Gene

KWMTBOMO05251  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA002423

Annotation

CDGSH_iron-sulfur_domain-containing_protein_2-like_[Papilio_xuthus]

Location

Bomo_Chr9(-):12054498-12058304      View in EpiBrowser

Full name

CDGSH iron-sulfur domain-containing protein 2 homolog      

Location in the cell

Extracellular   Reliability : 2.045

CDS

ATGTACGTGGTTTCTAATTTAGTTAAAGTAACCATTCCCAACTATCTGTCGAGCTTGCCAATTCCAGATTCTGTTGGCGGATGGTTTCGTCTTGGAGTTAAAGATTGGTTAGCACTGATTCCGCCTACAGTTGTAGTTGGCGGTATATCTTACTACTCTTACCAGACAATAAAAAAAGCCAGAGAAGCTGGCAGTGGTCAAATAAACCCTTGTATCAGGAAGGACATTAATAAAGTTGTAGACTTTATTGACATTGAGGATATAACTGAGAAGGCATCCCTTTGCAGATGCTGGAGGAGTAAAAATTGGCCTTATTGTGATGGTAGTCACGGTCCTCATAATAAAGAAACTGGCGACAACACCGGCCCAGTCGTTGTCAGACACAAACCAGCCAACTAA

Protein

MYVVSNLVKVTIPNYLSSLPIPDSVGGWFRLGVKDWLALIPPTVVVGGISYYSYQTIKKAREAGSGQINPCIRKDINKVVDFIDIEDITEKASLCRCWRSKNWPYCDGSHGPHNKETGDNTGPVVVRHKPAN

Cofactor

[2Fe-2S] cluster

Similarity

Belongs to the CISD protein family. CISD2 subfamily.

Keywords

2Fe-2S   Complete proteome   Endoplasmic reticulum   Iron   Iron-sulfur   Membrane   Metal-binding   Transmembrane   Transmembrane helix   Reference proteome  

Feature

chain  CDGSH iron-sulfur domain-containing protein 2 homolog

Uniprot

A0A194QBP9   I4DPD5   A0A194RSG1   A0A0L7KXI0   A0A212ENA5   A0A3S2L9D3   + More
S4NNE9   A0A2H1VQV6   H9IYT8   A0A0K8TQR8   A0A2A3E0P2   A0A154PSV2   A0A087ZQZ7   K7J2B6   A0A182QMZ5   A0A310SUD8   T1DJ11   A0A1L8E0G0   T1E7L1   A0A1Y1NE57   A0A182NGE4   W5J7D8   A0A0L7QLR9   Q17DE6   A0A0M8ZX19   B4PQ50   A0A182SZ00   A0A2M4C374   A0A2M3Z4A3   A0A182FSS9   A0A2M4AI69   D6X4C2   B4K5X8   A0A182PP88   A0A0L7KY27   A0A0K8U1M7   A0A1L8E0D4   B4QZI8   B4HZ81   A0A034W594   A0A182W3E9   A0A1Q3EU88   A0A0T6AYK8   B3P5J1   A0A1B0GLK5   A0A195BBQ1   Q9VAM6   A0A1B0D5F7   A0A182UNC8   A0A182TPC5   A0A182XIJ9   A0A182KZL3   Q7QA13   A0A182Y8T5   B3M1H7   B4NFN4   W8CE34   A0A182HYM9   A0A1I8MQ27   A0A023EFR8   A0A336M924   A0A182MAE7   A0A182JXL2   J3JTG0   E2AML7   B4JYJ2   A0A0M3QY68   A0A232FBR6   A0A151WEU5   Q29BX8   B4GPI0   A0A026WR76   A0A182RZK9   A0A0J7KHJ3   A0A084WA14   E9IRP6   B4MBU8   A0A151IQF4   A0A1L8EEU2   A0A1W4UH07   A0A3B0JG59   A0A1J1J3N7   A0A1I8PG74   A0A195FLH7   U5EU56   A0A0M5JBG5   A0A1W4WPU7   A0A0L0BS34   R4WIT4   A0A1A9VVV1   A0A1A9WRV9   A0A1A9Z3Q9   E2BU24   A0A1B0FCD0   A0A2P8Y5D0   A0A1A9YLY9   A0A1B0BSM4   B4MY28   A0A2R7VRC2   A0A067RU36  

Pubmed

26354079    22651552    26227816    22118469    23622113    19121390    + More
26369729    20075255    24330624    28004739    20920257    23761445    17510324    17994087    18362917    19820115    25348373    10731132    12537572    12537569    20966253    12364791    14747013    17210077    25244985    24495485    25315136    24945155    26483478    22516182    23537049    20798317    28648823    15632085    24508170    30249741    24438588    21282665    26108605    23691247    29403074    24845553   

EMBL

KQ459220    KPJ02887.1    AK403541    BAM19775.1    KQ459984    KPJ19006.1    + More
JTDY01004604    KOB67962.1    AGBW02013684    OWR42968.1    RSAL01000404    RVE41904.1    GAIX01012284    JAA80276.1    ODYU01003882    SOQ43199.1    BABH01010850    GDAI01001353    JAI16250.1    KZ288474    PBC25297.1    KQ435180    KZC14996.1    AAZX01001561    AXCN02001612    KQ760176    OAD61642.1    GALA01000601    JAA94251.1    GFDF01001948    JAV12136.1    GAMD01002937    JAA98653.1    GEZM01008084    GEZM01008083    JAV94865.1    ADMH02002125    ETN58699.1    KQ414915    KOC59446.1    CH477296    EAT44391.1    KQ435812    KOX72860.1    CM000160    GGFJ01010611    MBW59752.1    GGFM01002601    MBW23352.1    GGFK01006987    MBW40308.1    KQ971410    EEZ97533.1    CH933806    KOB67961.1    GDHF01031898    GDHF01002095    JAI20416.1    JAI50219.1    GFDF01001950    JAV12134.1    CM000364    CH480819    GAKP01010004    JAC48948.1    GFDL01016183    JAV18862.1    LJIG01022510    KRT80198.1    CH954182    AJWK01035621    KQ976532    KYM81624.1    AE014297    AY071722    AY095084    AJVK01025197    AAAB01008898    EAA09117.3    CH902617    CH964251    GAMC01000891    JAC05665.1    APCN01005391    JXUM01153000    GAPW01005902    GAPW01005901    KQ571599    JAC07696.1    KXJ68149.1    UFQT01000739    SSX26834.1    AXCM01001884    APGK01026102    BT126516    KB740615    KB631815    AEE61480.1    ENN79983.1    ERL86450.1    GL440824    EFN65337.1    CH916377    CP012526    ALC47153.1    NNAY01000456    OXU28271.1    KQ983238    KYQ46373.1    CM000070    CH479186    KK107119    QOIP01000009    EZA58540.1    RLU18263.1    LBMM01007231    KMQ89923.1    ATLV01021997    KE525327    KFB47058.1    GL765280    EFZ16753.1    CH940656    KQ976780    KYN08392.1    GFDG01001581    JAV17218.1    OUUW01000005    SPP81327.1    CVRI01000069    CRL06991.1    KQ981512    KYN40844.1    GANO01001639    JAB58232.1    CP012525    ALC44606.1    JRES01001565    KNC22034.1    AK417380    BAN20595.1    GL450575    EFN80798.1    CCAG010016734    PYGN01000907    PSN39465.1    JXJN01019775    CH963880    EDW77017.2    KK854040    PTY10063.1    KK852417    KDR24325.1   

Proteomes

UP000053268    UP000053240    UP000037510    UP000007151    UP000283053    UP000005204    + More
UP000242457    UP000076502    UP000005203    UP000002358    UP000075886    UP000075884    UP000000673    UP000053825    UP000008820    UP000053105    UP000002282    UP000075901    UP000069272    UP000007266    UP000009192    UP000075885    UP000000304    UP000001292    UP000075920    UP000008711    UP000092461    UP000078540    UP000000803    UP000092462    UP000075903    UP000075902    UP000076407    UP000075882    UP000007062    UP000076408    UP000007801    UP000007798    UP000075840    UP000095301    UP000069940    UP000249989    UP000075883    UP000075881    UP000019118    UP000030742    UP000000311    UP000001070    UP000092553    UP000215335    UP000075809    UP000001819    UP000008744    UP000053097    UP000279307    UP000075900    UP000036403    UP000030765    UP000008792    UP000078542    UP000192221    UP000268350    UP000183832    UP000095300    UP000078541    UP000192223    UP000037069    UP000078200    UP000091820    UP000092445    UP000008237    UP000092444    UP000245037    UP000092443    UP000092460    UP000027135   

PRIDE

H9IYT8    A0A087ZQZ7    Q9VAM6    B3M1H7   

Pfam

PF09360   zf-CDGSH        + More
PF10660   MitoNEET_N

Interpro

IPR042216   FeS-contain_mitoNEET_C        + More
IPR018967   FeS-contain_CDGSH-typ       
IPR019610   FeS-contain_mitoNEET_N       

Gene 3D

3.40.5.90    

ProteinModelPortal

A0A194QBP9   I4DPD5   A0A194RSG1   A0A0L7KXI0   A0A212ENA5   A0A3S2L9D3   + More
S4NNE9   A0A2H1VQV6   H9IYT8   A0A0K8TQR8   A0A2A3E0P2   A0A154PSV2   A0A087ZQZ7   K7J2B6   A0A182QMZ5   A0A310SUD8   T1DJ11   A0A1L8E0G0   T1E7L1   A0A1Y1NE57   A0A182NGE4   W5J7D8   A0A0L7QLR9   Q17DE6   A0A0M8ZX19   B4PQ50   A0A182SZ00   A0A2M4C374   A0A2M3Z4A3   A0A182FSS9   A0A2M4AI69   D6X4C2   B4K5X8   A0A182PP88   A0A0L7KY27   A0A0K8U1M7   A0A1L8E0D4   B4QZI8   B4HZ81   A0A034W594   A0A182W3E9   A0A1Q3EU88   A0A0T6AYK8   B3P5J1   A0A1B0GLK5   A0A195BBQ1   Q9VAM6   A0A1B0D5F7   A0A182UNC8   A0A182TPC5   A0A182XIJ9   A0A182KZL3   Q7QA13   A0A182Y8T5   B3M1H7   B4NFN4   W8CE34   A0A182HYM9   A0A1I8MQ27   A0A023EFR8   A0A336M924   A0A182MAE7   A0A182JXL2   J3JTG0   E2AML7   B4JYJ2   A0A0M3QY68   A0A232FBR6   A0A151WEU5   Q29BX8   B4GPI0   A0A026WR76   A0A182RZK9   A0A0J7KHJ3   A0A084WA14   E9IRP6   B4MBU8   A0A151IQF4   A0A1L8EEU2   A0A1W4UH07   A0A3B0JG59   A0A1J1J3N7   A0A1I8PG74   A0A195FLH7   U5EU56   A0A0M5JBG5   A0A1W4WPU7   A0A0L0BS34   R4WIT4   A0A1A9VVV1   A0A1A9WRV9   A0A1A9Z3Q9   E2BU24   A0A1B0FCD0   A0A2P8Y5D0   A0A1A9YLY9   A0A1B0BSM4   B4MY28   A0A2R7VRC2   A0A067RU36  

PDB

4F2C     E-value=5.76114e-17,     Score=207

KEGG

101745150    no KO assigned | (RefSeq) CDGSH iron-sulfur domain-containing protein 2 homolog

GO

GO:0043231   GO:0051537   GO:0016021   GO:0005789   GO:0046872   GO:0016020   GO:0006281   GO:0006772   GO:0003677   GO:0001664   GO:0005525   GO:0016491   GO:0003824  

Subcellular location

Endoplasmic reticulum membrane  

Length:

132

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

15.8724

Exp number, first 60 AAs:

15.8724

Total prob of N-in:

0.07901

POSSIBLE N-term signal

sequence

outside

1  -  35

TMhelix

36  -  54

inside

55  -  132

 

 

Pi

245.061115

Theta

178.780232

Tajima's D

1.571195

CLR

0.05134

CSRT

0.800309984500775

Interpretation

Uncertain