Gene
KWMTBOMO05224
Annotation
gag-like_protein_[Bombyx_mori]
Location in the cell
Nuclear Reliability : 3.041
Sequence
CDS
ATGGACGCTGTGTTCGCGGAATTCCTCCGACTTCGTCATCCACAGCTCGCCTCAGAGTTTCTGGCTTTCAAGGCCAATCACACTGCGAGCTCTCTCGAAGACTCCGCCGTGCTCGCTGCTCCTGCGTCGCCTGTACCTGCATGCAAAGCTTCTACATCGAGCACCGCAACCTCCGTCGTGCCTGCCGTTCCCGCGTCGCCTATACTGGCGAGTAAAACTGCTGCGTCGTCCGCCGTGGCCACCGTTCCAGCTGTGCGATCATCCGCGGCCTCGGTCGCGCCCTCCAAAACACCTGCTCGTAGGTCACCGGCGCCCGCCTCCTCGTCCTCCGACTCTGACTCGGAGATGGAGGTCGACCTCGCCCCCGCCTCATCGACGGATGGATTTACCCTGGTACAAAAGGGTAAGAAGCGTGCCGCGGAGTCTCGAGCTCCCGCGGCCGCTAAAATTAGCAAAGCCGCGAACGCGTCGCGCCCCCGCCCCCAGTCTCCCGTTGCGCCTCCAGCCCGTGCCAGTCCGTCGCCGCGTCCGGTGGCACAAAATAAAACCCAGTCCCCTCCTCCGGTAATCCTTCAAGAGAAGGCAGCTTGGGATCGAGTTTCCCTGGCCCTTAAGGCCAAAAATATCAATTTCACGAATGCCCGTAACCTCGCGAACGGCATCCAAATGAAGGTGCATTCATCTGATGACCATAGGGCCCTCACCTCTTACCTCCGTAAGGAGCGTATAAGCTTCCAGACTTATACGCTTCAGGAGGAGCGCGAACTCCGCGTTGTAATACGCGGAATCCCTAAAGAGTTAGATGTAGAGCTCGTAAAAGCCGACCTGTTAGAACAAGGCCTACCAGTGAATTCTGTGCACCGTATGCACACCGGTCGCGGTAGGGAGCCATATAATATGGTTCTAGTCGCTCTCCAGCCTACCCCCGAGGGTAAGAAAATCTTTAACACACAGACCGTCTGTAGGCTCTCTGGTATCGCTGTCGAAGCCCCCCATAAAAAAGGCACTCCTAGCCAGTGCCATAACTGTCAATTGTATGGGCACTCTTCCCGTAACTGTCACGCGCGCCCCCGATGCGTCAAATGTTTAGGCGATCACGCCACGGCCCTATGCACTCGCGATCAAAAAACCGCGACGGAACCGCCTAGCTGCGTCCTGTGTCGAACACAGGGTCACCCCGCAAATTACCGCGGATGCCCCCGAGCCCCGAAAATAAATCGCCGCGTCGCCCGCCAAAACCGCCTCCGAGCTTCCGGCCCAGACATCAAAGCCTCGGCACCCTCTGTGTCGCAGGCTAAGCCAGCGTTCGTTTCGGCGCCGGTGCCCAGTGTCTCGGCCTGGGCGAAACCGCTGCCGTACATGAACACGGCTACAACTCCCTCCTCCGCGATTCGTCCCGCCCCCGCGACTCGTCCCTCTCCCGCGACTTGCCCTCCGACCGCGTCCGACAATCTCGCTTTAGCGATCGACTTCTTTCAGTCGATCAACTTTGAGCGCGTTAACGCTTTGGGCGACGCCATTCGCGCTGCCTCCACTGCACAACACTTTATCGCCGTTGTGCAGGAATACGCCGACGTATACGCGTCATTAAATACGTACGTCCTCCCCTCACTCCGCCGGTAA
Protein
MDAVFAEFLRLRHPQLASEFLAFKANHTASSLEDSAVLAAPASPVPACKASTSSTATSVVPAVPASPILASKTAASSAVATVPAVRSSAASVAPSKTPARRSPAPASSSSDSDSEMEVDLAPASSTDGFTLVQKGKKRAAESRAPAAAKISKAANASRPRPQSPVAPPARASPSPRPVAQNKTQSPPPVILQEKAAWDRVSLALKAKNINFTNARNLANGIQMKVHSSDDHRALTSYLRKERISFQTYTLQEERELRVVIRGIPKELDVELVKADLLEQGLPVNSVHRMHTGRGREPYNMVLVALQPTPEGKKIFNTQTVCRLSGIAVEAPHKKGTPSQCHNCQLYGHSSRNCHARPRCVKCLGDHATALCTRDQKTATEPPSCVLCRTQGHPANYRGCPRAPKINRRVARQNRLRASGPDIKASAPSVSQAKPAFVSAPVPSVSAWAKPLPYMNTATTPSSAIRPAPATRPSPATCPPTASDNLALAIDFFQSINFERVNALGDAIRAASTAQHFIAVVQEYADVYASLNTYVLPSLRR
Summary
Pubmed
Pfam
PF07530 PRE_C2HC
Interpro
IPR006579
Pre_C2HC_dom
Ontologies
GO
Topology
Length:
540
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01485
Exp number, first 60 AAs:
6e-05
Total prob of N-in:
0.00059
outside
1 - 540
Population Genetic Test Statistics
Pi
0
Theta
0
Tajima's D
0
CLR
0.594518
CSRT
0
Interpretation
Uncertain
