Gene

KWMTBOMO05210

Pre Gene Modal

BGIBMGA002436

Annotation

PREDICTED:_uncharacterized_protein_LOC106142857_[Amyelois_transitella]

Location

Bomo_Chr9(-):11082542-11097094      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.388 PlasmaMembrane   Reliability : 1.805

CDS

ATGTCTAAAGAAATGGCGGCGCCGAAGAGGACTGTAGGCCAGAGAATTGTGGAGGAAATTTACACGTGTTGTGCTTTCTGGATAGCTGCATCCGCTTTACCGGCCTTGGCGGTGTCTTATCTCGTTGTACGTGTGAGCAGACATTTATGGCTTAGACTGCTGTCCAGTAGATATCCAGATTTCGAATTCATCAAAACTGACACAGTCAGAACATTGCTGGACACGCATCGGAATCAGGGGATCATTAACGTACTACTGGCCGTGAAAGGTAATCCGAACGTCGATGAAATCAAAGGAAAACTCATAGAGCACGTTATCGACAAACGAGATAGGAATGGACAGTTCATGTTTCCAAGGTTACGACATTTACTCGTCTCATGCTGGGGCAACTACGCTTGGGATGTCAACGTGCGTTTTCGGTTTGAAAACCACTTCATCGTAGCTAATGCTGTGTACAGAGGCCGGCCGGTTACAGAGAGTAATATACAGGAATACATCAGTGACATCGTATCAAAATATTTCTCTCCAGACCAACCGCCCTGGCAATACATAATAATACCGTGTGCAGCTACAGAACCAAAATATTATATTTTAGTTCGCGTGCACCATCTGCTACTATCCGGCGCGAAGTCTATTAACATCGGAGATTTATTACTGGTCGAGCAATTGAAACAAACAGATAGAATGGCTCAAGAATATACACAACAAAGCCCTTTAACGAAATTATTTCCAACGCCTTCTGCCATACCTCAATTGTGGGAAAAGCTTCATGAAAATATGTCGAATACATGGAACGAATTCGTTTCTGAATACGACCCCGTCGAAAGCCCTCGTGCTTTGAAAAGCATGCCGGGTGCGTTCCACGTCGCCGGTCTGTTATTGATATCCAGCGTGAGCGCTTTGAGAGAACTCAACAAGAAATCGAATGGCAGAAACAGAGCCACTGATGGTCCGCTCACAGCAACTACTCTACTTGCAGCAGTGAGAAGAGAATGTAAAAGGAGAAGCTTAACTATAATTAAAGTTTTCTTGTCACCGCTAGTAACAGCAGACCCGAGAAAATGGCCTAAAAGAACATTTAAGACTATCACGACATCGACTGTTTTAATGTTGAAATTACCGTTTCGCGTTCGCGATGAAATTTTAGCTTTAAACGAACTAAAGAATACTGGTCACGTAAAACAGCCTAACACTTTAACGTGGAGGTACGGGGAATTAGCGCAGCTTTGCGTGAGAGCTACTAATGAAGCGTGGAATGGCTTACTAGAAATTTATAGGGCTCCAGCAAAATTGTGGACGGACACCATTAGAACGGACGATGGGAAGCGACACTTGTTACAAGCCGTTTCTCTGTGCGGACGGAAGGTTATATCATGGTCTCGTCCCGTATCCCGAACCGCAATCGAACGCGTGGCTCGGGCGTTGGGCGTATCATCGACAGACGTCGTTTTGTTCGCCGCAACGGATGCCTTACGAGCATTCTTTGAACAAGCACACGGGGACCCGCCTGACATAGTACTCACAACAGCTAGGGCCGCTTCAGAAGATTTCCTATTCACTTTCGCGGAGGGCCAGGGGAAGATGTATAAAAAATCACAAACTGGTGGTATGGTCTGTCTGACCCTGCCTATAGGCGCGAGTCCACGTCGTATCGCCGCCGTAGTGGAACAAGCGTGCAATAGACAGCAGGCATTGGCCGGGGCCTGGGCGGCCCAGGCTCGATGCGGTGCATTAACTAGAGCTGTTCCTTCTCCTCTCGCACGATTAGCATTGAATATACTGTCAAGAAGATACGCAGTGTCTTATGCGGAAATCAACGCACCTCTCAATGCCAAACAACGGGCCACACTGTGGGGTCAGACTGTCGATCACGTTATCTATTGGCGCCCGCCTCAGGCCAATATCAGTATGTCACTAACAGTGATACAATACGGGGAGACGGTGAGGCTGGCCGTGATGGCGGACGCGAGGCTGTCTCCGTCACATTCCGCCCCCACCACGCGATGGCCCGTCGCAGTCGAGCAACTAATCAATAAAGTCGATACGGAAATATCTCGCATAGCCACAACACTACAGCCCGACATCCCTACTGCGGTCGAAACTCGAGAAGCTGACGACACTTACGAGGCAGAAACGTCGCGTGACGTCACCAGCTCGAGCGGACTGAGGCCGCCGGTTTTGACAGCTGTCAGTCCGCCGCCATTGCGACGCAGAATGACGCACCACTGA

Protein

MSKEMAAPKRTVGQRIVEEIYTCCAFWIAASALPALAVSYLVVRVSRHLWLRLLSSRYPDFEFIKTDTVRTLLDTHRNQGIINVLLAVKGNPNVDEIKGKLIEHVIDKRDRNGQFMFPRLRHLLVSCWGNYAWDVNVRFRFENHFIVANAVYRGRPVTESNIQEYISDIVSKYFSPDQPPWQYIIIPCAATEPKYYILVRVHHLLLSGAKSINIGDLLLVEQLKQTDRMAQEYTQQSPLTKLFPTPSAIPQLWEKLHENMSNTWNEFVSEYDPVESPRALKSMPGAFHVAGLLLISSVSALRELNKKSNGRNRATDGPLTATTLLAAVRRECKRRSLTIIKVFLSPLVTADPRKWPKRTFKTITTSTVLMLKLPFRVRDEILALNELKNTGHVKQPNTLTWRYGELAQLCVRATNEAWNGLLEIYRAPAKLWTDTIRTDDGKRHLLQAVSLCGRKVISWSRPVSRTAIERVARALGVSSTDVVLFAATDALRAFFEQAHGDPPDIVLTTARAASEDFLFTFAEGQGKMYKKSQTGGMVCLTLPIGASPRRIAAVVEQACNRQQALAGAWAAQARCGALTRAVPSPLARLALNILSRRYAVSYAEINAPLNAKQRATLWGQTVDHVIYWRPPQANISMSLTVIQYGETVRLAVMADARLSPSHSAPTTRWPVAVEQLINKVDTEISRIATTLQPDIPTAVETREADDTYEAETSRDVTSSSGLRPPVLTAVSPPPLRRRMTHH

Uniprot

A0A194QBD5   A0A2H1VR50   A0A212ESI7   A0A0L7L268   A0A194RN82   D6WW58   + More
A0A067QWP0   A0A1B6MLY5   U5ES27   A0A1Q3FMK7   B0W731   E0VFL2   A0A1Q3FLJ4   J3JU66   U4U357   N6T9H5   A0A2J7QWR0   A0A0A9W240   A0A1Y1ML89   A0A2P8Y963   A0A1W4WSB7   R4FLA5   A0A0T6BE80   A0A1W4WR06   A0A1L8DA55   A0A2J7QWQ7   A0A182GS77   A0A087ZZI5   A0A0K8V616   A0A0A1WI32   A0A1B0EUF8   W8BVW9   A0A1L8D9H6   A0A034VET3   A0A154PJE2   A0A0L7QNC1   A0A310SEE8   A0A1W4V9G7   A0A0L0BZT3   B3MUE8   A0A026WKI8   A0A1I8NB57   A0A3Q0IQM9   Q9VJ41   B4JBK4   A0A1B6FGI0   D3TNF3   A0A0M4ERB9   E2BIZ6   B4P9Z2   A0A1A9WXV5   A0A2A3EM21   B4LUH3   Q29MY8   B4G8I7   E9JCL5   A0A1B0AV44   A0A1A9Y5M8   A0A1I8PJS1   A0A3B0JU31   A0A0J9R590   B3NL87   B4KHY8   A0A0M9A6A1   K7ISI0   A0A158NQA5   A0A1B6C8K1   A0A151JNY5   B4MTS7   A0A336LT33   A0A232EYN5   A0A1B0G0X5   E2B034   A0A1A9ZPS6   A0A1A9VJC5   T1PC59   A0A195B5S7   A0A2S2P3W4   F4WBF4   X1XR31  

Pubmed

26354079    22118469    26227816    18362917    19820115    24845553    + More
20566863    22516182    23537049    25401762    26823975    28004739    29403074    26483478    25830018    24495485    25348373    26108605    17994087    24508170    30249741    25315136    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    20353571    20798317    17550304    15632085    21282665    22936249    20075255    21347285    28648823    21719571   

EMBL

KQ459220    KPJ02853.1    ODYU01003946    SOQ43321.1    AGBW02012778    OWR44458.1    + More
JTDY01003519    KOB69421.1    KQ459984    KPJ18972.1    KQ971361    EFA08670.2    KK853278    KDR09061.1    GEBQ01003019    JAT36958.1    GANO01005001    JAB54870.1    GFDL01006329    JAV28716.1    DS231851    EDS37305.1    DS235115    EEB12168.1    GFDL01006657    JAV28388.1    BT126779    AEE61741.1    KB631578    ERL84405.1    APGK01038972    APGK01038973    KB740966    ENN76909.1    NEVH01009422    PNF33022.1    GBHO01043091    GBHO01043089    GBRD01013308    GDHC01009139    JAG00513.1    JAG00515.1    JAG52518.1    JAQ09490.1    GEZM01028107    JAV86461.1    PYGN01000790    PSN40792.1    ACPB03000196    GAHY01002174    JAA75336.1    LJIG01001289    KRT85651.1    GFDF01010864    JAV03220.1    PNF33020.1    JXUM01016949    KQ560470    KXJ82251.1    GDHF01018013    JAI34301.1    GBXI01015593    JAC98698.1    AJWK01015077    AJWK01015078    AJWK01015079    GAMC01005487    JAC01069.1    GFDF01010955    JAV03129.1    GAKP01017146    JAC41806.1    KQ434924    KZC11584.1    KQ414855    KOC60125.1    KQ779356    OAD51998.1    JRES01001109    KNC25496.1    CH902624    EDV33477.1    KK107167    QOIP01000010    EZA56498.1    RLU17783.1    AE014134    AY058338    AAF53716.2    AAL13567.1    CH916368    EDW04027.1    GECZ01020458    JAS49311.1    EZ422955    ADD19231.1    CP012523    ALC39407.1    GL448543    EFN84341.1    CM000158    EDW90333.2    KZ288212    PBC32805.1    CH940649    EDW64159.1    CH379060    EAL33555.2    CH479180    EDW28667.1    GL771849    EFZ09428.1    JXJN01003956    OUUW01000004    SPP78980.1    CM002910    KMY90889.1    CH954179    EDV54737.2    CH933807    EDW11270.1    KQ435732    KOX77336.1    ADTU01023000    ADTU01023001    GEDC01027723    JAS09575.1    KQ978820    KYN28132.1    CH963852    EDW75516.1    UFQT01000177    SSX21186.1    NNAY01001665    OXU23278.1    CCAG010001389    GL444372    EFN60960.1    KA646274    AFP60903.1    KQ976595    KYM79625.1    GGMR01011491    MBY24110.1    GL888062    EGI68510.1    ABLF02031390    ABLF02037396   

Proteomes

UP000053268    UP000007151    UP000037510    UP000053240    UP000007266    UP000027135    + More
UP000002320    UP000009046    UP000030742    UP000019118    UP000235965    UP000245037    UP000192223    UP000015103    UP000069940    UP000249989    UP000005203    UP000092461    UP000076502    UP000053825    UP000192221    UP000037069    UP000007801    UP000053097    UP000279307    UP000095301    UP000079169    UP000000803    UP000001070    UP000092553    UP000008237    UP000002282    UP000091820    UP000242457    UP000008792    UP000001819    UP000008744    UP000092460    UP000092443    UP000095300    UP000268350    UP000008711    UP000009192    UP000053105    UP000002358    UP000005205    UP000078492    UP000007798    UP000215335    UP000092444    UP000000311    UP000092445    UP000078200    UP000078540    UP000007755    UP000007819   

PRIDE

Q9VJ41   

Pfam

PF06974   DUF1298        + More
PF10220   Smg8_Smg9
PF00651   BTB
PF15288   zf-CCHC_6
PF12157   DUF3591
PF00439   Bromodomain
PF09247   TBP-binding

Interpro

IPR009721   O-acyltransferase_WSD1_C        + More
IPR019354   Smg8/Smg9       
IPR028802   SMG8       
IPR000210   BTB/POZ_dom       
IPR011333   SKP1/BTB/POZ_sf       
IPR036236   Znf_C2H2_sf       
IPR013087   Znf_C2H2_type       
IPR040240   TAF1       
IPR036427   Bromodomain-like_sf       
IPR036741   TAFII-230_TBP-bd_sf       
IPR041670   Znf-CCHC_6       
IPR009067   TAF_II_230-bd       
IPR022591   TFIID_sub1_DUF3591       
IPR018359   Bromodomain_CS       
IPR001487   Bromodomain       

SUPFAM

SSF54695   SSF54695        + More
SSF57667   SSF57667       
SSF47055   SSF47055       
SSF47370   SSF47370       

Gene 3D

1.10.1100.10     1.20.920.10    

ProteinModelPortal

A0A194QBD5   A0A2H1VR50   A0A212ESI7   A0A0L7L268   A0A194RN82   D6WW58   + More
A0A067QWP0   A0A1B6MLY5   U5ES27   A0A1Q3FMK7   B0W731   E0VFL2   A0A1Q3FLJ4   J3JU66   U4U357   N6T9H5   A0A2J7QWR0   A0A0A9W240   A0A1Y1ML89   A0A2P8Y963   A0A1W4WSB7   R4FLA5   A0A0T6BE80   A0A1W4WR06   A0A1L8DA55   A0A2J7QWQ7   A0A182GS77   A0A087ZZI5   A0A0K8V616   A0A0A1WI32   A0A1B0EUF8   W8BVW9   A0A1L8D9H6   A0A034VET3   A0A154PJE2   A0A0L7QNC1   A0A310SEE8   A0A1W4V9G7   A0A0L0BZT3   B3MUE8   A0A026WKI8   A0A1I8NB57   A0A3Q0IQM9   Q9VJ41   B4JBK4   A0A1B6FGI0   D3TNF3   A0A0M4ERB9   E2BIZ6   B4P9Z2   A0A1A9WXV5   A0A2A3EM21   B4LUH3   Q29MY8   B4G8I7   E9JCL5   A0A1B0AV44   A0A1A9Y5M8   A0A1I8PJS1   A0A3B0JU31   A0A0J9R590   B3NL87   B4KHY8   A0A0M9A6A1   K7ISI0   A0A158NQA5   A0A1B6C8K1   A0A151JNY5   B4MTS7   A0A336LT33   A0A232EYN5   A0A1B0G0X5   E2B034   A0A1A9ZPS6   A0A1A9VJC5   T1PC59   A0A195B5S7   A0A2S2P3W4   F4WBF4   X1XR31  

KEGG

101744812    no KO assigned | (RefSeq) uncharacterized LOC101744812

GO

GO:0004144   GO:0016021   GO:0047196   GO:0019432   GO:0005886   GO:0000184   GO:0003676   GO:0003743   GO:0005549   GO:0007608   GO:0016020   GO:0006355   GO:0003677   GO:0001664   GO:0005525   GO:0016491   GO:0003824  

PANTHER

PTHR13091   PTHR13900  

Length:

742

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

22.6785899999999

Exp number, first 60 AAs:

22.62068

Total prob of N-in:

0.99213

POSSIBLE N-term signal

sequence

inside

1  -  20

TMhelix

21  -  43

outside

44  -  742

 

 

Pi

201.556199

Theta

172.627492

Tajima's D

0.587426

CLR

0.16377

CSRT

0.547322633868307

Interpretation

Possibly Positive selection