SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05230
Pre Gene Modal
BGIBMGA002480
Annotation
PREDICTED:_disintegrin_and_metalloproteinase_domain-containing_protein_10_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 2.337
 

Sequence

CDS
ATGTTTAGTGAAATTGGATACATTACATTTCTTCTACTTGCTTTACCATACATTGAAAGTGCATCTCGCGTTCGTCTTAACGAATACATCGAGCACTTCGAAACGCTAGACTACGATCCAGATGATTTGCATCATCAACACTTGCGAGCTCGACGCTCCACGGATTCTCAACGAGAACTGCGACTCGACTTCAAAGCGCACGACAGGAAATTCAAGTTGCGTTTGCGACGAGACTTGTCCGCTTTCAGCGATGACTTTAAGGTGGAAGGCTCACAAGGACAAACACACGAAGTTGACTCATCGCACATTTACAGCGGAAAACTGGCCGGCGACCCAGACTCGACTGTTTTCGGATCGGTGACGGAAGGTGTCTTCGAGGGGAAGATAATCGCCAAAGACGGTTCTTACTACGTGGAACACGCAAGAAGATACTTCCCACCTAACAACACGAAGACACGAGGCCACTCCGTTATTTACAAAGATAGTGATGTCATTGATCCGTTTGCTAACAAAAGGCACGGTCACGTCGGCGGATGCGGTATAACCGATGAAGTGGTCCAATGGATGGAACGCATTCAGAACTCTGGAGTTGACGATGAATCTCCCACGTCGCCGGCATCTTCACAGTCCACGCCTACTGTCGCAACTCCACCACACACTCACACCTCCGGCTCGCCCTCGCCTCATCCCAATAGCTTAAGAGATGATATGCCAAGACATTGGGATTCACATTTTCACAATAAATATTCGCGGTCCGCGAACACGGGCGAGCATGCGCGTTCGCGTCGAGCAGCGCCGTATGACAACCGCAACACGTGCTCGCTGTTCATACAAACTGATCCCTTAATATGGAAGCATATTCGTGAGGGATTTCCCGACCATAATGTGCCAAGTAAAAAGAACGAAGTCGACACGAAGACTCGGGAAGAGATCCTGTCTCTCATATCGCATCACGTGACTGCCGTCAACTACATCTACGGCAGGGCCAAGTTCGACGGCAGATTCGACCACAGGGACATCAAGTTTGAAGTGCAGAGAATAAAGATCGACGACAACTCACTGTGTAACAATCGTTATCCGAACGAAATGAATCAGTTCTGTTTAACGAACGTTGACGTTTCGAATTTCCTGAATCTCCACTCGCTTGGCAACCACGAGGACTTCTGTCTGGCCTACGTGTTCACGTACAGAGACTTCACCGGGGGGACCCTAGGTCTGGCATGGGTGGCGAGCGCGAGCGGCGCGTCGGGCGGCATCTGCGAGAAGTACAAGACGTACACGGAGACGATCGGCGGCATGTACCAGAGCACCAAGCGCTCGCTCAACACGGGCATCATCACGTTCGTCAACTACAACAGCAGGGTGCCGCCCAAGGTCAGTCAGCTCACGCTGGCGCACGAGATCGGGCACAACTTCGGCTCGCCGCACGACTACCCCTCGGAGTGCCGGCCGGGGGGCCAGCAGGGCAACTACATAATGTTCGCGTCGGCGACGTCCGGCGACCGGCCCAACAACAGCCGGTTCTCGTCGTGCAGCACCGGCAACATCAGCGCCGTGCTGGACGCCGTCAGGGACGGGCGCAAGCGGAACTGCCTCACCGCCAGCGCTGGCGCCTTCTGCGGGAACAAGATCGTCGAGCACGGCGAGGAGTGCGACTGCGGCTACGACGACATCGAGTGCACGGACCGGTGCTGCTACCCGCGCCAGGTCGGCGCCTACGACCGCGAGAGGAACGTCACCGCCAAGGGCTGCACCAGACGCGCCGACACAGAGTGCAGTCCCTCCCAGGGTCCGTGCTGCAACGCGCAGACGTGCCGGTTCGTGGTGGCGGCGCGCAACCAGACGTGTCGCGAGGCGGCCGAGTGCAGCCACGCGGCCGTCTGCTCCGGGGACTCCGCCGATTGCCCCGAGCCCAGTGCCATGCCCAATCACACCAAATGTAACAACGGCACGCAACTGTGCAAGGACGGCGAGTGCAGCGAGTCGATATGTCGCGCGTGGAACATGTCGGTGTGCTACCTGTCGGCCAGCGCGGCCCGCGGCGCCGGCGTCACGGCGCAGCCCAACCGCCGCGCGCTGTGCCAGCTCGCGTGCCAGCAGGGCTCCGACCCCGACTCGTGCCGCAGCACCGCGGACTTCGCCAGCGAGGTCGGCCTGCCCACCGGCGGGATCAGCCTCCTGCCCGGCTCGCCCTGCGACAACTTCCAGGGCTACTGCGACGTGTTCCTGAAGTGCCGCGCCGTGGACGCTGAGGGTCCGCTGGTGCGGCTTAAGAACCTCCTGCTGAACCGCGCCACGCTGCAGTCGGTGCAGGCCTGGGTCACGGAGATGTGGTGGGCGGTGCTGCTGGCCGGGGTGGCGCTCGTCGTGTGCATGGGAGCATTCGTCAAGTGCTGTGCCGTGCATACGCCCTCATCGAATCCGAAACGACCGCCCGCCAGACGGCTCTCGGAGACGCTGCGCGGCCCCATGAACACGCTACGGCGCATGCGCGGACCACGCGGGACTCCGGCTCGGCACCCGCAACGCCGCGCCCGCACGCACAAGGGCTACGCGCCGCCACACACGTACGCGCATCGAGACCTGCCGACGGCGCCGGCTGGACCCAGCGGGCGGCGGGGCGAGCCGTACGCCAACGCGTACCCCGCGGCGTACGAGATGCGGCCCGTGCACAAGATATCGATCCATGTTCCGCTGAGCTTAGCTGCTGACGTGCGACACACAAAACACGGACGGACACTTGAAATTATTTTTATACGATGA
Protein
MFSEIGYITFLLLALPYIESASRVRLNEYIEHFETLDYDPDDLHHQHLRARRSTDSQRELRLDFKAHDRKFKLRLRRDLSAFSDDFKVEGSQGQTHEVDSSHIYSGKLAGDPDSTVFGSVTEGVFEGKIIAKDGSYYVEHARRYFPPNNTKTRGHSVIYKDSDVIDPFANKRHGHVGGCGITDEVVQWMERIQNSGVDDESPTSPASSQSTPTVATPPHTHTSGSPSPHPNSLRDDMPRHWDSHFHNKYSRSANTGEHARSRRAAPYDNRNTCSLFIQTDPLIWKHIREGFPDHNVPSKKNEVDTKTREEILSLISHHVTAVNYIYGRAKFDGRFDHRDIKFEVQRIKIDDNSLCNNRYPNEMNQFCLTNVDVSNFLNLHSLGNHEDFCLAYVFTYRDFTGGTLGLAWVASASGASGGICEKYKTYTETIGGMYQSTKRSLNTGIITFVNYNSRVPPKVSQLTLAHEIGHNFGSPHDYPSECRPGGQQGNYIMFASATSGDRPNNSRFSSCSTGNISAVLDAVRDGRKRNCLTASAGAFCGNKIVEHGEECDCGYDDIECTDRCCYPRQVGAYDRERNVTAKGCTRRADTECSPSQGPCCNAQTCRFVVAARNQTCREAAECSHAAVCSGDSADCPEPSAMPNHTKCNNGTQLCKDGECSESICRAWNMSVCYLSASAARGAGVTAQPNRRALCQLACQQGSDPDSCRSTADFASEVGLPTGGISLLPGSPCDNFQGYCDVFLKCRAVDAEGPLVRLKNLLLNRATLQSVQAWVTEMWWAVLLAGVALVVCMGAFVKCCAVHTPSSNPKRPPARRLSETLRGPMNTLRRMRGPRGTPARHPQRRARTHKGYAPPHTYAHRDLPTAPAGPSGRRGEPYANAYPAAYEMRPVHKISIHVPLSLAADVRHTKHGRTLEIIFIR

Summary

EMBL
BABH01010800    BABH01010801    BABH01010802    BABH01010803    BABH01010804    BABH01010805    + More
GEZM01049082    JAV76115.1    GEZM01049081    JAV76116.1    KQ459220    KPJ02872.1    KQ971379    EFA13242.2    PYGN01000245    PSN50272.1    KX388389    AOT22059.1    GEDC01012649    GEDC01009210    JAS24649.1    JAS28088.1    KQ459984    KPJ18992.1    GFTR01008187    JAW08239.1    GECZ01026790    GECZ01012132    JAS42979.1    JAS57637.1    KQ760129    OAD61840.1    LJIG01016393    KRT80735.1    UFQT01000502    SSX24821.1    SSX24822.1    GFDF01000844    JAV13240.1    GFDF01000843    JAV13241.1    KQ435882    KOX69803.1    KB632314    ERL92203.1    GEBQ01029764    JAT10213.1    GEBQ01014217    JAT25760.1    FX985531    BBF97866.1    AGBW02003014    OWR55590.1    GL453868    EFN75386.1    GL440609    EFN65682.1    KZ288422    PBC25954.1    KK852427    KDR24098.1    UFQS01000031    UFQT01000031    SSW97892.1    SSX18278.1    GBYB01011974    JAG81741.1    LBMM01000540    KMQ98103.1    SSW97891.1    SSX18277.1    KQ978231    KYM96177.1    GBYB01010307    JAG80074.1    ADTU01020779    KQ980775    KYN13236.1    QOIP01000007    RLU20494.1    GL888761    EGI58110.1    KQ982729    KYQ51564.1    GBHO01035104    GBHO01035103    GBHO01035102    GBRD01004395    GBRD01004394    JAG08500.1    JAG08501.1    JAG08502.1    JAG61426.1    KK854102    PTY11324.1    DS235241    EEB13812.1    NEVH01006567    PNF37858.1    CVRI01000038    CRK94254.1    GGMS01011497    MBY80700.1    AXCM01001785    GFXV01002604    MBW14409.1    GGMR01000252    MBY12871.1    ABLF02028257    GDIP01182909    JAJ40493.1    GDIQ01253537    JAJ98187.1    GL732525    EFX89096.1    GDIQ01252239    JAJ99485.1    GDIQ01184098    JAK67627.1    GDIP01227009    JAI96392.1    GDIQ01162603    JAK89122.1    GDIQ01203090    JAK48635.1    GDIQ01190206    JAK61519.1    GDIQ01178602    JAK73123.1    GDIQ01215983    JAK35742.1    GDIP01163461    JAJ59941.1    GDIP01209858    JAJ13544.1    GDIP01200713    JAJ22689.1    GDIP01185560    JAJ37842.1    GDIP01224556    JAI98845.1    GDIP01231156    JAI92245.1    GDIP01212862    JAJ10540.1    GDIQ01220640    JAK31085.1    GDIQ01227036    GDIQ01204889    JAK46836.1    GDIQ01244943    JAK06782.1    GDIQ01212381    JAK39344.1    GDIP01162411    JAJ60991.1    GDIP01184111    JAJ39291.1    GDIP01240511    JAI82890.1    GDIQ01183252    JAK68473.1    GDIP01186667    JAJ36735.1    GDIQ01198994    JAK52731.1    GDIP01197811    JAJ25591.1    GDIP01251503    GDIP01112567    JAI71898.1    GDIP01238014    GDIP01227008    JAI85387.1    GDIQ01041558    JAN53179.1    GDIP01164410    JAJ58992.1    GDIP01201909    JAJ21493.1    GDIQ01013300    JAN81437.1    GDIP01229056    JAI94345.1    GDIP01124066    JAL79648.1    GDIP01236662    JAI86739.1    GDIQ01197594    JAK54131.1    GDIP01179058    JAJ44344.1    GDIP01229057    JAI94344.1    GDIQ01175098    JAK76627.1    GDIQ01228025    JAK23700.1    GECU01010285    JAS97421.1   
Pfam
PF00200   Disintegrin        + More
PF01562   Pep_M12B_propep
Interpro
IPR024079   MetalloPept_cat_dom_sf        + More
IPR036436   Disintegrin_dom_sf       
IPR001762   Disintegrin_dom       
IPR001590   Peptidase_M12B       
IPR002870   Peptidase_M12B_N       
IPR034025   ADAM10_ADAM17       
SUPFAM
SSF57552   SSF57552       
Gene 3D
PDB
6BE6     E-value=3.26257e-102,     Score=953

Ontologies

Topology

SignalP
Position:   1 - 20,         Likelihood:  0.699245
 
 
Length:
920
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
17.93499
Exp number, first 60 AAs:
0.19449
Total prob of N-in:
0.01030
outside
1  -  920
 
 

Population Genetic Test Statistics

Pi
223.548609
Theta
174.184129
Tajima's D
0.456657
CLR
0.796174
CSRT
0.501174941252937
Interpretation
Uncertain
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