SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05204  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA002439
Annotation
PREDICTED:_putative_methyltransferase_C9orf114_[Amyelois_transitella]
Location in the cell
Nuclear   Reliability : 2.942
 

Sequence

CDS
ATGTCTGAACTAGTAGATACTAAACCTCCAGGCAAGAGTTGGCGTGAAATAAACAAAGAAAGGAAGTCACTAAAACGCAAGCGTAACGAAGAGAAAATTATCAAACGCGAGAAAAGGGTTGCCTTGGAAAAGGAAGTCCAAGATAAGGCTAAAGAAGAAGAAGAGCGCGAGAAGAAGTGTTTAGAAATTTCTACTGTTAGTATAGCTGTCCCCAGTTCTATATTAGAAAATGCTCAATCTGCAGAGCTACGTACTTATCTTGCTGGACAAATAGCCAGGGCGGCCTGTGTCTTTTGCGTCGATGAAGTAATAGTCTATGATGACATAGGTGAAAAATTAAATACAAAAAAATCTAAATTAGAGGATTCTGATGGTGTGAAAGTGGCTAGAAAGAGTTGTGTACAGTTAGCACGTATACTCCAGTACTTGGAATGTCCACAATACTTAAGAAAGCACTTTTTTCCAATACATAAAGATCTCCAGTTTGCAGGTCTACTCAATCCATTGGATGCTCCACATCATTTGAGACAGACAAATGATTTTAAATTCAGGGAAGGCATTACTATGAATAAGAAAGTGAAACCCGGTAAAGGATCGCAAGTGAATGTTGGATTGTTGCAGGATGTATCAACTGATAAATTACTAAATCCTGGTATGAGAGTTACAGTTAGAATGCTGCCTGCATTAAAAAATGGCAAGAAACTAAAAGGGAAGATTGTTAGTTTAACAACACCAAGGGCAGAGACAGGTGTTTATTGGGGTTATACTGTAAGGATTGCTAGTACATTGAGCCAAGTTTTCACTCAGTGTCCATACAAAGATGGATATGATGTTACAATAGGCACGTCTGACAGAGGATTATCAATTGACACATTACCTGATAAAGAAGTCAAATACAATCATGTTTTGATAGTTTTTGGTGGACTACATGGAATAGAAGCAGCATTGGAAAGTGATGAGCAATTAAAAGTAAATGATGCAAGTTTGTTATTCAATCATTATGTCAATGTATTACCGTCTCAAGGATCAAGGACAATTCGAACAGAGGAAGCTATATTGATAGCTTTATCAGGATTAAGAAATAAATTGCAGGCAAATAATGAACCAATGGTGTTTAAAGGTTCTGGCATTGCTCTTAGTTCTGCATTCCCTAACTTCAAACCAGATTCTGATCATTCTGGTGCAGAAAATAATGTAGATTTAAGCAGGTTTGATTAA
Protein
MSELVDTKPPGKSWREINKERKSLKRKRNEEKIIKREKRVALEKEVQDKAKEEEEREKKCLEISTVSIAVPSSILENAQSAELRTYLAGQIARAACVFCVDEVIVYDDIGEKLNTKKSKLEDSDGVKVARKSCVQLARILQYLECPQYLRKHFFPIHKDLQFAGLLNPLDAPHHLRQTNDFKFREGITMNKKVKPGKGSQVNVGLLQDVSTDKLLNPGMRVTVRMLPALKNGKKLKGKIVSLTTPRAETGVYWGYTVRIASTLSQVFTQCPYKDGYDVTIGTSDRGLSIDTLPDKEVKYNHVLIVFGGLHGIEAALESDEQLKVNDASLLFNHYVNVLPSQGSRTIRTEEAILIALSGLRNKLQANNEPMVFKGSGIALSSAFPNFKPDSDHSGAENNVDLSRFD

Summary

EMBL
BABH01010717    ODYU01005802    SOQ47055.1    KQ459984    KPJ18964.1    KQ459220    + More
KPJ02844.1    RSAL01000293    RVE42868.1    GAIX01013858    JAA78702.1    AGBW02012778    OWR44466.1    JTDY01002386    KOB71523.1    NEVH01026136    PNF14519.1    KQ971380    EEZ97573.1    AAZX01006711    KK852570    KDR21169.1    NNAY01000061    OXU31409.1    KZ288376    PBC26664.1    ADTU01004623    GL888207    EGI65053.1    KQ979021    KYN24362.1    GL768421    EFZ11331.1    LBMM01001837    KMQ95671.1    CH479181    EDW32196.1    CP012524    ALC41200.1    GDAI01002355    JAI15248.1    CM000071    EAL25273.1    KQ978473    KYM93688.1    GL438234    EFN69283.1    CH940648    EDW59934.1    APGK01043770    KB741017    ENN75266.1    CH933808    EDW08634.1    GFDF01010350    JAV03734.1    AY118466    AAM49835.1    KB631644    ERL84950.1    BT122034    ADD31614.1    KQ414605    KOC69635.1    ATLV01012358    KE524785    KFB36541.1    GAMC01018530    JAB88025.1    AJWK01000701    KA650294    AFP64923.1    KQ981685    KYN38049.1    UFQS01000375    UFQT01000375    SSX03337.1    SSX23703.1    CH902619    EDV36344.2    CVRI01000040    CRK94906.1    GL448858    EFN83616.1    OUUW01000001    SPP73632.1    CH963849    EDW74506.1    JXJN01006375    JXJN01006376    GBXI01006771    JAD07521.1    CH916367    EDW01743.1    KK107293    QOIP01000005    EZA53287.1    RLU22489.1    CH954177    EDV58172.1    KQ760123    OAD61854.1    GANO01002465    JAB57406.1    JXUM01034236    KQ561017    KXJ80018.1    AJVK01000724    CM002911    KMY92642.1    AE013599    AAF58861.1    CH477722    EAT36903.1    GGFM01004626    MBW25377.1    GGFM01007628    MBW28379.1    CM000157    EDW89592.2    CM000362    EDX06434.1    GDHF01029127    JAI23187.1    GGFJ01005603    MBW54744.1    GEZM01052519    JAV74466.1    GFDL01014845    JAV20200.1    GAKP01012557    JAC46395.1    APCN01000213    AXCM01000276    GAKP01012558    JAC46394.1    AAAB01008807    EDO64539.1    ADMH02002032    ETN59855.1    GECU01037321    JAS70385.1    GGFK01007590    MBW40911.1    GEDC01009070    JAS28228.1    GECU01006289    JAT01418.1    CCAG010003795    CCAG010003796    GFAC01001365    JAT97823.1    DS231961    EDS29243.1    GEDV01010090    JAP78467.1    GACK01007439    JAA57595.1   
Pfam
PF02598   Methyltrn_RNA_3
Interpro
IPR029026   tRNA_m1G_MTases_N        + More
IPR012340   NA-bd_OB-fold       
IPR003750   Put_MeTrfase       
IPR029028   Alpha/beta_knot_MTases       
IPR036612   KH_dom_type_1_sf       
SUPFAM
SSF75217   SSF75217        + More
SSF50249   SSF50249       
SSF54791   SSF54791       
Gene 3D
PDB
4RG1     E-value=1.41717e-95,     Score=892

Ontologies

Topology

Length:
405
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.002
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00313
outside
1  -  405
 
 

Population Genetic Test Statistics

Pi
236.648535
Theta
200.61447
Tajima's D
0.594682
CLR
0.201044
CSRT
0.543272836358182
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
27530593 RRDESGDESDASAAPDLDSDDDEVPYNPKN 100.00 7e-16
27530593 RLQETQDSSNESENDEEQPRPRK 100.00 7e-16
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