Gene

KWMTBOMO05240  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA002485

Annotation

alpha_1?2-mannosidase_[Spodoptera_frugiperda]

Location

Bomo_Chr9(+):11822471-11824821      View in EpiBrowser

Full name

alpha-1,2-Mannosidase      

Location in the cell

Mitochondrial   Reliability : 1

CDS

ATGACGGGAATTTTACCTACGTATCAGCGGTTTGTTAACGGGGTACCCGTCCCGTCCATATCTCGGCGGTCGTTCCGTATAAGAGAGAAATATCTGATTGTTTCTGTACTTTTGACGTTCGGAATCGTGTGGTTAGGAGCTCTGTTTTATTTACCTGAATTTAAAAGTTCGAGCAGTGTGAATGACAGTGTTTACAATGTGTATAAACGTATTCAGAAAGCGGGTCCAGAGCTGTTAATGCCTCCGCCACTCGCTCAAAACGATGTGGGAGACTTTCCTGTAGTCGGTATCGTTCGGCATGGCGAAGAAGGTGACGACCCACACATAGTTGAGGACAGAAACAGACTTAAGGCTAAGATAGACGAAGACATGGGCATGAAAGTTCTCGAGAGACCGCAGTTTGATGTTGCACCTTCTGTATCTTCTTCTCGAGGTCCCAGCAAGCCTCCTGTTGACGCAATAGAGGAGCCCGCTGTTAGGAACTTCGCAGCTAAAGACGCATCTCCTGCTGGTCCTAAACCAGACGGGTCTAATAGATACGTCGCTGTTGCTATCGGTCCTAACGCTGATCCAGATCAGAAACAAAAGTTAGAGACAGTTAAAGAGTAA

Protein

MTGILPTYQRFVNGVPVPSISRRSFRIREKYLIVSVLLTFGIVWLGALFYLPEFKSSSSVNDSVYNVYKRIQKAGPELLMPPPLAQNDVGDFPVVGIVRHGEEGDDPHIVEDRNRLKAKIDEDMGMKVLERPQFDVAPSVSSSRGPSKPPVDAIEEPAVRNFAAKDASPAGPKPDGSNRYVAVAIGPNADPDQKQKLETVKE

Similarity

Belongs to the glycosyl hydrolase 47 family.

Uniprot

H9IZ00   A0A2H1WJZ0   O18498   A0A194QBT4   A0A194RSF6   A0A212FB20   + More
A0A0L7KZQ7   A0A2P8YN80   A0A1Y1L020   A0A1Y1KXH0   A0A1Y1KZY0   A0A1B6EL18   A0A0T6B092   A0A1B6MAL9   A0A1B6H5E4   A0A2J7QK79   A0A1B6D8W2   A0A0A9YCH2   A0A0P4W0H0   A0A069DWB1   A0A0A9X5C5   E2BAD4   A0A139WAB1   A0A139WAC4   V5H014   A0A2R7WBG6   A0A195BLC2   A0A087ZY30   A0A0L7R8Y0   A0A2A3EPS3   A0A026VVZ3   A0A3L8DBC9   A0A154PF35   A0A0C9Q8X5   A0A067R784   A0A232F7V8   A0A023GL76   A0A1E1X7K4   A0A131YJA8   L7M7E3   A0A131XF80   T1IIC1   A0A2R5LN53   A0A1W7RB10   A0A2M4BFT9   A0A1B0C9F4   A0A0P6A5S6   E9FX86   A0A0P4VWX6   A0A0P4W3H4   A0A0P6HHC7   A0A0P5PD52   A0A0P5ZD43   A0A0P5HGD1   A0A0P5C4G3   A0A0P5CEV0   A0A0P5HQP0   A0A0P5CH63   A0A0N8B595  

EC Number

3.2.1.-

Pubmed

19121390    9147053    26354079    22118469    26227816    29403074    + More
28004739    25401762    27129103    26334808    26823975    20798317    18362917    19820115    24508170    30249741    24845553    28648823    28503490    26830274    25576852    28049606    21292972   

EMBL

BABH01010823    ODYU01009163    SOQ53400.1    AF005035    AAB62720.1    KQ459220    + More
KPJ02879.1    KQ459984    KPJ19001.1    AGBW02009383    OWR50942.1    JTDY01003990    KOB68743.1    PYGN01000474    PSN45696.1    GEZM01071032    JAV66111.1    GEZM01071034    JAV66109.1    GEZM01071035    JAV66108.1    GECZ01031154    JAS38615.1    LJIG01016382    KRT80769.1    GEBQ01007073    JAT32904.1    GECU01037813    JAS69893.1    NEVH01013277    PNF28987.1    GEDC01015171    JAS22127.1    GBHO01012827    JAG30777.1    GDKW01000233    JAI56362.1    GBGD01000758    JAC88131.1    GBHO01031304    GBHO01012830    GBRD01008954    GDHC01013097    JAG12300.1    JAG30774.1    JAG56867.1    JAQ05532.1    GL446702    EFN87348.1    KQ971410    KYB24855.1    KYB24856.1    GALX01002318    JAB66148.1    KK854495    PTY16350.1    KQ976453    KYM85477.1    KQ414629    KOC67299.1    KZ288197    PBC33755.1    KK107746    EZA47932.1    QOIP01000010    RLU17413.1    KQ434878    KZC09918.1    GBYB01010728    JAG80495.1    KK852898    KDR14159.1    NNAY01000783    OXU26533.1    GBBM01000839    JAC34579.1    GFAC01003939    JAT95249.1    GEDV01010401    JAP78156.1    GACK01005064    JAA59970.1    GEFH01003569    JAP65012.1    JH430159    GGLE01006837    MBY10963.1    GFAH01000059    JAV48330.1    GGFJ01002779    MBW51920.1    AJWK01002278    GDIP01033896    JAM69819.1    GL732526    EFX88311.1    GDRN01090731    JAI60423.1    GDRN01090732    JAI60422.1    GDIQ01018849    JAN75888.1    GDIQ01134368    JAL17358.1    GDIP01045708    JAM58007.1    GDIQ01230085    JAK21640.1    GDIP01191383    JAJ32019.1    GDIP01171595    JAJ51807.1    GDIQ01230086    JAK21639.1    GDIP01171596    JAJ51806.1    GDIQ01211499    JAK40226.1   

Proteomes

UP000005204    UP000053268    UP000053240    UP000007151    UP000037510    UP000245037    + More
UP000235965    UP000008237    UP000007266    UP000078540    UP000005203    UP000053825    UP000242457    UP000053097    UP000279307    UP000076502    UP000027135    UP000215335    UP000092461    UP000000305   

PRIDE

H9IZ00   

Pfam

PF01532   Glyco_hydro_47

Interpro

IPR001382   Glyco_hydro_47        + More
IPR036026   Seven-hairpin_glycosidases       
IPR012341   6hp_glycosidase-like_sf       

SUPFAM

SSF48225   SSF48225       

Gene 3D

1.50.10.10    

ProteinModelPortal

H9IZ00   A0A2H1WJZ0   O18498   A0A194QBT4   A0A194RSF6   A0A212FB20   + More
A0A0L7KZQ7   A0A2P8YN80   A0A1Y1L020   A0A1Y1KXH0   A0A1Y1KZY0   A0A1B6EL18   A0A0T6B092   A0A1B6MAL9   A0A1B6H5E4   A0A2J7QK79   A0A1B6D8W2   A0A0A9YCH2   A0A0P4W0H0   A0A069DWB1   A0A0A9X5C5   E2BAD4   A0A139WAB1   A0A139WAC4   V5H014   A0A2R7WBG6   A0A195BLC2   A0A087ZY30   A0A0L7R8Y0   A0A2A3EPS3   A0A026VVZ3   A0A3L8DBC9   A0A154PF35   A0A0C9Q8X5   A0A067R784   A0A232F7V8   A0A023GL76   A0A1E1X7K4   A0A131YJA8   L7M7E3   A0A131XF80   T1IIC1   A0A2R5LN53   A0A1W7RB10   A0A2M4BFT9   A0A1B0C9F4   A0A0P6A5S6   E9FX86   A0A0P4VWX6   A0A0P4W3H4   A0A0P6HHC7   A0A0P5PD52   A0A0P5ZD43   A0A0P5HGD1   A0A0P5C4G3   A0A0P5CEV0   A0A0P5HQP0   A0A0P5CH63   A0A0N8B595  

KEGG

101744335    K01230 mannosyl-oligosaccharide alpha-1,2-mannosidase [EC:3.2.1.113] | (RefSeq) mannosyl-oligosaccha

PATHWAY

00510    N-Glycan biosynthesis - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)
04141    Protein processing in endoplasmic reticulum - Bombyx mori (domestic silkworm)

GO

GO:0016021   GO:0004571   GO:0005509   GO:0008152   GO:0005783   GO:0000139   GO:0006491  

Length:

202

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

20.49228

Exp number, first 60 AAs:

20.49209

Total prob of N-in:

0.99365

POSSIBLE N-term signal

sequence

inside

1  -  30

TMhelix

31  -  50

outside

51  -  202

 

 

Pi

66.224557

Theta

90.807956

Tajima's D

-0.869354

CLR

704.871308

CSRT

0.16119194040298

Interpretation

Uncertain