SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05232  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA002481
Annotation
PREDICTED:_cell_division_cycle_5-like_protein_[Bombyx_mori]
Transcription factor
Location in the cell
Nuclear   Reliability : 2.923
 

Sequence

CDS
ATGCCCCGGATTATGATAAAAGGTGGCGTTTGGCGCAACACCGAGGATGAAATCCTTAAAGCGGCTGTAATGAAATATGGGAAAAATCAGTGGTCTCGTATAGCTTCGTTGCTCCATCGTAAATCTGCAAAACAATGTAAAGCCCGTTGGTACGAGTGGTTAGATCCAAGTATAAAGAAAACAGAATGGTCCCGAGAAGAGGACGAAAAGTTGTTGCACTTGGCCAAATTGATGCCAACTCAGTGGAGGACCATTGCTCCTATCATCGGACGTACTGCTGCACAATGTTTGGAAAGATACGAATATTTGTTAGACCAAGCCCAAAAGAAAGAGGAAGGTGAGGATATGGGTGATGATCCACGTAAGCTGAAGCCTGGTGAGATTGATCCTAATCCAGAAACAAAACCTGCTAGACCTGATCCAAAAGATATGGATGAAGATGAATTGGAGATGCTCTCAGAAGCTCGTGCACGTTTAGCTAACACTCAGGGTAAGAAAGCTAAAAGGAAGGCTCGTGAAAAGCAATTAGAAGAGGCCCGTCGTCTTGCTGCACTACAGAAGCGAAGGGAACTCAGTGCTGCTGGGATAGCTGTACCATTAAGGCGTAAAAAAAAACGTGGCGTTGATTATAATGCTGAGATACCATTTGAAAAGAGACCAGCGTCTGGTTTCTATGACACTTCGACTGAAGTAGTTGATCCCATGGCTCCTGATTTCTCAAGACTCCGACAACAACACCTTGACGGTGAACTACATTCTGAGAAAGAGGAGAGAGAACGTCGCAAGGATAAGCAAAAATTGAAACAACGCAAGGAAAATGATGTGCCACAAGCCATGCTACAAGGTGATGCTCCGGCAAGAAAACGCAGCAAACTTGTGCTGCCAGAGCCACAAGTTACTGATCAAGAGCTGCAGCAGGTGGTAAAGTTGGGGCGTGCTTCGGAGGCGGCTCGCGAAGCCGCGTCGGGCGGTGCGGCGGCCGCTACCGACGCTTTGGTCGCGCAGTACGCGCTCACACCTGCGCCCGCCACTGCTCTGCGCACGCCCGCACAACATGACAGAATTCTAATGGAAGCACAGAATGTAATGGCACTAACTCATGTGGACACCCCATTGAAAGGAGGCTTGAACACTCCATTACATGAGAGTGATTTTTCTGGGGCACTACCTCAAAATCAAGTTGTGGCCACACCTAACACTGTTCTGGCTACACCATTCAGATCATCTCGCAGTGAAGTGTCCACACCTGGCAGTTTTAACACTCCAGGACATGGCAATAGTCAGCTTGGGCTGACCCCAGGCTTGCGAGATAAACTTAACATCAACCCTGAAGACAGAGTGAATGGTGGTGACACTCCTCAAATTTCCCATCAACTTCAAAAACAAGCAAAAACATCAGTCAGAAACGCTTTGCAATCTCTGCCTGTTCCGAGAAATGACTACGAAATCGTGGTGCCAGAGCAAGAGGCTGGTGAAGATAAGGACGATTCGGCCGCAGTCGTTTCCGTGGAGGACCAAGCTGATGCTGATGCTAGATATGCTAAGGAACAAGAAGAAAAACGCGCGGCCGAGTTGTCGCGTCGCTCGCTGGCGGTGCAGCGCGGCGCGGCGCGTCCCGCCGACGTCAACGTGTCGGTGCTGCGCGGTGCCGCCTCGCTGTCCGCCCTCACGCCGCTGCAGCACGCCGAGGAACTGCTCAAAGCCGAGATGGTCACCATGCTGCACTACGATGCCCTCAGGGACCCGCCTGAAGGTGTAGATAAAAAGCGTGCTATTCAACTACAAGCATCCCATTTAGCATACTTAGAACAGCATCCATATGAAGAGTTTGCTGACGAAGAATTAGCTGCCGCTAAAGAAGCACTGAAGAAAGAAATGGAAGTCGTGAAAGCGGGCATGAGTCATGGGGACCTTAGTATAGACGCGTACACTCAAGTCTGGGAGGAATGTTTAGCACAGGTACTTTTTCTACCCGGTCAACATCGTTACACGCGTGCTAATTTGGCAAGCAAGAAGGATCGTTTAGAATCTGCAGAGAAAAGATTAGAGCAGAATAGAAATCACATGGCGAAGGAAGCAAAAAAATGTTCAAAAATGGAAAAGAAACTTCGTGTGCTAACAGGAGGTTACCAGAGTCGTGCCGCAGCTCTAATAAAACAGTTTCAAGAATTACAAGATCAAATAGAACAAGCTAATTTAGAATTATCGACCTTTAAATTCTTGGCTGAACAGGAGAAAGCGGCCATTCCACGTAGAATAGAATCGTTGACCGAAGACGTCAGCCGACAGACTGAACGCGAGAAGCTTTTACAAAAGCGATACTCGGAACTACAGGCCGAGGTAGAAAACATGCAGAAAGGGAAGAAAAGTCAAGTTTCCGAAAATGTTAATTCTCAAAAAACGACTGCATAA
Protein
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAPIIGRTAAQCLERYEYLLDQAQKKEEGEDMGDDPRKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELSAAGIAVPLRRKKKRGVDYNAEIPFEKRPASGFYDTSTEVVDPMAPDFSRLRQQHLDGELHSEKEERERRKDKQKLKQRKENDVPQAMLQGDAPARKRSKLVLPEPQVTDQELQQVVKLGRASEAAREAASGGAAAATDALVAQYALTPAPATALRTPAQHDRILMEAQNVMALTHVDTPLKGGLNTPLHESDFSGALPQNQVVATPNTVLATPFRSSRSEVSTPGSFNTPGHGNSQLGLTPGLRDKLNINPEDRVNGGDTPQISHQLQKQAKTSVRNALQSLPVPRNDYEIVVPEQEAGEDKDDSAAVVSVEDQADADARYAKEQEEKRAAELSRRSLAVQRGAARPADVNVSVLRGAASLSALTPLQHAEELLKAEMVTMLHYDALRDPPEGVDKKRAIQLQASHLAYLEQHPYEEFADEELAAAKEALKKEMEVVKAGMSHGDLSIDAYTQVWEECLAQVLFLPGQHRYTRANLASKKDRLESAEKRLEQNRNHMAKEAKKCSKMEKKLRVLTGGYQSRAAALIKQFQELQDQIEQANLELSTFKFLAEQEKAAIPRRIESLTEDVSRQTEREKLLQKRYSELQAEVENMQKGKKSQVSENVNSQKTTA

Summary

Similarity
Belongs to the nuclear hormone receptor family.
EMBL
BABH01010807    BABH01010808    NWSH01003978    PCG65601.1    AGBW02003014    OWR55587.1    + More
ODYU01005387    SOQ46175.1    GEZM01045510    JAV77772.1    KK852667    KDR18926.1    LJIG01022586    KRT79782.1    UFQT01000188    SSX21372.1    CH477583    EAT38672.1    GGFK01008939    MBW42260.1    DS235786    EEB17034.1    AJWK01004110    KQ977513    KYN02210.1    ADMH02001205    ETN63695.1    JXUM01029785    KQ560864    KXJ80581.1    GFDL01013696    JAV21349.1    DS231912    EDS25838.1    NEVH01005885    PNF38472.1    GECZ01005704    JAS64065.1    AXCM01002121    KQ971410    EEZ97534.1    JXUM01012471    KQ560355    KXJ82866.1    KQ981292    KYN43139.1    ATLV01012277    KE524778    KFB36363.1    GL888206    EGI65221.1    AXCN02001199    GL448037    EFN85507.1    KQ769818    OAD52797.1    JRES01000828    KNC28007.1    GBXI01004379    JAD09913.1    KQ980044    KYN18075.1    ACPB03008518    GDKW01000420    JAI56175.1    KQ976746    KYM75332.1    AAAB01008859    EAA08116.4    GAMC01005942    JAC00614.1    KQ414596    KOC69902.1    GAKP01020146    JAC38806.1    GDHF01000847    JAI51467.1    GBGD01000537    JAC88352.1    KQ982783    KYQ50714.1    GECL01002172    JAP03952.1    KZ288416    PBC26042.1    GL442815    EFN62967.1    JXJN01010030    KK107847    QOIP01000005    EZA47440.1    RLU23190.1    GBYB01000128    GBYB01000129    JAG69895.1    JAG69896.1    GL767674    EFZ13308.1    GBHO01019889    GBRD01000839    JAG23715.1    JAG64982.1    CH933816    EDW17158.1    CVRI01000004    CRK87522.1    CM002912    KMY96667.1    CH940647    EDW68805.1    CH480817    EDW49924.1    AE014296    AY061302    AAF47383.2    AAL28850.1    ACZ94585.1    CM000362    EDX07026.1    CH902618    EDV38652.1    PYGN01000927    PSN39298.1    CH954178    EDV50044.1    MWRG01000106    PRD37413.1    CH964101    EDW79544.1    CP012525    ALC44059.1    APGK01049861    KB741158    KB632402    ENN73481.1    ERL94961.1    CM000159    EDW92716.1    OUUW01000009    SPP84819.1    CH379067    EAL31286.2    KK118369    KFM72811.1    GFTR01008022    JAW08404.1    GFAA01001533    JAU01902.1    CH918741    EDW04547.1    GEFH01001612    JAP66969.1    ABJB010203091    ABJB010305387    ABJB010594618    ABJB010891096    ABJB011069076    DS936446    EEC18160.1    GANP01000977    JAB83491.1    GGMS01009977    MBY79180.1    AJVK01030629    AJVK01030630    GBBM01000500    JAC34918.1    GFPF01010747    MAA21893.1   
Pfam
PF11831   Myb_Cef        + More
PF00105   zf-C4
PF00104   Hormone_recep
PF00481   PP2C
PF09316   Cmyb_C
Interpro
IPR001005   SANT/Myb        + More
IPR021786   Cdc5p/Cef1       
IPR009057   Homeobox-like_sf       
IPR017930   Myb_dom       
IPR013088   Znf_NHR/GATA       
IPR001628   Znf_hrmn_rcpt       
IPR000536   Nucl_hrmn_rcpt_lig-bd       
IPR035500   NHR-like_dom_sf       
IPR001723   Nuclear_hrmn_rcpt       
IPR001932   PPM-type_phosphatase_dom       
IPR036457   PPM-type_dom_sf       
IPR015395   C-myb_C       
SUPFAM
SSF46689   SSF46689        + More
SSF48508   SSF48508       
SSF81606   SSF81606       
Gene 3D
PDB
6QDV     E-value=0,     Score=1901

Ontologies

Topology

Subcellular location
Nucleus  
Length:
803
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0002
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00005
outside
1  -  803
 
 

Population Genetic Test Statistics

Pi
239.564948
Theta
201.6393
Tajima's D
1.811432
CLR
0.002131
CSRT
0.853957302134893
Interpretation
Possibly Positive selection
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