAAAACGACCTCAGGGTCCCATAGTTAGCAACATTCCTGATAAAATTGTTCGTTATGAGACATGGAGTTCGGATAGTCGGATAGATCGCACTGGACAATCAGCCGTCAGAGAACAACATGAGTTAATGCGACAGCCTGTTTACAACTATAGCAGTCATAAACAATTTGAAGCCTATCAAAATGAACAAAAGCGTTCCAAATCATCGGCCGCGTACCGCGATCGCATTCATCATCCTAATCATGGATATCCTAGTGGTGGTCCTTACCCTGAAATACCTTCACGGGATCTAAGTCAGTATCATGCTTTGTACCAGGATAGAAATACATCAGTAAACGCCCGGCATCATGTTATACAAAGAATTCCGAGCCATAGAGAAGTTCATTCGCAACATGTAGATCCAAACAGAGTTCCAGCCGATAAAAGAGTATTAAGTATCCTTAGAAATAGTTTAGAAACTAAACAATCTGGTTTTTCTGATGCATCTCGTCCAACAAAGCAGATACCAGAACTGATAGTAATAGATGATGTAGATGATTCTGTAATAGATATAGATCTTACTAAAGACAATGATCATCCTGAAACCAAAAAACCAAATGTAACTAAATCATCTGAAGCTATTGCTCCAAACCCAGAAAATCATAATATACAAATGCCTAAAGCTGTTGATTCACTACCACGAGATTCTGAATATCATAAACTCGACAACACTGATTTAAAAAGAAAGACACCAGAAAATGATGTTGCCAGAATTAGAACAAAAGCAGAGTTAAAAGTAATGCCTCCATCGCAAGACAGTGGAATCAAATCAAATGTTAAACATGATTTAGTTACAGAAAGTGACGGAAATAAATTACTACCTAAATCACAGAAGCAACATTTATTTAATCAAATACGAAAAGATAATCTAAGATTTGAATCTGTCATACGCTCTGATAATACTTCTGAAGCACTTATTCCAGACGTTAAGTCTGAGCCCATGAATATTGAAGAAATAGAGAGAGATGCAGAAATTTCTATTAAAACAGAACATCTATTGGAAAATTTAAATCCCGAGCGCGGTAATTTGAATGAAGACAAACCTGCTGATGATTTAGATTGGGCTAGTGCCTGTGATAGTTTTGTAGAGCAACTGAAGTCAGGTTGCCACAAGAAAAAAAATACCAAAAAACTTGATGAAACAGATAACAATAATGAAAGCAAATTAGAGCCCGAAGAAACTTCGCTACCGCCCCCAGAAATTACAATTACCGAACCTGAAGTTGTTGTCAAACAGGAACCGATAGACGAAGATGAAATAAAACCTTTAGATGAACCGTCGAATATAAACGTAGAGGTCAAAATAGAAAATATAAAAGATAATGAAAGCACAGTGCAACATACTATCCTAAACAAAAATGAAAGGAACAATTCTAAATCTGAAAAAGGTAACAAAAATGCGACCAAACCAGAAAAATCAAAAAAGGACAAAAAAATTGATAAAGAGAAACCAGTGAAAACTAAATCAAAATCAAAGAGCAAATTAGAGAAAAATGAAAACAATTCTTCATCGCCGAATACAAAAAAAGATAAACTTAAAACCTTTATAAAAGAAGAATCTGAATCTACGGATGATGATGAGCCGCTCATAAAAAGTAAAATACTTAAAGATAAAGAACAAAGTGAACGTCTCAAACATCAACTTCTTAAAGACTTATCTGAAAAGTCTGCTTACGTCAAATTAGAATGCTGTGACGTAGACGTTAATAAAAACAACAGAAAATCGCTCGACTATGACTCCACTAAAGGAAAAGAAGAGAAACAAAACAAAGGTAAACTCTCGAAGACAAAAACAAAAGGGAAATCTCTTTTCGCCGACAATACCAAAAACGAAAAGCAGATTGTAGACTCGAGTACAGACAGCGACGATGAGAAACTAAGTGTCGCCAGTAGGCTTAGAATGCGTAAAAGTGTTAAGAACGAAGATAAAGTAATTCAATCTCAAAAAACTACGCCGTCGAAAAAAATTGATAGTACTAGCAGCGCTAGTAGTAGTTCTACGCCCATTCGCAAACCGGACTTCGGTGATGGATCCGCTTTCCACCCAGGTTGGGAAGAAGAGCTTTACCGATATAAACGTTCTCTTCGTATGCCTTCAAGACTTATTGCAATACCTAGAGGGCGTTCCGGAGGACCATTTGTTAGAAAAACAGGTGTATTGTTAACTAGAGGCTCCACATCGCTCCCAGATTTGGATCCCGCTCCATTGTCACCGGCACCTTCGTCAGCACCTTCAGCAGCAACTGATGATTTATACGCAAGACGTCCAGATAAAATGACCCTTGATAGTGATTTAGATTCTAATTCAAGTTGCTCTGCTCCAAACCGTTTACATTATGATTCAGAAGCTTCCACGTCTACGGTGTTTTCATCTTCAAAACCGACTAGAAAAAGCAGCTCCATCGTCGATGTATTAATACAAAAGTGTGGAAAAAAGGAAGATAACAAAAAGAAATCTAAAGAAAAAGACGATAAAACACCTAAAGTCATACAAAAAACTTCGAATACGACAGAGTTATTGCCTACTCCAAGCTTGGGACTTTTAAAAAATAGTAACAAGGGAACTTTAAGCGCTAAAAAAGAAAAATTAATGGAAGAAATATACTATCTAGGAGCGTTTCGAAAGGAGACTGTTTCTGCATTTAGGAATGCTTTTATAAAAAATACTGACGGACTAATTGGAGCTACAGAAGAATTTGCGCCCGTAGTTCTCAAATCACGGACAAGAACCGAAAGCAGAGTTCTGAAACAAAGAGCAACAATAAAGGAAGTTTTCGGCGACGAAAGACCAGCCTCTGCCCCGCCCACATCCTGTAGAGATGATATTGATTTACAAGAAGGGAAAGACGATATTGATGTAGCATCAAAACCAATTAAGGAACCAGATCCCAAAGCAAAACTCAAACCTAAAAAAATCATAAAAGATAAATTGAAGAGAAGATCTAGTTCAATAAGAGACGGCTTGCGGAGTACAAAATCTTTAAAAAGAAACGACGCTAAGGGTCGTCTTCTTCGTTTAAAGAAGCGTAATAATCTGATTAAGTGTTTAAATAATAAAAGAATCAAAGAAATTTCCAATACCAAACAAAAACCTGAAGGGACATCCACTTCGGAAGAAAAAGAAAAACCAAAAGAAGAAGGCAGTTCTTTGGGAGCTGATGCCACCAATACAAAAAGACGTTTCAAACGACTGTTCGGCAGAAGAAAATTTAGTTCCGGTTTCGATTATATACGAAAAAAAAAGAAAATTATACGGAGAGAGGATTCCAACAATAAAATAAGAAGACCAGCAGTTAAACCTAGTCCCGAGTCCATTCACGATATCCATAAAGAAATCAAAAGCTGGTTTATCAACAAAAGTATCGGAGAAACCCACCTCCACCGTGCCGCTAGACTGGGATACACTGATTGTGTCGCCTATTGCTTAGAAAAAATGGAATCAGATCCGTCTGCAAAAGATAACGCGGGATTCACACCTTTACATGTGGCAGCCGCTAAGGGTCACGTGCCAATTGCGAGACTCTTACTCCAATACGGGGCAAACGTATCTGCGGCTGCTCAAGGAGGCATAAGACCTCTGCACGAGGCCTGCGAGAACTGCCACGTCGAGGTGATACGTCTGCTTTTGGCGTACGGCGCTGACCCACTGCTGGGCACCTACGCCGGACAAACGCCCGAAGAGTTGACGGAGGGCCAGGCGACTAAGTTCTTACGACTTCACATCGCTGACGTGCAGGGCCAGGCCATCGAGCCGTGGAGGTTTCCACCACCCACGCACGTCATAGATTACGAAGAAATAGGTTGCGACCCGTTGTCCTCCCCGCCGCCCGCGTCGCCCGCGCCTCCTCCGGACGCGACCATAGAAATTCAATGCACAGAAGCGCCACTACCACCCTTCTATAGTCTCAAAAACGGGTCCGGTCAGCCGTCGGATGGTCTCTGGTGCCTGCTACAGGACATTACTAATTTATTACAGATAAAATCAAAAGACAGTCTACTGAAGCAAATCCATTGCGGATCTGGTTCCCCGAAGGAGTTGCTTCGTGAAATACGAACCCAGGAGTTCTTGGAGCGAGCGCAGTGTCACCAGCTCATCTGCGCCGGCGAGAAGGTCAACATCCGAGCCTCCAAAGTGGCTCTGATCAGAGTCACGGATAAACTGCGGCAACTCTTGAAAATAGAAACAGTGCTTGTTAGCTGA
Protein
MDGAFNNVLEGTRQYFMGVPKQVQGEGSGQPVWPASTSPPEEGTPAQSGAPAATSRPPSTAAAPPAPSETPPMAVPAPPRPPSEPIEPEPHIIHKATVMREAAEKRREMPDIEDEEEPGDTLSPPSHIIRKPPQPLPSPAPAQAAPSPSPVRPPSVAPPAAVVPEPQPELLHRAALHCVQTPTSRPAEHFAQSRPPDPYSSSRPPESYRHYPYETNGPENNRNSHVSIASPQPVLTSRNSPQTYARLSSSVPQHAASRLREASVHSSPAQRYAVSMPQPPPPHNDRVPPIHHPQTPPLQKLTSGDVRSVHLYPPIQHRRESSPYTRPSSQFDRHPTVPPRKYDPQQAYSGYRQATPQPLQNQRIDTHHQVPYKHAIDLMNSNYSSRPSERSPVPVPQAPHSHDATRLSSRMDYHSISRPVDSRSSYPYATSGTTALRYAPGASLPATINSTPASRSPYRTPVTHKTNYDYATSNSVQSSSVRSSTKAGYPNQQTRMTVSVTSIVNQMNQTKQKQESPITGASQVNHLDQTKQKRESPLDLSVKTVKNSADSSTTQDDAVDSASVEGKILHALQPRPSSSRQAPPVGYTAAHKVDFAPNFTTQYGERSTNVSYNPPTPQLHNSVRYNGTYDSRRLPESYPVESSHVYAERSKYGVSVARADYVPRIDITRASGDPCPVDNRIRDDRTFIIEERKRPQGPIVSNIPDKIVRYETWSSDSRIDRTGQSAVREQHELMRQPVYNYSSHKQFEAYQNEQKRSKSSAAYRDRIHHPNHGYPSGGPYPEIPSRDLSQYHALYQDRNTSVNARHHVIQRIPSHREVHSQHVDPNRVPADKRVLSILRNSLETKQSGFSDASRPTKQIPELIVIDDVDDSVIDIDLTKDNDHPETKKPNVTKSSEAIAPNPENHNIQMPKAVDSLPRDSEYHKLDNTDLKRKTPENDVARIRTKAELKVMPPSQDSGIKSNVKHDLVTESDGNKLLPKSQKQHLFNQIRKDNLRFESVIRSDNTSEALIPDVKSEPMNIEEIERDAEISIKTEHLLENLNPERGNLNEDKPADDLDWASACDSFVEQLKSGCHKKKNTKKLDETDNNNESKLEPEETSLPPPEITITEPEVVVKQEPIDEDEIKPLDEPSNINVEVKIENIKDNESTVQHTILNKNERNNSKSEKGNKNATKPEKSKKDKKIDKEKPVKTKSKSKSKLEKNENNSSSPNTKKDKLKTFIKEESESTDDDEPLIKSKILKDKEQSERLKHQLLKDLSEKSAYVKLECCDVDVNKNNRKSLDYDSTKGKEEKQNKGKLSKTKTKGKSLFADNTKNEKQIVDSSTDSDDEKLSVASRLRMRKSVKNEDKVIQSQKTTPSKKIDSTSSASSSSTPIRKPDFGDGSAFHPGWEEELYRYKRSLRMPSRLIAIPRGRSGGPFVRKTGVLLTRGSTSLPDLDPAPLSPAPSSAPSAATDDLYARRPDKMTLDSDLDSNSSCSAPNRLHYDSEASTSTVFSSSKPTRKSSSIVDVLIQKCGKKEDNKKKSKEKDDKTPKVIQKTSNTTELLPTPSLGLLKNSNKGTLSAKKEKLMEEIYYLGAFRKETVSAFRNAFIKNTDGLIGATEEFAPVVLKSRTRTESRVLKQRATIKEVFGDERPASAPPTSCRDDIDLQEGKDDIDVASKPIKEPDPKAKLKPKKIIKDKLKRRSSSIRDGLRSTKSLKRNDAKGRLLRLKKRNNLIKCLNNKRIKEISNTKQKPEGTSTSEEKEKPKEEGSSLGADATNTKRRFKRLFGRRKFSSGFDYIRKKKKIIRREDSNNKIRRPAVKPSPESIHDIHKEIKSWFINKSIGETHLHRAARLGYTDCVAYCLEKMESDPSAKDNAGFTPLHVAAAKGHVPIARLLLQYGANVSAAAQGGIRPLHEACENCHVEVIRLLLAYGADPLLGTYAGQTPEELTEGQATKFLRLHIADVQGQAIEPWRFPPPTHVIDYEEIGCDPLSSPPPASPAPPPDATIEIQCTEAPLPPFYSLKNGSGQPSDGLWCLLQDITNLLQIKSKDSLLKQIHCGSGSPKELLREIRTQEFLERAQCHQLICAGEKVNIRASKVALIRVTDKLRQLLKIETVLVS

Summary

Uniprot
H9IYS7  
Pubmed
19121390   
EMBL
BABH01010884   
Proteomes
UP000005204   
PRIDE
H9IYS7   
Pfam
PF12796   Ank_2
Interpro
IPR020683   Ankyrin_rpt-contain_dom        + More
IPR036770   Ankyrin_rpt-contain_sf       
IPR002110   Ankyrin_rpt       
SUPFAM
SSF48403   SSF48403       
Gene 3D
1.25.40.20    
CDD
cd00204  ANK
ProteinModelPortal
H9IYS7  
PDB
6MOL     E-value=1.08123e-17,     Score=227

Ontologies

KEGG
101735345    K23215 bcl-6 corepressor | (RefSeq) protein piccolo-like
GO
GO:0005515   GO:0004222   GO:0006508   GO:0003677   GO:0003887   GO:0005524   GO:0001664   GO:0005525   GO:0016491   GO:0003824  

Topology

Length:
2103
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00000
outside
1  -  2103
 
 

Population Genetic Test Statistics

Pi
244.638154
Theta
173.913906
Tajima's D
0.932176
CLR
0.188045
CSRT
0.644317784110794
Interpretation
Uncertain
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