Gene

KWMTBOMO05195

Pre Gene Modal

BGIBMGA002443

Annotation

PREDICTED:_leucine-rich_repeat-containing_protein_C10orf11-like_[Amyelois_transitella]

Location

Bomo_Chr9(-):10672711-10687905      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.044

CDS

ATGGAGGAAACACACATTAACAATTTTGCTTTATCCTTCACCAATAACGTTCTAAGCTATTGCGGGCAAGACTGTAAAAAAATTCCACCGGCCTTACAGAAAATGTATGGTGCCAAAGTGAAATGTTTAGATCTAAGTTACAACAGTATCGAAACATTAAAGGGTCTCGAACAGTTCGCGAGGCTGGAGGAGTTGATTTTAGACAACAACCAGTTGAGTGACGGAATCAAGTTTCCAAAGTTGCCATATTTAAAAACTCTGTCCCTCAATAATAATCAGATAGCCAATTTGGAGGATCTCGTTGATAAAATAAGGGAGAACTTCCCCGTGTTGTCTTACCTCAGTCTTCTAAGTAACAAAGCGTGTCCCAACCAACTTTCCGACGTTGACAAAGACGACTCCGACTACCAAAGATACAGGTACTATGTGATATACAAGATACCGCACCTGCGTTTTTTGGACTCACGTCGCGTCACCACCACTGAGCGCAGGGAGGCGGCAGTGCGCGGTGAGTTCATGAAGGTTCGGAGACCACCAGACGTACCGGATGCCGGACCCTCGATCGCTTCACCGGTCGTAGCCGCCGGAGGTCAACGACCCCTACCTATTGATCTCTCCGCGGTGGGCAAACACAAAGGTGCCTACGGTAAATGTCTATACAAGTACACGGGCAAACATTCAGAAGGAAACAGATTTATTCTCAACAGTGATTTGTAA

Protein

MEETHINNFALSFTNNVLSYCGQDCKKIPPALQKMYGAKVKCLDLSYNSIETLKGLEQFARLEELILDNNQLSDGIKFPKLPYLKTLSLNNNQIANLEDLVDKIRENFPVLSYLSLLSNKACPNQLSDVDKDDSDYQRYRYYVIYKIPHLRFLDSRRVTTTERREAAVRGEFMKVRRPPDVPDAGPSIASPVVAAGGQRPLPIDLSAVGKHKGAYGKCLYKYTGKHSEGNRFILNSDL

Uniprot

H9IYV8   S4PMC7   A0A212FDY2   A0A1E1WVJ2   A0A194RMA5   A0A2H1WR62   + More
A0A067RDY1   D6W9V3   U4U4E6   N6U5W1   A0A1Y1LIU3   E0W407   A0A1B6DH57   T1J5B4   A0A1B6DL76   A0A1B6DH05   X1WJI7   A0A069DPV6   A0A0V0G836   A0A023F7P0   A0A0P4VYM3   R4FMJ7   A0A3B4D914   A0A2G8LCA0   A0A1B6DTB8   A0A2L2Y1J4   A0A0D2U247   A0A1B6LW63   A0A1B6H905   A0A3Q1HEN4   A0A0K8RTL2   A0A2J7QSU2   K1QB55   A0A3B3XTG8   A0A3Q3L2W3   I3KQD1   A0A3B3BHJ2   A0A1B6DBQ5   W5UH62   A0A3P9PLZ4   A0A3Q3IVU2   A0A3Q3SVX7   A0A3Q2EB48   A0A3P9KCB4   A0A3B5RBA3   A0A3Q2X1K3   A0A3Q1C3Q2   A0A2P8XQL1   A0A3P8PVR2   A0A3P9DRW7   A0A1S3N676   A0A2D4FVQ7   A7RSR9   A0A1S3N5H3   Q3KQ59   A0A2S2NXN8   H2LQB5   Q501Y0   A0A3P9J9P4   A0A1A8CT73   R7V191   A0A3B4UAR3   A0A0B7AEY4   A0A3P8STR7   A0A3B4UCE4   A0A3Q3IVX7   A0A2R8M5X1   A0A2K5CS90   A0A146YJH6   A0A2R9AP76   A0A2I4AYI8   H2R7N4   A0A147AWY2   A0A087WWI0   A0A3P9AM42   G3QJD5   A0A3B5KQQ7   A0A293MS39   A0A3B4UA17   A0A2Y9THW3   A0A287CT40   H2NAH5   A0A1S3WWX5   V5HZE3   A0A3B4UAN4   B7PYZ7   A0A3B4UAL4   A0A3Q0SFP3   A0A2K5PKP0   A0A3Q3B898   A0A3Q4HKR8   A0A2K6BD58   A0A2K6U1M2   A0A383YV83   A0A131Y4T6   A0A3B3SJC2   A0A2S2PZP7   A0A3B5JXM6   A0A341B0D8  

Pubmed

19121390    23622113    22118469    26354079    24845553    18362917    + More
19820115    23537049    28004739    20566863    26334808    25474469    27129103    29023486    26561354    25727380    22992520    25186727    29451363    23127152    17554307    23542700    29403074    17615350    23594743    23254933    22722832    16136131    15164054    18088087    25944712    25069045    22398555    21551351    25765539    29240929   

EMBL

BABH01010691    GAIX01003630    JAA88930.1    AGBW02008996    OWR51930.1    GDQN01000019    + More
JAT91035.1    KQ459984    KPJ18958.1    ODYU01010078    SOQ54924.1    KK852756    KDR17080.1    KQ971312    EEZ98550.1    KB631698    ERL85461.1    APGK01038523    KB740960    ENN77000.1    GEZM01058156    GEZM01058155    JAV71865.1    DS235886    EEB20363.1    GEDC01012348    JAS24950.1    JH431856    GEDC01010906    JAS26392.1    GEDC01012350    JAS24948.1    ABLF02036638    GBGD01002781    JAC86108.1    GECL01001944    JAP04180.1    GBBI01001464    JAC17248.1    GDKW01001935    JAI54660.1    ACPB03017461    GAHY01001689    JAA75821.1    MRZV01000130    PIK57835.1    GEDC01008376    JAS28922.1    IAAA01005356    IAAA01005357    IAAA01005358    LAA02031.1    KE346360    KJE89301.1    GEBQ01012062    GEBQ01004131    JAT27915.1    JAT35846.1    GECU01036593    GECU01030923    JAS71113.1    JAS76783.1    GBKC01001946    JAG44124.1    NEVH01011214    PNF31660.1    JH823244    EKC31138.1    AERX01027542    AERX01027543    AERX01027544    AERX01027545    AERX01027546    AERX01027547    GEDC01014228    JAS23070.1    JT415085    AHH40914.1    PYGN01001523    PSN34291.1    IACJ01090563    LAA51326.1    DS469535    EDO45508.1    BC106374    AAI06375.1    GGMR01009308    MBY21927.1    BX005232    BX323799    BX469897    BX511130    CR751563    CT025897    BC095822    AAH95822.1    HADZ01019008    SBP82949.1    AMQN01005463    KB296106    ELU12247.1    HACG01032704    CEK79569.1    GCES01031992    JAR54331.1    AJFE02041455    AJFE02041456    AJFE02041457    AJFE02041458    AJFE02041459    AJFE02041460    AJFE02041461    AJFE02041462    AJFE02041463    AJFE02041464    AACZ04050434    AACZ04050435    AACZ04050436    AACZ04050437    AACZ04050438    NBAG03000223    PNI75297.1    GCES01003277    JAR83046.1    AC010997    AC012047    AL136451    AL589863    AL596260    AL607027    AL645925    AL731568    KF455264    CABD030069825    CABD030069826    CABD030069827    CABD030069828    CABD030069829    CABD030069830    CABD030069831    CABD030069832    CABD030069833    CABD030069834    GFWV01018975    MAA43703.1    AGTP01042140    AGTP01042141    AGTP01042142    AGTP01042143    AGTP01042144    AGTP01042145    AGTP01042146    AGTP01042147    AGTP01042148    AGTP01042149    ABGA01205206    ABGA01205207    ABGA01205208    ABGA01205209    ABGA01205210    ABGA01205211    ABGA01205212    ABGA01205213    ABGA01205214    ABGA01205215    NDHI03003469    PNJ40474.1    GANP01004375    JAB80093.1    ABJB010295408    DS822941    EEC11819.1    GEFM01002865    JAP72931.1    GGMS01001793    MBY70996.1   

Proteomes

UP000005204    UP000007151    UP000053240    UP000027135    UP000007266    UP000030742    + More
UP000019118    UP000009046    UP000007819    UP000015103    UP000261440    UP000230750    UP000008743    UP000265040    UP000235965    UP000005408    UP000261480    UP000261660    UP000005207    UP000261560    UP000221080    UP000242638    UP000261600    UP000261640    UP000265020    UP000265180    UP000002852    UP000264840    UP000257160    UP000245037    UP000265100    UP000265160    UP000087266    UP000001593    UP000001038    UP000000437    UP000265200    UP000014760    UP000261420    UP000265080    UP000008225    UP000233020    UP000240080    UP000192220    UP000002277    UP000005640    UP000265140    UP000001519    UP000005226    UP000005215    UP000001595    UP000079721    UP000001555    UP000261340    UP000233040    UP000264800    UP000261580    UP000233120    UP000233220    UP000261681    UP000261540    UP000252040   

PRIDE

H9IYV8    B7PYZ7   

Pfam

PF00001   7tm_1

Interpro

IPR032675   LRR_dom_sf        + More
IPR001611   Leu-rich_rpt       
IPR000276   GPCR_Rhodpsn       
IPR017452   GPCR_Rhodpsn_7TM       

Gene 3D

3.80.10.10    

ProteinModelPortal

H9IYV8   S4PMC7   A0A212FDY2   A0A1E1WVJ2   A0A194RMA5   A0A2H1WR62   + More
A0A067RDY1   D6W9V3   U4U4E6   N6U5W1   A0A1Y1LIU3   E0W407   A0A1B6DH57   T1J5B4   A0A1B6DL76   A0A1B6DH05   X1WJI7   A0A069DPV6   A0A0V0G836   A0A023F7P0   A0A0P4VYM3   R4FMJ7   A0A3B4D914   A0A2G8LCA0   A0A1B6DTB8   A0A2L2Y1J4   A0A0D2U247   A0A1B6LW63   A0A1B6H905   A0A3Q1HEN4   A0A0K8RTL2   A0A2J7QSU2   K1QB55   A0A3B3XTG8   A0A3Q3L2W3   I3KQD1   A0A3B3BHJ2   A0A1B6DBQ5   W5UH62   A0A3P9PLZ4   A0A3Q3IVU2   A0A3Q3SVX7   A0A3Q2EB48   A0A3P9KCB4   A0A3B5RBA3   A0A3Q2X1K3   A0A3Q1C3Q2   A0A2P8XQL1   A0A3P8PVR2   A0A3P9DRW7   A0A1S3N676   A0A2D4FVQ7   A7RSR9   A0A1S3N5H3   Q3KQ59   A0A2S2NXN8   H2LQB5   Q501Y0   A0A3P9J9P4   A0A1A8CT73   R7V191   A0A3B4UAR3   A0A0B7AEY4   A0A3P8STR7   A0A3B4UCE4   A0A3Q3IVX7   A0A2R8M5X1   A0A2K5CS90   A0A146YJH6   A0A2R9AP76   A0A2I4AYI8   H2R7N4   A0A147AWY2   A0A087WWI0   A0A3P9AM42   G3QJD5   A0A3B5KQQ7   A0A293MS39   A0A3B4UA17   A0A2Y9THW3   A0A287CT40   H2NAH5   A0A1S3WWX5   V5HZE3   A0A3B4UAN4   B7PYZ7   A0A3B4UAL4   A0A3Q0SFP3   A0A2K5PKP0   A0A3Q3B898   A0A3Q4HKR8   A0A2K6BD58   A0A2K6U1M2   A0A383YV83   A0A131Y4T6   A0A3B3SJC2   A0A2S2PZP7   A0A3B5JXM6   A0A341B0D8  

PDB

6QX9     E-value=1.51513e-07,     Score=130

KEGG

101740468    no KO assigned | (RefSeq) leucine-rich repeat-containing protein C10orf11-like

GO

GO:0016021   GO:0004930   GO:0030318   GO:0043473   GO:0005515   GO:0005215   GO:0006396   GO:0007264   GO:0031683   GO:0007165   GO:0001664   GO:0005525   GO:0016491   GO:0003824  

Length:

238

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00208

Exp number, first 60 AAs:

0.00177

Total prob of N-in:

0.06373

outside

1  -  238

 

 

Pi

210.085408

Theta

164.359839

Tajima's D

0.969816

CLR

0.263198

CSRT

0.652967351632418

Interpretation

Uncertain