SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05199
Pre Gene Modal
BGIBMGA002459
Annotation
PREDICTED:_uncharacterized_protein_LOC106115799_[Papilio_xuthus]
Location in the cell
PlasmaMembrane   Reliability : 3.592
 

Sequence

CDS
ATGAAAGTGTTAAAATTGAATCTCATAATTATATTGATTCACGTTTGTTGTGGCCATAAAGATGTGCTACCAACGTTTTTATTGGATCACAGCAATGTTTTAAAAGATATTGATATACCACCAAATCCCTTCAGCACTATGAGCTCTGCAAAGTTTGCTGACATAATACGGGAAACAATCAAACGTACCGAAGGTATAATAATTTTCGTTGAAGAGCTCTTGAGTTTTGAGGAAATCACCGCAAAAGATAAATTGGGAACTCCGTTTACTCATTTACGCAGAGGTTTGATTGAAAGAAAAGTCAAATTCTTTCCAGCTGTTTTTGAGCCGTATAAAGTACTCGCTCAAATCTTTCATTCCCTGCATTACAATACTTTTCATTTAGATTCTGCGTATAATTTATCACTCAAGAGCGCCAGCTATATCTACGTATTTTTTAACGACTACGAAAACGAAACTAGGACTATGGCTCTCAGGAGACACGATACCATCATAAGAGATGTTTACATGAACATGCAAGAGTTACAACGAGGGCCTATTGTAGCATTCTACACCGGCAAAACCAATCCGGCCGTTATAGAGAAACCGCGCTTCATATCGATAGAGCCAATGCCTTCAGTCAATAATTTGGATGTTACGGTTGTTTCTGAAGGCGCCATGTTCCGATTTTCCGGAGTGACTGTTGCGACTCCAACACGTCGAGCTACTTTTAATCAAATGCCCGTTGTAGCCGAGGAAACGTGGAGCCGAAATAAATTATCAACGAAAGTCGCATATACCGACTTTGAATTATTATTTAATTTCGATTTGACGCGACAAGACGAGTGGGTACTTGAAAATATAGCTCTTTTAGAAGCAGGTGAAGAAGTCGGTCGGACTAACGTTTTTGCCAAAGCTCCGTGGAACTGGTCTTATGCTTGTGGTGAACCTTTGCAGATAGTAAACACACGTGACGGCAGCTCCATAGCTATACCCCGTTATCGAATTCAGCCTCTTGGACCGTCCATAATTCTTCGAAATGGATCTAGTAGCAATGTGACTTTTGGACCGACAGTGAACTGCTGCCCTTACTTCAGTGTCCCAATATTATCGTGCCTTGCTATTTCTTTGTTGTGCTTAATGTTTCTTGCGCAAGGCATTACAGTTTTATTTAACTGCGCATCAAATAGTAAATTTGATGACCCTCATAATCCACCATTAGTGTACGAAACTCAGTAA
Protein
MKVLKLNLIIILIHVCCGHKDVLPTFLLDHSNVLKDIDIPPNPFSTMSSAKFADIIRETIKRTEGIIIFVEELLSFEEITAKDKLGTPFTHLRRGLIERKVKFFPAVFEPYKVLAQIFHSLHYNTFHLDSAYNLSLKSASYIYVFFNDYENETRTMALRRHDTIIRDVYMNMQELQRGPIVAFYTGKTNPAVIEKPRFISIEPMPSVNNLDVTVVSEGAMFRFSGVTVATPTRRATFNQMPVVAEETWSRNKLSTKVAYTDFELLFNFDLTRQDEWVLENIALLEAGEEVGRTNVFAKAPWNWSYACGEPLQIVNTRDGSSIAIPRYRIQPLGPSIILRNGSSSNVTFGPTVNCCPYFSVPILSCLAISLLCLMFLAQGITVLFNCASNSKFDDPHNPPLVYETQ

Summary

Pfam
PF05827   ATP-synt_S1
Interpro
IPR008388   ATPase_V1-cplx_s1su       

Ontologies

Topology

SignalP
Position:   1 - 18,         Likelihood:  0.900155
 
 
Length:
405
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
18.64286
Exp number, first 60 AAs:
0.06048
Total prob of N-in:
0.11695
outside
1  -  405
 
 

Population Genetic Test Statistics

Pi
187.945395
Theta
137.747791
Tajima's D
1.062005
CLR
1.880814
CSRT
0.676016199190041
Interpretation
Uncertain
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