SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05261
Annotation
PREDICTED:_uncharacterized_protein_LOC106142900_[Amyelois_transitella]
Location in the cell
Cytoplasmic   Reliability : 2.028 Nuclear   Reliability : 1.73
 

Sequence

CDS
ATGGATAAAAACACAAACTTAATCAATCAGATTCATAAGTGCTTGTTACCAAAACTTTCTAAAGGAATAGATGAAACAGAAAATCCCATTGAATATGAAATTAGACTTAAAAATCTAAGAGACAATCTGGATAAACTAAATATTTTATTGAATGATATAGATCTCAGAGAATGTCCTGTTAGCTCTACAATATTGAGTAATATCATAATATTATATGAAGAAATAAAAAGTACTGGTAATTGGAATACTGAAGAATGCAAGGAGTACATAAAGCCTTTAGATAAATCTTTTGAAATTTTATATGGTTTCCCATTAGATCAAATCTTGTACATAAATATTTTTGATAAGAAAGATATTTTCAATGTATGCATTAAAATTCTACATGAAAAAATAACTGTAGACAGTCTAAAGAAGTATCCAAGCCTTGTAGAAGTTTATTCTTCATTAGTAGAAAAAGTAAAGGAATATGATGTTGATGTTAATCCGAGTACAGTATTACCATTATCTTTAATATTAATGGATGATTATTTAGAAAGTAATAAAGTGAAGGGATTACGGTGCTGTTCAGCAACATTGAGGTGTTTGACAACAGAACATTTTATGCAAGGAAATTATTATGAAGTAATATATTGTAGCCTTAAAAAGTTAACAGCCGAGAAGAATATTGAAATTACAAAACTCGTCTTTGAATGCCTCTTACAATTACTACAAGTTCTGCCTTCTGACGCACAGGTTTACCAAATGCATTATACAGATGCATGGTGTGAATTGTGTCAGTAG
Protein
MDKNTNLINQIHKCLLPKLSKGIDETENPIEYEIRLKNLRDNLDKLNILLNDIDLRECPVSSTILSNIIILYEEIKSTGNWNTEECKEYIKPLDKSFEILYGFPLDQILYINIFDKKDIFNVCIKILHEKITVDSLKKYPSLVEVYSSLVEKVKEYDVDVNPSTVLPLSLILMDDYLESNKVKGLRCCSATLRCLTTEHFMQGNYYEVIYCSLKKLTAEKNIEITKLVFECLLQLLQVLPSDAQVYQMHYTDAWCELCQ

Summary

Pfam
PF00067   p450        + More
PF10521   Tti2
Interpro
IPR018870   Tti2        + More
IPR016024   ARM-type_fold       
IPR002401   Cyt_P450_E_grp-I       
IPR017972   Cyt_P450_CS       
IPR001128   Cyt_P450       
IPR036396   Cyt_P450_sf       
IPR011989   ARM-like       
SUPFAM
SSF48371   SSF48371        + More
SSF48264   SSF48264       
Gene 3D

Ontologies

Topology

Length:
259
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.02755
Exp number, first 60 AAs:
0.0003
Total prob of N-in:
0.14845
outside
1  -  259
 
 

Population Genetic Test Statistics

Pi
239.863431
Theta
213.854577
Tajima's D
1.168981
CLR
0
CSRT
0.708464576771161
Interpretation
Uncertain
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