SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05218
Pre Gene Modal
BGIBMGA002471
Annotation
PREDICTED:_proton-associated_sugar_transporter_A-like_[Papilio_polytes]
Location in the cell
PlasmaMembrane   Reliability : 4.393
 

Sequence

CDS
ATGGCTGAAAACGAGCGTGCTCAAGAAAGTTTCGATGAGGAACAGGCTCTCGATAAAATTAAGAAAGATAATTCTAGTTATGGAACAGTTGGCCAGTCTGAATCTGCAGAGGCCGGGAACACAATCAGCATATCGGACAGCCCACACGGCGCAGAGCCTCTCTCTTTGGGGCATTATCTCAAGTCGATTGTGGTGATGCCGGGCTCCCTTCGCATCGTTTGCCTCACTAATCTCTTCTGCTGGATGGCACACGTTTGCTATTCATTGTACTTCACCGACTTCGTTGGCGAATCCGTCTTTGGAGGGAATCCAGCGGCGCCAGTTGGAAGTGAAGACCGCATCAACTATGAGGCAGGTGTAAGATTTGGATGTTGGGGAATGGCGATGTATTCTCTATCCTGTGCGTGTTATTCTACAGTCATCGAAAGGCTTATCAAGAAACTTGGCGCCAAGAAGGTTTATGTCGGCGGTCTATGTACGTATAGTTGCGGGATGCTGATGCTTTGCGTACTGCGGGATCCTGCTTCAGTACTTCTATTCAGTTGGACTGCGGGCGTCATGTATTCTACGCTGTTCACGATGCCATATCTACTGGTCGCACATTACCACGCCACTGGGATGTGGGATAGCTCCGGTGGAGGTTGCGGACAGGAACGCGGTATCGGCACAGATGTGGCTGTAGTGAGCAGTTGTGTGTTCGTAGCGCAAATGCTGGTCTCCATTCTCATGGGACTGGCTTTGAAGGTCACAGGATCCACTGCAGCGGTAGTAGCAGTTGCGGCAACGTTAGCCGCTCTTGCTGCGTTCACGGCCACGAAAATTACCTACTTAGATCTGTGA
Protein
MAENERAQESFDEEQALDKIKKDNSSYGTVGQSESAEAGNTISISDSPHGAEPLSLGHYLKSIVVMPGSLRIVCLTNLFCWMAHVCYSLYFTDFVGESVFGGNPAAPVGSEDRINYEAGVRFGCWGMAMYSLSCACYSTVIERLIKKLGAKKVYVGGLCTYSCGMLMLCVLRDPASVLLFSWTAGVMYSTLFTMPYLLVAHYHATGMWDSSGGGCGQERGIGTDVAVVSSCVFVAQMLVSILMGLALKVTGSTAAVVAVAATLAALAAFTATKITYLDL

Summary

EMBL
BABH01010764    RSAL01000231    RVE43841.1    AGBW02012778    OWR44448.1    KQ459984    + More
KPJ18982.1    KQ459220    KPJ02864.1    NWSH01008211    PCG62650.1    JTDY01001346    KOB74135.1    KB631903    ERL87048.1    CP012526    ALC45406.1    APGK01042213    APGK01042214    KB741002    ENN75762.1    GGMR01005161    MBY17780.1    CH477841    EAT35756.1    GDHF01016250    JAI36064.1    GEDC01028842    JAS08456.1    OUUW01000007    SPP83270.1    GDIP01190117    JAJ33285.1    GL768121    EFZ12119.1    CH940657    EDW63160.2    ABLF02027893    JRES01000189    KNC33470.1    GFXV01002528    MBW14333.1    GBXI01013372    JAD00920.1    SPP83269.1    GEDC01016454    JAS20844.1    GDHF01024712    JAI27602.1    CH933806    EDW13910.2    GBBI01003037    JAC15675.1    GFTR01007417    JAW09009.1    GGMS01015398    MBY84601.1    GAMC01002577    JAC03979.1    KQ971312    EEZ98637.2    KQ978684    KYN29303.1    GL888167    EGI66286.1    KQ982610    KYQ53910.1    KQ769179    OAD52952.1    ADTU01020148    ADTU01020149    KZ288226    PBC31872.1    GDIP01156887    JAJ66515.1    GDIP01041639    JAM62076.1    ADMH02000831    ETN64928.1    GDIQ01131628    JAL20098.1    KQ976421    KYM89116.1    GDIQ01115330    JAL36396.1    KQ977171    KYN05177.1    GDIP01235428    JAI87973.1    GFDL01004725    JAV30320.1    GL732529    EFX86786.1    ATLV01017139    KE525157    KFB41796.1    CM000070    KRT00606.1    GDIP01126824    JAL76890.1    UFQT01000487    SSX24709.1    GDIP01112835    JAL90879.1    GL445515    EFN89495.1    CH964232    EDW81615.2    GDIP01239732    JAI83669.1    CH954177    KQS71084.1    AXCM01000646    GFDL01004775    JAV30270.1    QOIP01000007    RLU20666.1    DS235882    EEB20225.1    AXCN02002022    EDY68183.3    KQ434960    KZC12678.1    KK107238    EZA54615.1    GL434335    EFN75002.1    GDIP01058901    JAM44814.1    CCAG010001331    NNAY01000620    OXU27354.1    GDIP01096126    JAM07589.1    JXJN01007683    JXUM01049614    KQ561613    KXJ78000.1    CH892194    KRK05477.1    GECZ01027160    JAS42609.1    AJWK01021476    PYGN01000525    PSN44819.1    GDIP01240873    JAI82528.1    KRK05474.1    KRK05478.1    GECU01035454    JAS72252.1    GECU01011635    JAS96071.1    GDIP01219570    JAJ03832.1    NEVH01006570    PNF37819.1    CH902618    KPU79127.1    AE014296    ALI30498.1    BT012500    AAS93771.1    UFQT01000488    SSX24710.1    AJVK01009608    AJVK01009609   
Pfam
PF07690   MFS_1
Interpro
IPR020846   MFS_dom        + More
IPR011701   MFS       
IPR036259   MFS_trans_sf       
IPR017975   Tubulin_CS       
SUPFAM
SSF103473   SSF103473       

Ontologies

Topology

Length:
279
Number of predicted TMHs:
5
Exp number of AAs in TMHs:
118.0297
Exp number, first 60 AAs:
0.01338
Total prob of N-in:
0.90714
inside
1  -  68
TMhelix
69  -  91
outside
92  -  152
TMhelix
153  -  171
inside
172  -  177
TMhelix
178  -  200
outside
201  -  219
TMhelix
220  -  242
inside
243  -  248
TMhelix
249  -  271
outside
272  -  279
 
 

Population Genetic Test Statistics

Pi
226.291573
Theta
154.631662
Tajima's D
1.523831
CLR
0.349768
CSRT
0.795210239488026
Interpretation
Uncertain
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