SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05198
Pre Gene Modal
BGIBMGA002458
Annotation
neuropeptide_receptor_A22_[Bombyx_mori]
Full name
RYamide receptor      
Alternative Name
Neuropeptide Y-like receptor
Location in the cell
PlasmaMembrane   Reliability : 4.954
 

Sequence

CDS
ATGTATAGCGCAGTGTTTTTAGTTGCGCTTTTGGGAAATGGATTAGTGTGTTTCATTGTTCACACATCTCCTCGTATGAAGACGGTCACGAATTATTTTATAGTGAACCTGGCAGTCGGAGATATCCTGATGACGTTGTTCTGTGTGCCGTTTTCTTTCGTGTCAATGCTTGTACTGCGGTATTGGCCCTTTGGTGCGGTTATGTGCAAAGTTGTCAACTTCTCACAAGCGGTTTCGGTACTAGTCAGCGCATACACGCTACTCGCCATATCCATTGACAGATACATAGTTATAATGCGGCCATTAAAGCCTCGACTTGGGAAAGGTGCAGCTAAAATGGTCGTCGCTGCTGTTTGGGGAGGAGCCATTATAACGGCAGCGCCGATTCCTATAGTTTCTCAGCTACAGCGACCTTCGCCTTGGCATGAGGCTTGTAAAGTTGACATCTGCAGCGAACAGTGGGCCGATGGAAAACAAAGCGAGCATTATACGTTTGCTTTATTGACACTGCAATTTACTTTGCCATTGACCGCTCTCGTTTACACGTACGGGCGAATAGCGCATTTTGTATGGGGCGGTCGACCACCTGGAGAAGCAGAAAGCGGTCGGGACTCGCGGCTGCAACTCTCCAAAAGGAAAATGATCAAAATGATGGTCACAGTAGTGGCGGTGTTTGTAGTTTGCTGGTTACCGCTCAATATCTTTATTGTAAGTAGCATTTGTTTCTTAATTGTACTAGTATAG
Protein
MYSAVFLVALLGNGLVCFIVHTSPRMKTVTNYFIVNLAVGDILMTLFCVPFSFVSMLVLRYWPFGAVMCKVVNFSQAVSVLVSAYTLLAISIDRYIVIMRPLKPRLGKGAAKMVVAAVWGGAIITAAPIPIVSQLQRPSPWHEACKVDICSEQWADGKQSEHYTFALLTLQFTLPLTALVYTYGRIAHFVWGGRPPGEAESGRDSRLQLSKRKMIKMMVTVVAVFVVCWLPLNIFIVSSICFLIVLV

Summary

Description
Receptor for the neuropeptides RYamide-1 and RYamide-2 (PubMed:21843505, PubMed:21704020). The activity of this receptor is mediated by G proteins which activate a phosphatidyl-inositol-calcium second messenger system (PubMed:21843505, PubMed:21704020). RYamide signaling may suppress feeding behavior (PubMed:21704020).
Similarity
Belongs to the G-protein coupled receptor 1 family.
Keywords
Cell membrane   Complete proteome   G-protein coupled receptor   Glycoprotein   Membrane   Receptor   Reference proteome   Transducer   Transmembrane   Transmembrane helix  
Feature
chain  RYamide receptor
EMBL
AB330443    BAG68421.1    ODYU01000259    SOQ34722.1    KT031020    ALM88318.1    + More
AB330440    BAG68418.1    KT031017    ALM88315.1    ODYU01003776    SOQ42958.1    JTDY01002261    KOB71780.1    KQ459984    KPJ18959.1    GAMC01008932    JAB97623.1    GAMC01008931    JAB97624.1    AB817303    BAO01070.1    KQ459597    KPI94747.1    CH964232    EDW81401.2    CH902623    EDV30401.2    KPU72827.1    UFQS01000647    UFQT01000567    UFQT01000647    SSX05744.1    SSX25373.1    GECZ01003504    JAS66265.1    CM000070    KRT00006.1    EIM52478.1    JQ433061    AFJ42283.1    CH933806    EDW14515.1    CH940650    EDW67432.2    GECU01031343    JAS76363.1    KC439535    AGX85003.1    AB817304    BAO01071.1    AAAB01008846    EAA06194.6    KRT00007.1    OUUW01000005    SPP80546.1    GEBQ01031640    GEBQ01026161    JAT08337.1    JAT13816.1    KQ435012    KZC13832.1    KQ760123    OAD61850.1    KZ288376    PBC26670.1    AE014297    AHN57552.1    JN234381    BT015303    M81490    AAT94531.1    JRES01001712    KNC20611.1    AHN57551.1    JXJN01015848    CCAG010006669    CH477341    EJY57582.1    AJWK01013567    CVRI01000006    CRK88026.1    BABH01010701    GGMR01005151    MBY17770.1    CH916369    EDV92796.1    AXCM01000048    KQ414734    KOC62323.1    GFXV01005684    MBW17489.1    PYGN01000356    PSN47797.1    APCN01001400    CH479179    EDW23991.1    ADMH02001126    ETN64027.1    AXCN02001397    ABLF02032190    ABLF02032192    DS233047    EDS27732.1    KC439538    AGX85006.1    DQ005188    AAY46405.1    KC439537    AGX85005.1    CM000160    EDW98558.1    CH477497    EAT39936.1    CH954182    EDV53475.1    GEDC01021184    GEDC01009041    JAS16114.1    JAS28257.1    CH480828    EDW45186.1    GL732531    EFX85694.1    AH013422    AY347941    AY347942    AY347944    AY347945    AAR28374.1    CM000364    EDX14620.1    CAEY01001957    KK120754    KFM78969.1    GDIP01053955    JAM49760.1    GDIP01244017    GDIP01169617    JAJ53785.1    NEVH01021198    PNF19968.1    GDIQ01049951    JAN44786.1    CP012526    ALC45594.1    CH900018    EAT32417.2    DS235639    EEB16147.1    MWRG01011857    PRD25747.1    KF309026    AHE76193.1    GEGO01005714    JAR89690.1    LRGB01000770    KZS16035.1    MG550209    AWT50643.1    GDIQ01013001    JAN81736.1    GDIQ01201287    JAK50438.1   
Pfam
PF00001   7tm_1        + More
PF06585   JHBP
PF03103   DUF243
Interpro
IPR000276   GPCR_Rhodpsn        + More
IPR000611   NPY_rcpt       
IPR017452   GPCR_Rhodpsn_7TM       
IPR010562   Haemolymph_juvenile_hormone-bd       
IPR038606   To_sf       
IPR001681   Neurokn_rcpt       
IPR005395   NPFF_rcpt       
IPR004145   DUF243       
Gene 3D
PDB
5ZBQ     E-value=1.37911e-20,     Score=243

Ontologies

Topology

Subcellular location
Cell membrane  
Length:
247
Number of predicted TMHs:
6
Exp number of AAs in TMHs:
129.92288
Exp number, first 60 AAs:
41.38705
Total prob of N-in:
0.02522
POSSIBLE N-term signal
sequence
outside
1  -  3
TMhelix
4  -  21
inside
22  -  33
TMhelix
34  -  56
outside
57  -  75
TMhelix
76  -  98
inside
99  -  109
TMhelix
110  -  132
outside
133  -  161
TMhelix
162  -  184
inside
185  -  220
TMhelix
221  -  243
outside
244  -  247
 
 

Population Genetic Test Statistics

Pi
257.014715
Theta
140.032803
Tajima's D
2.647077
CLR
0.171765
CSRT
0.95785210739463
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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