SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05220
Pre Gene Modal
BGIBMGA002473
Annotation
olfactory_receptor_64_[Bombyx_mori]
Full name
Odorant receptor      
Location in the cell
PlasmaMembrane   Reliability : 4.852
 

Sequence

CDS
ATGGAGTCTCCGTATTTCGATATACGAACTGAAAAGCGCCGACAAATCTTCGAACACTGGGTCAAAACTCACGAGAGGACGCTAAAGTTCCTACTGTTCTTAGGCAACGGTTCTCTTGCAGCTTGGTATATTCATCCATTAATTGATGAGTTTGAGTACAATTTGATGGTCGGGCTTCGACTGCCGTTCAGTTTCGACACGCCTCTCCGATACTTGTTCACTTACGTCATCGTGCTGATTGCTTTCAACTATACTGCTCATTACGTCATGGTCACAGATCTAATTATGCAATCCTATTTGATACCACTGATCTGTCAGTACGCTGTTCTAGCCGACTGCTTTGAGAATATTTTGATCGACTGCAGTAATGATTATGGAGACCACGATATGGAAATGCATGAACGTAGTTCGGATCCAGCTTTTATTCGAATTTACATGAAAAGGTTAAGTAATTTGGTTGAACAACATTCATTTCTTCTGGACCGCAGTATGGAATTGCGGGCCATATTGAGCCGGCCAATGTTAGGTCAGTTGGCTTCAAGTGGCCTGCTTATTTGCTTTGTTGGATATCAGGCCACAACGTCAATATCAGTGAACATCGTGAAATGTCTGATGAGTTTGTTTTATCTTGGATACAACATGTTCACGCTTTTTGTCGTTTGTCGTTGGTGTGAAGAAATTACGAATAAGAGCTTGAACATTGGCAATGCGGTGTACTGTTCAGGGTGGGAAAGTGGTATGACAGTTGTTCCCACAGTGCGGTCCACCATTCTGCTGGTGATTCTTCGTGCGAACAAGCCGATTGTGTTCACGGCCGGCGGAATGTATAATCTCTCGTTAACATCGTATACTAGTTTGGTGAAAGGATCATACAGCGCTCTAACGTTTCTACTAAGAATTCAACACGAATAA
Protein
MESPYFDIRTEKRRQIFEHWVKTHERTLKFLLFLGNGSLAAWYIHPLIDEFEYNLMVGLRLPFSFDTPLRYLFTYVIVLIAFNYTAHYVMVTDLIMQSYLIPLICQYAVLADCFENILIDCSNDYGDHDMEMHERSSDPAFIRIYMKRLSNLVEQHSFLLDRSMELRAILSRPMLGQLASSGLLICFVGYQATTSISVNIVKCLMSLFYLGYNMFTLFVVCRWCEEITNKSLNIGNAVYCSGWESGMTVVPTVRSTILLVILRANKPIVFTAGGMYNLSLTSYTSLVKGSYSALTFLLRIQHE

Summary

Similarity
Belongs to the insect chemoreceptor superfamily. Heteromeric odorant receptor channel (TC 1.A.69) family.
EMBL
AB472141    BAH66359.1    KF487710    AII01108.1    KX585342    ARO70235.1    + More
KF487673    AII01071.1    LN885118    CUQ99407.1    KF487685    AII01083.1    KT588120    AOE48030.1    KF487674    AII01072.1    KX585343    ARO70236.1    KR935756    ALM26248.1    KY225495    ARO70507.1    KF768696    AIG51890.1    KX084465    ARO76420.1    NWSH01002690    PCG67674.1    GEDO01000062    JAP88564.1    MH193990    AZB49436.1    GENK01000079    JAV45834.1    KU598906    ANZ03152.1    ODYU01008978    SOQ53032.1    KR935755    ALM26247.1    KT588152    AOE48062.1    LC002708    BAR43456.1    MG546621    AYD42244.1    KX655980    AOG12929.1    KM678330    AJE25903.1    MG816618    AXF48803.1    KY399292    AQQ73523.1    GDKB01000056    JAP38440.1    KM892404    AJF23819.1    KY283625    AST36284.1    KM597229    AIT69906.1    KM655567    AIT72016.1    KY707195    AVF19637.1    KY399293    KY399303    AQQ73524.1    AQQ73534.1    KM655566    AIT72015.1    KM892403    AJF23818.1    KM678329    AJE25902.1    GCVX01000217    JAI18013.1    KC960477    AGY14588.1    KY283674    AST36333.1    KM597228    AIT69905.1    KY707236    AVF19678.1    KF768711    AIG51905.1    MF625574    AXY83401.1    RSAL01000231    RVE43840.1    ODYU01011525    SOQ57306.1    KJ542694    AJD81578.1    KJ542703    AJD81587.1    AGBW02012092    OWR45691.1    KY283752    AST36411.1    KX585335    ARO70228.1    FJ170766    ACH73301.1    KT588148    AOE48058.1    MG546609    AYD42232.1    AB472140    BAH66358.1    KF487663    AII01061.1    AB472123    BAH66341.1    PYGN01001353    PSN35479.1    PSN35482.1    NWSH01002961    PCG67211.1    KR935754    ALM26246.1    KY707221    AVF19663.1    JRES01000310    KNC32434.1    KQ459984    KPJ18900.1    KQ459606    KPI91377.1    KM678319    AJE25892.1    KU958208    AQM56037.1    KF487686    AII01084.1    KM892393    AJF23808.1    AB186512    BAG12811.1    AM689922    CAM84018.1    KX609513    KB465925    ARN17920.1    RLZ02205.1    MG816626    AXF48811.1    PSN35478.1    MG816607    AXF48792.1   
Pfam
PF02949   7tm_6
Interpro
IPR004117   7tm6_olfct_rcpt       

Ontologies

Topology

Subcellular location
Cell membrane  
Length:
303
Number of predicted TMHs:
4
Exp number of AAs in TMHs:
89.37731
Exp number, first 60 AAs:
18.52301
Total prob of N-in:
0.96252
POSSIBLE N-term signal
sequence
inside
1  -  29
TMhelix
30  -  49
outside
50  -  68
TMhelix
69  -  91
inside
92  -  173
TMhelix
174  -  193
outside
194  -  197
TMhelix
198  -  220
inside
221  -  303
 
 

Population Genetic Test Statistics

Pi
241.628008
Theta
201.324004
Tajima's D
0.581914
CLR
0.084567
CSRT
0.538473076346183
Interpretation
Possibly Positive selection

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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