Gene

KWMTBOMO05193

Pre Gene Modal

BGIBMGA002455

Annotation

putative_mitochondrial_NADH-ubiquinone_oxidoreductase_AGGG_subunit_[Operophtera_brumata]

Location

Bomo_Chr9(+):10629326-10631454      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 2.982

CDS

ATGTTGACAAGAACTTTGCTAACGAGAGCTATTCTGCTCCGTAGGCTGCAAAATGCTGGCGACAGCTTGAAACAAACCAAACGAAATGCAGGACATGGAGTTTGGACGTACCGTGTACCGCCACCAATGCCTTCCAAAAAATCGATTCGGTTAGCTCAAGGGCTTGGTGGATTGTGCTGGTGGTGGATTCTGTATCACATTGCAACTGAACCTGAGCATATAACTGGTGAGTGGCCTTATATTGATCCCAGTACATGGACTGATGAAGAGCTTGGAATTCCTCCTGATTCAGCAGGATGCATAAAGCATTAA

Protein

MLTRTLLTRAILLRRLQNAGDSLKQTKRNAGHGVWTYRVPPPMPSKKSIRLAQGLGGLCWWWILYHIATEPEHITGEWPYIDPSTWTDEELGIPPDSAGCIKH

Uniprot

H9IYX0   A0A194RMA1   A0A0L7L496   A0A1E1WBI0   I4DJQ3   A0A212FDW8   + More
A0A2H1VQ23   A0A2J7Q2X6   D6X3U6   A0A1Q3EV30   B8RIY4   A0A2P8Y7A5   A0A293LT28   A0A182FPB1   B0WQH5   A0A224Y2Y0   A0A0L8I4Y1   A0A182PI69   A0A182UFS6   A0A182XAM2   Q7QCH8   A0A2M3Z8A2   A0A2M3ZIC3   A0A2M4AH38   A0A2M4AHE1   A0A1I8MBV3   T1DKA3   A0A2M4C451   A0A2M4C483   Q6PBN0   W5JMQ7   A0A2R5L6P4   A0A158NAB2   A0A195BJE2   A0A1B6MDD2   B5DSA8   A0A195FRE4   V5H955   A0A131Y7T9   A0A023EEP4   A0A1J1J1G5   A0A023G0U5   A0A088AII4   A0A2I0TSB5   A0A1E1X0T1   A0A0K8R585   A0A2L2XWJ8   A0A0V0G6T8   A0A1E1XUR5   A0A023FP84   A0A023FR53   B3MTK9   A0A1B0DC09   A0A0Q9WMH5   A0A1B0GI80   A0A0N8D6J7   R4WSA4   A0A0Q9WYP7   G5B572   A0A0P6K1A8  

Pubmed

19121390    26354079    26227816    22651552    22118469    18362917    + More
19820115    29403074    12364791    14747013    17210077    25315136    23594743    20920257    23761445    21347285    15632085    17994087    25765539    24945155    26483478    28503490    26561354    29209593    23691247    21993625   

EMBL

BABH01010684    KQ459984    KPJ18953.1    JTDY01003008    KOB70318.1    GDQN01006755    + More
JAT84299.1    AK401521    KQ459597    BAM18143.1    KPI94740.1    AGBW02008996    OWR51932.1    ODYU01003479    SOQ42334.1    NEVH01019075    PNF22928.1    KQ971326    EEZ97472.1    GFDL01015884    JAV19161.1    EZ000408    ACJ64282.1    PYGN01000839    PSN40136.1    GFWV01006208    MAA30938.1    DS232040    EDS32848.1    GFTR01001565    JAW14861.1    KQ416544    KOF96537.1    AAAB01008859    EAA08014.5    GGFM01003969    MBW24720.1    GGFM01007437    MBW28188.1    GGFK01006711    MBW40032.1    GGFK01006707    MBW40028.1    GAMD01001046    JAB00545.1    GGFJ01010975    MBW60116.1    GGFJ01011005    MBW60146.1    BX537168    BC059649    AAH59649.1    ADMH02000945    ETN64598.1    GGLE01001004    MBY05130.1    ADTU01010125    KQ976455    KYM85211.1    GEBQ01006034    JAT33943.1    CH475481    EDY71456.1    KQ981305    KYN43033.1    GANP01004668    JAB79800.1    GEFM01000909    JAP74887.1    JXUM01066513    GAPW01006454    GAPW01006453    KQ562402    JAC07144.1    KXJ75994.1    CVRI01000066    CRL06285.1    GBBL01000835    JAC26485.1    KZ507511    PKU36696.1    GFAC01006305    JAT92883.1    GADI01007488    JAA66320.1    IAAA01007309    LAA00338.1    GECL01002708    JAP03416.1    GFAA01000743    JAU02692.1    GBBK01001383    JAC23099.1    GBBK01001382    JAC23100.1    CH902623    EDV30140.1    AJVK01030480    CH940650    KRF82705.1    AJWK01013569    GDIQ01267193    GDIP01063871    JAJ84531.1    JAM39844.1    AK417577    BAN20792.1    CH933806    KRG00505.1    JH168530    EHB04433.1    GEBF01007434    JAN96198.1   

Proteomes

UP000005204    UP000053240    UP000037510    UP000053268    UP000007151    UP000235965    + More
UP000007266    UP000245037    UP000069272    UP000002320    UP000053454    UP000075885    UP000075902    UP000076407    UP000007062    UP000095301    UP000000437    UP000000673    UP000005205    UP000078540    UP000001819    UP000078541    UP000069940    UP000249989    UP000183832    UP000005203    UP000007801    UP000092462    UP000008792    UP000092461    UP000009192    UP000006813   

PRIDE

H9IYX0   

Pfam

PF14813   NADH_B2        + More
PF06645   SPC12

Interpro

IPR026627   NDUFB2        + More
IPR009542   SPC12       

ProteinModelPortal

H9IYX0   A0A194RMA1   A0A0L7L496   A0A1E1WBI0   I4DJQ3   A0A212FDW8   + More
A0A2H1VQ23   A0A2J7Q2X6   D6X3U6   A0A1Q3EV30   B8RIY4   A0A2P8Y7A5   A0A293LT28   A0A182FPB1   B0WQH5   A0A224Y2Y0   A0A0L8I4Y1   A0A182PI69   A0A182UFS6   A0A182XAM2   Q7QCH8   A0A2M3Z8A2   A0A2M3ZIC3   A0A2M4AH38   A0A2M4AHE1   A0A1I8MBV3   T1DKA3   A0A2M4C451   A0A2M4C483   Q6PBN0   W5JMQ7   A0A2R5L6P4   A0A158NAB2   A0A195BJE2   A0A1B6MDD2   B5DSA8   A0A195FRE4   V5H955   A0A131Y7T9   A0A023EEP4   A0A1J1J1G5   A0A023G0U5   A0A088AII4   A0A2I0TSB5   A0A1E1X0T1   A0A0K8R585   A0A2L2XWJ8   A0A0V0G6T8   A0A1E1XUR5   A0A023FP84   A0A023FR53   B3MTK9   A0A1B0DC09   A0A0Q9WMH5   A0A1B0GI80   A0A0N8D6J7   R4WSA4   A0A0Q9WYP7   G5B572   A0A0P6K1A8  

PDB

6G72     E-value=1.42807e-07,     Score=126

KEGG

101740204    K03958 NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 2 | (RefSeq) NADH dehydrogenase [ub

PATHWAY

00190    Oxidative phosphorylation - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0005747   GO:0016021   GO:0005787   GO:0008233   GO:0006465   GO:0032981  

PANTHER

PTHR15223  

Length:

103

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.52059

Exp number, first 60 AAs:

0.30672

Total prob of N-in:

0.33682

outside

1  -  103

 

 

Pi

217.573541

Theta

170.601254

Tajima's D

0.856776

CLR

0

CSRT

0.621968901554922

Interpretation

Uncertain