SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05250
Pre Gene Modal
BGIBMGA002489
Annotation
PREDICTED:_uncharacterized_protein_LOC106720751_[Papilio_machaon]
Location in the cell
Nuclear   Reliability : 1.224
 

Sequence

CDS
ATGGGGCGCTACCGACTTTTATTTGTGATTGCAATAACAATTCTGGGTATCCAAAGCGGTCGCAGCGACTCTCTCTCTAATATGACCAATCGCGACGAAAGTTCCGCTCTAGCGAAAGAAGTTAAAGATAACAGCCGTTACAAAACACTTGAAGCAAATGCTATTATGTCGAAATTGCTTGTTGATGACAAAGACGGAGTTAGCAGGTCAGAAGTCTTTGATATGCTACATTCTCGTGATGATAGTCCTGATAACTTCGACTTGCCGACTTTCCCTGAAGACGTGGAAGACATGAAGAGCGAAGTTCCCGGTTTGCCTGATTCACAGGCTGAATTTTTACAGGTTGCTGACAGTGAGGTACGTAAAGATTCACAAAAGCTGCGAAGACCAGCGAAACGGGAAGAACCAGTTGGTCTCGCAGCTGGAATTATGGTTATTGTCACCTGTAGTATTGTATTCGTCGCCTATTCCGCATTAATTATCTGGAGAAGGATATATTTAAAAAGAAACGGTCTCAAGCATGAACTTTTAAGAAACGAAGAGGTTGTTGCTGAAACAAGACTAGAGTTGTGA
Protein
MGRYRLLFVIAITILGIQSGRSDSLSNMTNRDESSALAKEVKDNSRYKTLEANAIMSKLLVDDKDGVSRSEVFDMLHSRDDSPDNFDLPTFPEDVEDMKSEVPGLPDSQAEFLQVADSEVRKDSQKLRRPAKREEPVGLAAGIMVIVTCSIVFVAYSALIIWRRIYLKRNGLKHELLRNEEVVAETRLEL

Summary

Ontologies

Topology

SignalP
Position:   1 - 22,         Likelihood:  0.966644
 
 
Length:
190
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
24.68584
Exp number, first 60 AAs:
1.6915
Total prob of N-in:
0.16025
outside
1  -  137
TMhelix
138  -  160
inside
161  -  190
 
 

Population Genetic Test Statistics

Pi
274.904032
Theta
164.460807
Tajima's D
1.574935
CLR
0.406374
CSRT
0.804759762011899
Interpretation
Uncertain
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