Gene

KWMTBOMO05257

Pre Gene Modal

BGIBMGA002417

Annotation

PREDICTED:_UPF0415_protein_C7orf25_homolog_[Amyelois_transitella]

Location

Bomo_Chr9(-):12165624-12171644      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.809

CDS

ATGTCGAAAATCAATCATGCTGAAGATTTAGTGGAAGTGGTTAAAGATAAAATCAAGTTTGGTGAAAATTTAATAATACAGCTACAACCAATTCAGCATGTTGAAGGTGTTATGAAATTGCAAAGGAAAATTAAGCAAGAAATAGAATTTTTGAAGAGGTTGGAAAAATCAAAAAACTTCAAGATTGAACAGTTGGCTTGTTCTAACCTGCGTCATCTTGGATCAATGGTGGAGTGCGCGCTTAGACCTTATGTGCTCGCTGTGTGTAAAACATTTCACATAGATAACTGTAATAAACTAATAATAGACATTGTTGGGGATCAAGGCAATACATGGACCAAAGTGATAGCAAGAAATCCAAAATCTTTATCTGCTTTAAGTGCAGGGAAATCTTCATATGGAGCAAGATCTATTTTAGATCAAGCTGATGACTACTTAAAGTGCTCTAGGCTATACCCATGCATGTACCAGCCACCAAAGGTTGTGTTTGAATTTATGAGTGGAATAGAAGAAAATTTAGCAAATAAATTAAGAGCAGTTGGTATTGTTGTGAAGGGTGAAATTTTACCAAATTCAATTGTTCAAGACAGTGGTGGTGAATCCTTTGATTCCCAAAGCAGTGATGATGAATCAAATTGCATTAATATGCAATCAAAGATACCTGAGCTTAATCATGGCATAGATCATTCTGAAATAAAAACTCTAAACTTGGATGTAACAACCATGATGGCATATGTGAGCAACATGACAAATGGCCATCACAATTTTATCTTTAAACAGGAAGTTTTGACACAGCAATGCTCTTGGGAAGCAGAGAGACCTGTAAAACCAATACTAAGAAAATTATTTGAAGGCAAGAAACTAGTCTGCTGTGAGACAGCATGGAATGACTTTGAAAAAATACTTGAAACATTAGGAGGACCAATGGAAAAGAAAAGAACTGTTCTTTTAAAAGAAATGATTACAGTTTATCCTGATGACTTTGGAGGTGAGGATGATTATCCGAGGCAAAATCTTAAAGTTCGAGGCCACGTTCGAGTAAGATCCAAGATTATATTCAATTTTGGTCATCGAATCAAAGCGCTTACAGTCTCGGCAAACGAAGGCTTCGTCAGGGCTGCTCTTCAACAGGGCGTAACATATGCAGCTTTTGTTCACGAGTCAAGAGCTCTCACTGAAGGGAAGGAAGACTCTGCAAGAAGGATAACTTTATGA

Protein

MSKINHAEDLVEVVKDKIKFGENLIIQLQPIQHVEGVMKLQRKIKQEIEFLKRLEKSKNFKIEQLACSNLRHLGSMVECALRPYVLAVCKTFHIDNCNKLIIDIVGDQGNTWTKVIARNPKSLSALSAGKSSYGARSILDQADDYLKCSRLYPCMYQPPKVVFEFMSGIEENLANKLRAVGIVVKGEILPNSIVQDSGGESFDSQSSDDESNCINMQSKIPELNHGIDHSEIKTLNLDVTTMMAYVSNMTNGHHNFIFKQEVLTQQCSWEAERPVKPILRKLFEGKKLVCCETAWNDFEKILETLGGPMEKKRTVLLKEMITVYPDDFGGEDDYPRQNLKVRGHVRVRSKIIFNFGHRIKALTVSANEGFVRAALQQGVTYAAFVHESRALTEGKEDSARRITL

Uniprot

H9IYT2   A0A194RNC5   A0A194QBU9   A0A2H1WJG2   A0A3S2P7W9   A0A212F1E5   + More
A0A1W4WUU1   A0A0T6B4R1   A0A1B6C4V1   A0A2J7QUU5   A0A067QNK2   A0A1Y1NM92   A0A1W4X4C8   K7JUF5   U4UGT1   A0A139WM07   A0A182TDK0   A0A182VE45   A0A182XIF0   A0A182KZF7   Q7PHB7   W5JF31   A0A182IRY6   Q16V90   A0A182HYS8   A0A182F911   A0A182QE23   A0A182W3J7   A0A182RE06   A0A182PHX3   A0A182Y8P0   A0A2M4AVL8   A0A182N9W1   A0A182M5A5   A0A182T7E4   A0A195DN12   A0A182JR89   A0A151WZ76   A0A034WFB3   F4W4J0   A0A195EZJ8   A0A0K8TMW2   A0A087ZSD2   A0A195BIM9   A0A158P342   A0A0A1XFK5   A0A2A3EPG4   A0A0C9S0M2   E9IIL4   A0A182GW52   A0A195CCT8   E2C3J9   W8BLX3   A0A182GKB5   A0A0K8WK66   A0A1Q3F0P0   T1JKY6   A0A1I8PVU7   A0A154P9R4   A0A026W6T4   B0W0V8   A0A232F6S8   A0A0L7RCC1   A0A1I8NGG6   A0A1B6JV62   B4J2Q9   E0VSR9   E2A1D0   B4LGJ0   A0A0L0C0M4   B3M8E8   B4N4B5   B4L0C4   A0A0M5J827   A0A0P4VPM6   R4G4C4   B3NJC1   A0A1B0A5B3   A0A1A9XLY4   A0A1A9X5N5   A0A1B0FML4   A0A0V0G9C7   B4HVK1   B4QLF6   Q9W0M6   Q8IGH5   B4PCN5   A0A3L8E2J8   A0A023F7Y4   A0A3B0K451   A0A087T062   A0A224XS79   A0A146M6L3   A0A1W4W0L5   A0A0A9XSZ0   Q2LZ81   A0A1A9UT16   A0A293MUQ7  

Pubmed

19121390    26354079    22118469    24845553    28004739    20075255    + More
23537049    18362917    19820115    20966253    12364791    14747013    17210077    20920257    23761445    17510324    25244985    25348373    21719571    26369729    21347285    25830018    21282665    26483478    20798317    24495485    24508170    28648823    25315136    17994087    20566863    26108605    27129103    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    30249741    25474469    26823975    25401762    15632085   

EMBL

BABH01010861    BABH01010862    KQ459984    KPJ19012.1    KQ459220    KPJ02894.1    + More
ODYU01009018    SOQ53106.1    RSAL01000222    RVE44015.1    AGBW02010898    OWR47565.1    LJIG01009900    KRT82155.1    GEDC01030266    GEDC01028884    JAS07032.1    JAS08414.1    NEVH01010480    PNF32358.1    KK853123    KDR11077.1    GEZM01002049    JAV97396.1    KB632314    ERL92237.1    KQ971317    KYB28972.1    AAAB01008898    EAA44604.4    ADMH02001667    ETN61495.1    CH477599    EAT38478.1    APCN01005404    AXCN02001202    GGFK01011499    MBW44820.1    AXCM01000198    KQ980713    KYN14295.1    KQ982649    KYQ53067.1    GAKP01005558    JAC53394.1    GL887532    EGI70885.1    KQ981905    KYN33551.1    GDAI01001919    JAI15684.1    KQ976467    KYM84145.1    ADTU01007725    GBXI01004103    JAD10189.1    KZ288204    PBC33152.1    GBYB01010084    GBYB01014126    JAG79851.1    JAG83893.1    GL763494    EFZ19562.1    JXUM01092549    JXUM01092550    JXUM01092551    JXUM01092552    JXUM01092553    KQ563994    KXJ72962.1    KQ977935    KYM98674.1    GL452320    EFN77537.1    GAMC01004466    GAMC01004465    JAC02091.1    JXUM01069668    JXUM01069669    KQ562563    KXJ75609.1    GDHF01026431    GDHF01001079    JAI25883.1    JAI51235.1    GFDL01013946    JAV21099.1    JH431430    KQ434853    KZC08635.1    KK107447    EZA50739.1    DS231819    EDS42775.1    NNAY01000829    OXU26292.1    KQ414615    KOC68642.1    GECU01024593    GECU01004616    JAS83113.1    JAT03091.1    CH916366    EDV96050.1    AAZO01005175    DS235756    EEB16425.1    GL435760    EFN72756.1    CH940647    EDW69428.1    JRES01001065    KNC25863.1    CH902618    EDV38883.1    CH964095    EDW78989.1    CH933809    EDW18070.2    CP012525    ALC43536.1    GDKW01001646    JAI54949.1    ACPB03008663    GAHY01001490    JAA76020.1    CH954178    EDV50083.1    CCAG010017555    GECL01001619    JAP04505.1    CH480817    EDW49966.1    CM000363    CM002912    EDX08729.1    KMY96723.1    AE014296    BT128838    AAF47417.2    AEM92669.1    BT001782    AAN71537.1    CM000159    EDW92758.1    QOIP01000001    RLU26960.1    GBBI01001383    JAC17329.1    OUUW01000012    SPP87482.1    KK112767    KFM58501.1    GFTR01005575    JAW10851.1    GDHC01003957    GDHC01002601    JAQ14672.1    JAQ16028.1    GBHO01019762    GBHO01019761    GBRD01014683    JAG23842.1    JAG23843.1    JAG51143.1    CH379069    EAL29627.3    GFWV01019794    MAA44522.1   

Proteomes

UP000005204    UP000053240    UP000053268    UP000283053    UP000007151    UP000192223    + More
UP000235965    UP000027135    UP000002358    UP000030742    UP000007266    UP000075902    UP000075903    UP000076407    UP000075882    UP000007062    UP000000673    UP000075880    UP000008820    UP000075840    UP000069272    UP000075886    UP000075920    UP000075900    UP000075885    UP000076408    UP000075884    UP000075883    UP000075901    UP000078492    UP000075881    UP000075809    UP000007755    UP000078541    UP000005203    UP000078540    UP000005205    UP000242457    UP000069940    UP000249989    UP000078542    UP000008237    UP000095300    UP000076502    UP000053097    UP000002320    UP000215335    UP000053825    UP000095301    UP000001070    UP000009046    UP000000311    UP000008792    UP000037069    UP000007801    UP000007798    UP000009192    UP000092553    UP000015103    UP000008711    UP000092445    UP000092443    UP000091820    UP000092444    UP000001292    UP000000304    UP000000803    UP000002282    UP000279307    UP000268350    UP000054359    UP000192221    UP000001819    UP000078200   

PRIDE

H9IYT2    Q9W0M6    Q8IGH5   

Pfam

PF07000   DUF1308        + More
PF18474   DUF5614
PF00271   Helicase_C
PF00476   DNA_pol_A
PF00270   DEAD
PF01246   Ribosomal_L24e
PF13881   Rad60-SLD_2

Interpro

IPR041076   DUF5614        + More
IPR010733   DUF1308       
IPR001650   Helicase_C       
IPR001098   DNA-dir_DNA_pol_A_palm_dom       
IPR036390   WH_DNA-bd_sf       
IPR014001   Helicase_ATP-bd       
IPR011545   DEAD/DEAH_box_helicase_dom       
IPR002298   DNA_polymerase_A       
IPR019760   DNA-dir_DNA_pol_A_CS       
IPR027417   P-loop_NTPase       
IPR011017   TRASH_dom       
IPR000988   Ribosomal_L24e-rel       
IPR038630   L24e/L24_sf       
IPR039540   UBL3-like_ubiquitin_dom       
IPR029071   Ubiquitin-like_domsf       

SUPFAM

SSF52540   SSF52540        + More
SSF46785   SSF46785       
SSF54236   SSF54236       

Gene 3D

2.30.170.20    

CDD

cd00079  HELICc
cd00472  Ribosomal_L24e_L24

ProteinModelPortal

H9IYT2   A0A194RNC5   A0A194QBU9   A0A2H1WJG2   A0A3S2P7W9   A0A212F1E5   + More
A0A1W4WUU1   A0A0T6B4R1   A0A1B6C4V1   A0A2J7QUU5   A0A067QNK2   A0A1Y1NM92   A0A1W4X4C8   K7JUF5   U4UGT1   A0A139WM07   A0A182TDK0   A0A182VE45   A0A182XIF0   A0A182KZF7   Q7PHB7   W5JF31   A0A182IRY6   Q16V90   A0A182HYS8   A0A182F911   A0A182QE23   A0A182W3J7   A0A182RE06   A0A182PHX3   A0A182Y8P0   A0A2M4AVL8   A0A182N9W1   A0A182M5A5   A0A182T7E4   A0A195DN12   A0A182JR89   A0A151WZ76   A0A034WFB3   F4W4J0   A0A195EZJ8   A0A0K8TMW2   A0A087ZSD2   A0A195BIM9   A0A158P342   A0A0A1XFK5   A0A2A3EPG4   A0A0C9S0M2   E9IIL4   A0A182GW52   A0A195CCT8   E2C3J9   W8BLX3   A0A182GKB5   A0A0K8WK66   A0A1Q3F0P0   T1JKY6   A0A1I8PVU7   A0A154P9R4   A0A026W6T4   B0W0V8   A0A232F6S8   A0A0L7RCC1   A0A1I8NGG6   A0A1B6JV62   B4J2Q9   E0VSR9   E2A1D0   B4LGJ0   A0A0L0C0M4   B3M8E8   B4N4B5   B4L0C4   A0A0M5J827   A0A0P4VPM6   R4G4C4   B3NJC1   A0A1B0A5B3   A0A1A9XLY4   A0A1A9X5N5   A0A1B0FML4   A0A0V0G9C7   B4HVK1   B4QLF6   Q9W0M6   Q8IGH5   B4PCN5   A0A3L8E2J8   A0A023F7Y4   A0A3B0K451   A0A087T062   A0A224XS79   A0A146M6L3   A0A1W4W0L5   A0A0A9XSZ0   Q2LZ81   A0A1A9UT16   A0A293MUQ7  

KEGG

101745922    no KO assigned | (RefSeq) UPF0415 protein C7orf25 homolog

GO

GO:0006261   GO:0005524   GO:0003887   GO:0003677   GO:0016021  

PANTHER

PTHR10133  

Length:

404

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00256

Exp number, first 60 AAs:

0.00018

Total prob of N-in:

0.01044

outside

1  -  404

 

 

Pi

261.279962

Theta

189.893672

Tajima's D

1.402625

CLR

0

CSRT

0.75721213939303

Interpretation

Uncertain