SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05268
Pre Gene Modal
BGIBMGA002499
Annotation
PREDICTED:_uncharacterized_protein_LOC106720604_[Papilio_machaon]
Location
Bomo_Chr9(+):12393644-12439183      View in EpiBrowser
Location in the cell
Nuclear   Reliability : 4.543
 

Sequence

CDS
ATGCATAGTGTAATTTATAGAAAGTCTGACGTCCAGCACCCTCATGAAAACAACGAAGGCACGCCCTGCGCTTCGCATCTCCTTCACGTGAAACGAACACTCGGGAACAATGCTGAACTCTTCAATTTCACTGAACATCGAACATCGAAAGACGCAACTAGCAATGACACTACTGAGGATTTACGTAGCGAAATTCACAGGCGTAAGAAACGTTGGCTTCCTGAAGACGAAATGCAAGATGATCAGCCAAAGAAAAATCCCGAATTACCATTAGACTTAGACTTTCCTTACACCAGCAACGGCGACCCGTTCGATAGCAAGCTAAGCACGAGGAAACCGAAAACCAAAATTGACAAGAGCAACCTAATAACCAAGGTGCGACTCGATTCCGAAGAGTCGAGACCGAAACCAAAGACCCACGTCGAAGTGATCAAATCGAAGCCCGGCGTCGGGGTGATCAGCAAGGACATCGTTAAGAAGGAGCCGGTCGTGTACTCGGTGCTGACGGCGAACGCCAGCGACGACGGGCGACACGTTAACAAACGGGCCACCGTCGACCCGAAGAAAACCACGTGTCTGGTATACCTGCAGGCCGATCACATGTTCTATCAACGGTATGGCTCTGAGGAGGCCTGCATTGAGGTCATGACCAGACACGTGCAGAAAGTCAACGCAATATATAAAGTGACGGATTTCAATCTGGACGGAAAACCTGATAACATAACCTTCATGATCAAAAGGATAAAGGTCCACACTCTGGACGCTCTAAAAGACCCGGCTTATAGGTTCCCTAACAATTACGGCGTGGAAAAATACTTGGAGCTTTTTTCGGAGGAGGATTACGACGCATTCTGTTTGGCGTACATGTTTACGTATCGCGACTTCGAGATGGGCACGCTCGGCCTGGCTTGGACGGGCGATCTGAAGAATGCAGGCGGCGTCTGCGAAAAGAACGGGCACTATCGAGGCAGCATGAAGTCATTGAACACAGGCATCGTGACGTTACTGAACTACGGGAAGCACGTGCCTCCTGCCGTGTCGCACGTCACACTGGCGCATGAAATCGGACATAACTTTGGCTCGCCGCATGACCCAGAAATGTGCACACCATTCGGCGAAGACGGCAACTATATAATGTTCGCAAGGGCGACTAGCGGCGACAGAAAGAACAACAATAAGTTCTCCCCATGTTCGCTGAAGTCCATTGATCCAGTCTTAAATAACAAGGCCAGATCACCTAAGGGATGCTTTACAGAGCCGCAGCCCGCCATCTGCGGTAACGGCGTGGTGGAGGAGGGCGAGGAGTGCGACTGCGGCTGGGCCTCCGAGTGTACGGACGTATGCTGCCGCCCGCAAGCCGCGCGCCCTCTCTACAAACCCTGCACATTGACCGAGCACAGCGTTTGCAGTCCCAGTCAAGGTCCTTGTTGCACGGCTTCGTGCACGCTGAAGTTCGGCGACAAGTGTCGGTCGGACAACGGATGTCGCGACGCCGCGCACTGCGACGGCAAGCGTGCCGCGTGTCCCTCCAGCAGACACAAACCGAACAGGACGAGATGCGACAAAGAACTCGTCTGTTACATGGGAGAGTGCACCGGCTCAATATGCCTGGCATACGGTCTGGAATCGTGTCAGTGCTCCCCTCGAAGCGACGACCCTCGGTCCGCTTGCGAGCTGTGCTGCCGCAAGCCTGGCGGGCAGTGCCTGTCCTCCTTCCACTGGAACACCGCCCCGTACGACGTGCCCGACATGTACGCCAAGCCCGGCACGCCTTGCAATGACTACAATGGATACTGCGATGTATTCCAAAAGTGTCGTGAAGTGGACCCCTCTGGTCCGCTGGCGACTCTCCGAAAGCTGCTGTTGTCGGACGAGAGTATCGCCGGCTTCAAGCGGTGGATGCTGCGTCACTGGTACGCGGTGCTGCTCATCCTGCTGGCCGTCATCGCGTTACTGGTCGCGAGCACCCGTTTCTTCGGTCGTCACGGCAAGAAGCTGAAGTCGGTGACGATCATCCACTCGTCTACAACGGAAACCGTTCGACTGCCTGATGCTGCCGATCAAGGATTAATAGTTCATACTGCTATCAGGTCAAAAGTGCCATTAAAGAAGAAGGTAGCTCTCAGGACCAGAGCGTACCGCAACAAGAAGGATCTCAAAAACAAACAAGGCGACAAGGCACCGCTCTCAGACGGAGCCAAGAAGAGGAAGCCAACAAGTCAAGTCAAACACGAGGAACCGCAGAAAGTGATCAAGGAGACAACGGCGATCGTAACCAGCCCAGAGGGGAAGTCCCCCAAACACGTAATCCTGTCGAAACATAAAAACAAGGTTAAGAAACGGAAAATGAAACTGAAGAAGGAGACCATAGACTACAGCTCCATGCAGAAGCATTCCGCCTCGCCCACGAAAGACTCGGAGGCCCTGAGCAAAGTCCAGAAGTGGCTGTTGAGCTCGCCGCAGCCGACTGTCATACCAAAGTCCAAGTCCATCCCCCTGGGCCTCACGGAGCGGTCGCACAGGCCCACCTCGAAGGGTCCTCGGAAAACGAGACCGTCGAAGAGCGCCACCAACTTGTTGAGCGGAGAAAAGGCGAGACTCCAAGTCGTATTCAAACCGCCGTTCCGGTTCAGCGTTAAGATATGCAAGAGCGACAAGACCAAAGTGGTTCTAGACAAGTCGTCCAAACCCGACATCGAGAGGAAACGCCACGAGGCCGCCGCCCAACACCCCCCCGCGGATCCCAAACTCAACACATTCAGTAGAACGAAACCTCATAATGCCGCTCGACTTGAAAATACTCCTTCAAACGCTTCGACCGGAGAAAAGACACAGCACCAAGATAAAGGCAGTCACGGATACGAAAACTTGTTGCCCAGGAGCGCCAGTGATTGCAAACTCACCAAACAGATGTCCGACGTCAATCTCAGACACAAGAAGAGCAACTCGGTCGGCCAGAGGAAGGGGACCACCGAGAGCAAACAGAACCTCATCTGTCACGAAGACAACGACAGCGCGCACCTTTACGAGAACGTGACGTCACCGGAGACGCTCGCGCCGAAGAGCTGCAGCATGCCGCGGCGACAGCACGGCACCGCCATCGCGCGCCAGAGCAGCTACGGGCACCTGCCGCGCGCGCAGCCCCGCCCGCACCGCCGCAGCGCCACCAGCCTCGCCGCCGCCGAACCCGACCTCGACCACTTCTACAGCGTCATCGCGTCGCTGCGCCGGGACGGACGCGCACACACCAACACCGCCAGCTCCTCCGCCTCCAACAGGACCAACACAAACAGACCGGCCGGAAGGAGCTCACGACAGAACAGTTCAGTGGAAGCACCGACGCGATCCAATCCTGCTTCGCCCTCGAAGCTGAAGAGGCAAGCTAGCGAAGCGGAAATCACGAAGCAGCAATGTGACGGTGGCGTGAGAGGCTTCCAGCTAGTCGTGGGGAAGGAGAAGCTGAAACGGCAGATGAGTGATAACGAACTGTGCAAGTCTCGAGTGCAGCTAGCGATGCCAATGTCTGCGGGCGCCGAGCCGCGCCAGCCGTTCTGTTGGAACAAGCGCGCCAGTCTCGACTGCGAGGCCTCCCTGCCCGGCGCCGCGCGGCCCGCGGGCTCCAGGCTCGCTAACAAGCGCACCTACACGTTCGGCGAACTCAAGAACTCTGTCCCCAACGCGACCTCGCCCCCTCCTGATGACGTCCACATCTCCCCCGAAGACTTCTTGAAGATAATCGATAACTAG
Protein
MHSVIYRKSDVQHPHENNEGTPCASHLLHVKRTLGNNAELFNFTEHRTSKDATSNDTTEDLRSEIHRRKKRWLPEDEMQDDQPKKNPELPLDLDFPYTSNGDPFDSKLSTRKPKTKIDKSNLITKVRLDSEESRPKPKTHVEVIKSKPGVGVISKDIVKKEPVVYSVLTANASDDGRHVNKRATVDPKKTTCLVYLQADHMFYQRYGSEEACIEVMTRHVQKVNAIYKVTDFNLDGKPDNITFMIKRIKVHTLDALKDPAYRFPNNYGVEKYLELFSEEDYDAFCLAYMFTYRDFEMGTLGLAWTGDLKNAGGVCEKNGHYRGSMKSLNTGIVTLLNYGKHVPPAVSHVTLAHEIGHNFGSPHDPEMCTPFGEDGNYIMFARATSGDRKNNNKFSPCSLKSIDPVLNNKARSPKGCFTEPQPAICGNGVVEEGEECDCGWASECTDVCCRPQAARPLYKPCTLTEHSVCSPSQGPCCTASCTLKFGDKCRSDNGCRDAAHCDGKRAACPSSRHKPNRTRCDKELVCYMGECTGSICLAYGLESCQCSPRSDDPRSACELCCRKPGGQCLSSFHWNTAPYDVPDMYAKPGTPCNDYNGYCDVFQKCREVDPSGPLATLRKLLLSDESIAGFKRWMLRHWYAVLLILLAVIALLVASTRFFGRHGKKLKSVTIIHSSTTETVRLPDAADQGLIVHTAIRSKVPLKKKVALRTRAYRNKKDLKNKQGDKAPLSDGAKKRKPTSQVKHEEPQKVIKETTAIVTSPEGKSPKHVILSKHKNKVKKRKMKLKKETIDYSSMQKHSASPTKDSEALSKVQKWLLSSPQPTVIPKSKSIPLGLTERSHRPTSKGPRKTRPSKSATNLLSGEKARLQVVFKPPFRFSVKICKSDKTKVVLDKSSKPDIERKRHEAAAQHPPADPKLNTFSRTKPHNAARLENTPSNASTGEKTQHQDKGSHGYENLLPRSASDCKLTKQMSDVNLRHKKSNSVGQRKGTTESKQNLICHEDNDSAHLYENVTSPETLAPKSCSMPRRQHGTAIARQSSYGHLPRAQPRPHRRSATSLAAAEPDLDHFYSVIASLRRDGRAHTNTASSSASNRTNTNRPAGRSSRQNSSVEAPTRSNPASPSKLKRQASEAEITKQQCDGGVRGFQLVVGKEKLKRQMSDNELCKSRVQLAMPMSAGAEPRQPFCWNKRASLDCEASLPGAARPAGSRLANKRTYTFGELKNSVPNATSPPPDDVHISPEDFLKIIDN

Summary

Uniprot
H9IZ14   A0A2H1VS76   A0A194RMH0   A0A194QHI6   A0A212F1F9   A0A0L7LIR3   + More
A0A139WMP5   A0A1B6E110   A0A1W4WMP9  
Pubmed
19121390    26354079    22118469    26227816    18362917    19820115    + More
EMBL
BABH01010882    BABH01010883    ODYU01004126    SOQ43670.1    KQ459984    KPJ19023.1    + More
KQ459220    KPJ02906.1    AGBW02010898    OWR47554.1    JTDY01000914    KOB75458.1    KQ971312    KYB29308.1    GEDC01005693    JAS31605.1   
Proteomes
UP000005204    UP000053240    UP000053268    UP000007151    UP000037510    UP000007266    + More
UP000192223   
PRIDE
H9IZ14   
Pfam
PF00200   Disintegrin        + More
PF01562   Pep_M12B_propep
Interpro
IPR001590   Peptidase_M12B        + More
IPR001762   Disintegrin_dom       
IPR036436   Disintegrin_dom_sf       
IPR034025   ADAM10_ADAM17       
IPR024079   MetalloPept_cat_dom_sf       
IPR002870   Peptidase_M12B_N       
SUPFAM
SSF57552   SSF57552       
Gene 3D
3.40.390.10     4.10.70.10    
CDD
cd04270  ZnMc_TACE_like
ProteinModelPortal
H9IZ14   A0A2H1VS76   A0A194RMH0   A0A194QHI6   A0A212F1F9   A0A0L7LIR3   + More
A0A139WMP5   A0A1B6E110   A0A1W4WMP9  
PDB
6BE6     E-value=1.51491e-101,     Score=949

Ontologies

KEGG
101747087    K06704 disintegrin and metalloproteinase domain-containing protein 10 [EC:3.4.24.81] | (RefSeq) disi
GO
GO:0004222   GO:0016021   GO:0007229   GO:0008237   GO:0006508   GO:0003677   GO:0003887   GO:0005524   GO:0001664   GO:0005525   GO:0016491   GO:0003824  

Topology

Length:
1248
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
21.80147
Exp number, first 60 AAs:
0
Total prob of N-in:
0.64662
inside
1  -  637
TMhelix
638  -  660
outside
661  -  1248
 
 

Population Genetic Test Statistics

Pi
263.287375
Theta
180.937819
Tajima's D
1.214805
CLR
0.145437
CSRT
0.714514274286286
Interpretation
Uncertain
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