SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05194  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA002456
Annotation
PREDICTED:_SH3_domain-containing_kinase-binding_protein_1_isoform_X2_[Bombyx_mori]
Location
Bomo_Chr9(+):10632586-10664668      View in EpiBrowser
Location in the cell
Nuclear   Reliability : 3.118
 

Sequence

CDS
ATGCCGGCAATGGAGACAAATCTATCACAAAAAGTGTCTTGCACCGTTAACTTCGCGTATGATGCATCAGAAGCGGACGAGCTGACGATCAGACCGGGGGACGTGATACGCGACGTTGAGAGATTGCCCGGGGGCTGGTGGCGAGGCGAGTTACGTGGAAACCGCGGCATGTTCCCGGACAACTTCGTTTCTCTTCTAAACGAACATGCTACTACGAGATCAACGGGCGTGCAAGGGCGGTGTCGGGCTCTGTACAGCTATCAACCAGTCAATCCGGATGAATTGGAACTCTGCGTCGGCGACGTGCTTGAAGTTCTAGGAGAGGTAGAGGAGGGCTGGTGGCAAGGTCGACGCCAGGGTCGCGTGGGTGTGTTTCCGTCTAACTTTGTTGTGATGCTCGACCCACCGCAGCCGGCACCCTTCGAACTCGCTCCAGCGCTCCCACCGAAGCCAGTAAAGGAGCAATGTCGGGTGTTGTTCACTTATACTGCCGTGAACGACGATGAGCTGAACCTCAACGAAGGCGACATCGTTACTGTTATATCGAAGGAAGCCCCCGATCGAGGCTGGTGGCGGGGAGAACTGCACGGTCGCGTCGGGCTCTTCCCCGATAACTTTGTACAGTTGTTGCCTGCCGCCACAGCAGAAGTTGAAGAGAAGAAACCCGAACGTCCATCAAAAGCCGCAACCAACTCGATTTATCCCATACTCAATAAATACACAGAAAAAACCGCCTCGGTCAAGGAGTTGACTACGTCTAAGATAAGTATGCACAAAGACAACCCTCTCAGCAAAGAGACTAGCACACATAGTACAGTCACGCACACAAGTAAGAATGAAACTGAGAAATTTATTCACAACGAAGCAGCTACAGACGGAAGTATCGACGGCCAGGTAAAGAAACCGCCGGTGCCGTTAAAGAAAAGTCCGACGCCCGTATCCGGGGTCGGAGGCTTGCTCAGCGGACTGAAGAATAAAATGCTATCATCTTCTGACAAAGAAAAATCGACGCCTGTTGTTGTGGATTCGGACCGACCGGACGGCGCTACGTCCAGCAAGCCAACACCCAACGCCAACGCAGCAACCACGACCAACGCCAACACGACCAACACCAACACGCCCAACACCAACACGCCCAACATCAACGCACCCAACAATAGTACGTTCGACAATATCGAACGTAACTCCATACTCAACGATCCTAGAGCGGGCAGAGTCAAAGCACCAAGACGACGGCCACCTAGTCAGGTCCTACGCGACGACACGCCGCAGCAAATAGGACTTAGCAACGGACACGAAGTACCGGCGAGCGAAAAGCCCCCGCCGGAGAAAGCGGAAGAGATAAAACCGCGCGCCCGCGAGTGGGAGAAGCACAAGGCTCCCTGGATGGAGGAGTTGAAGTTGAACCAGGCGAAGAAGACCAGCTTCGCTGCGGACGGCAAGGCGCGGTCCGTCTCCAGCTCGGCAGAGAGCAGCGCGCTGGCCAGCAGGGCGGGCGGCGGGAGCACCGACAGAATCCTGGAATGCGGTTTGGACGAGAAGAGATCAACGCATTCTATGGAAATGTCTAAGAGCACCTCATCAATCACCAGTCGAATGTGCGTTCTAGAAAGTTTCGAAGAGACGAAGGTACGTCACTCGTTGGATTCTAAAAAGGAAACGCCCGATAGGAGTACCCCTGATCCGGTGCCTGTCATTAAACCGGTCATGCATTCCCCCACCGCCGCAGGTCGAACATTTTTATCGATGGTTGATGACGTGAAGAAACCTCCCGCCCCCGCCCCGCCCGCCGCACCCACCGACAAGGCACCCAGCACCAAACACGACAAGCACGTTACAGATAAAATCGAAATGAATTCTACGAAGACATCCAGTGTGTTCGAGAAGTCTAGTACGGTCGAGAGAGTGGAACGGATCGAGGAGAGGTCGCCCGAGAAGCCGGTGGCCGCAGTCGGAGGTGACAGGACCAGCGCGTCCAGTACTCTCGAGCGGAGGCCGCAGCCCGGCAGGGGGGAGAAGGCGCCCCCGGCTGATGGAACCGACGCGCTCATTGCGCAGCTCAACTACAGGATATCGAACCTCGAGAAACTAATAGAAGTACAGAACAGCATGTTCAAGGCGTCTATTGAGGAGCTGAACGCGAAATTGAAACTTGAATCCGAGAAACGACAAGCTCTTCAGACCGAAATAGAGAAACTTGCACACTGCGTGACGCAAGTGTAG
Protein
MPAMETNLSQKVSCTVNFAYDASEADELTIRPGDVIRDVERLPGGWWRGELRGNRGMFPDNFVSLLNEHATTRSTGVQGRCRALYSYQPVNPDELELCVGDVLEVLGEVEEGWWQGRRQGRVGVFPSNFVVMLDPPQPAPFELAPALPPKPVKEQCRVLFTYTAVNDDELNLNEGDIVTVISKEAPDRGWWRGELHGRVGLFPDNFVQLLPAATAEVEEKKPERPSKAATNSIYPILNKYTEKTASVKELTTSKISMHKDNPLSKETSTHSTVTHTSKNETEKFIHNEAATDGSIDGQVKKPPVPLKKSPTPVSGVGGLLSGLKNKMLSSSDKEKSTPVVVDSDRPDGATSSKPTPNANAATTTNANTTNTNTPNTNTPNINAPNNSTFDNIERNSILNDPRAGRVKAPRRRPPSQVLRDDTPQQIGLSNGHEVPASEKPPPEKAEEIKPRAREWEKHKAPWMEELKLNQAKKTSFAADGKARSVSSSAESSALASRAGGGSTDRILECGLDEKRSTHSMEMSKSTSSITSRMCVLESFEETKVRHSLDSKKETPDRSTPDPVPVIKPVMHSPTAAGRTFLSMVDDVKKPPAPAPPAAPTDKAPSTKHDKHVTDKIEMNSTKTSSVFEKSSTVERVERIEERSPEKPVAAVGGDRTSASSTLERRPQPGRGEKAPPADGTDALIAQLNYRISNLEKLIEVQNSMFKASIEELNAKLKLESEKRQALQTEIEKLAHCVTQV

Summary

Uniprot
A0A3S2LD97   A0A194RNG3   A0A212FDV9   A0A194PMT5  
Pubmed
26354079    22118469   
EMBL
RSAL01000037    RVE51197.1    KQ459984    KPJ18954.1    AGBW02008996    OWR51931.1    + More
KQ459597    KPI94741.1   
Proteomes
UP000283053    UP000053240    UP000007151    UP000053268   
Pfam
PF00018   SH3_1        + More
PF14604   SH3_9
Interpro
IPR028506   Sorbin_SH3        + More
IPR001452   SH3_domain       
IPR036028   SH3-like_dom_sf       
IPR028445   CD2AP       
SUPFAM
SSF50044   SSF50044       
ProteinModelPortal
A0A3S2LD97   A0A194RNG3   A0A212FDV9   A0A194PMT5  
PDB
2K6D     E-value=2.44887e-17,     Score=220

Ontologies

KEGG
101740336    no KO assigned | (RefSeq) CD2-associated protein
GO
GO:0005515   GO:0005215   GO:0006396   GO:0007264   GO:0031683   GO:0007165   GO:0001664   GO:0005525   GO:0016491   GO:0003824  
PANTHER
PTHR14167:SF6   PTHR14167:SF23  

Topology

Length:
740
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0002
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00010
outside
1  -  740
 
 

Population Genetic Test Statistics

Pi
248.395962
Theta
165.4892
Tajima's D
1.632752
CLR
0.196015
CSRT
0.813559322033898
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
26280517 SPDINQIGTQK 100.00 0.049
25044914 SPEIIPIIR 100.00 0.049
28556443 ILAHESFAQLR 100.00 0.049
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