Gene

KWMTBOMO05190

Pre Gene Modal

BGIBMGA002445

Annotation

PREDICTED:_tRNA-specific_adenosine_deaminase_1-like_[Plutella_xylostella]

Location

Bomo_Chr9(-):10598902-10600395      View in EpiBrowser

Full name

tRNA-specific adenosine deaminase 1      

Alternative Name

dADAT1
tRNA-specific adenosine-37 deaminase

Location in the cell

Nuclear   Reliability : 3.832

CDS

ATGCCAGATAACCTATCAAGTGTATGTGTCGATAACATAGTAGAGAAATGTTTGAAAACATACGAACAACTACCCAAAAAAGGAAAACCTGCCGATGACGAATGGACGGTGCTATCTTGCATTGTAAAATATGAAACTGAACATGATACGATCGAAGTATTATCCTTAGGAACTGGGTCTAAATGTATTGGCGCTACAAAAATGTCGCCACTCGGAGACTTGCTCAATGACAGTCACGCTGAAGTGTTCGCTCGACGCGGGTTTATACATTATCTATTCCAAAATATCGAAAAGGCTACCAACAATCTTGATTCTATATTCATTAAAACGGATAGCAAGCTAAAATTAAAAGACAGCATAGAATTTATATTTTATTCTTCACAATTACCTTGTGGTGACGCATCTATTATACCTAAGAATGGTGAAGAGCAAGAGGACCACTTTGGTGATCTAATCAAGGTTAAAAGAAAGGCAGATGAGAGCAACTGTGTGCGTGACACTAAAAGACTAAAATTAAGTGATATTCATCGAACCGGTGCAAAATGCCTTTCAAATGCAGAACAGGACCTTAAAATTCCTGGAAAAGATTATCATGTTTTAGGTCAGGTTAGAACTAAGCCTGGAAGAGGTGATAGAACACTATCAGTGTCTTGTAGTGATAAAATAGCTAGATATAAAATCAGAAGGAAAGTATAG

Protein

MPDNLSSVCVDNIVEKCLKTYEQLPKKGKPADDEWTVLSCIVKYETEHDTIEVLSLGTGSKCIGATKMSPLGDLLNDSHAEVFARRGFIHYLFQNIEKATNNLDSIFIKTDSKLKLKDSIEFIFYSSQLPCGDASIIPKNGEEQEDHFGDLIKVKRKADESNCVRDTKRLKLSDIHRTGAKCLSNAEQDLKIPGKDYHVLGQVRTKPGRGDRTLSVSCSDKIARYKIRRKV

Description

Specifically deaminates adenosine-37 to inosine in tRNA-Ala.

Catalytic Activity

adenosine(37) in tRNA(Ala) + H(+) + H2O = inosine(37) in tRNA(Ala) + NH4(+)

Cofactor

1D-myo-inositol hexakisphosphate

Similarity

Belongs to the ADAT1 family.

Keywords

Complete proteome   Hydrolase   Metal-binding   Reference proteome   tRNA processing   Zinc  

Feature

chain  tRNA-specific adenosine deaminase 1

Uniprot

H9IYW0   A0A3S2TNV0   A0A2H1VND2   A0A194RNF8   A0A2H1VL42   A0A0L7KTY9   + More
A0A194PMS8   A0A0P6F8I2   A0A0P5H778   A0A0P4YKN3   A0A0P4Y4S7   A0A0P4XKQ2   A0A162PL27   A0A0P5PZK5   A0A0P6JJ14   E9GMF4   E0VK95   A0A3Q4GNB2   A0A146LV80   A0A139WKA0   V5GVN5   A0A1A8LYB7   U4UNI0   N6UDH2   A0A3P9CEE3   A0A3Q3D0V6   A0A2H8TWE4   A0A3Q3JCJ9   J3JVX3   A0A1A8F051   A0A0P5KPH6   A0A1B6K858   A0A3P8NUY1   A0A2S2NEH6   A0A1A8PKI9   G3NBY6   A0A1B6LNE2   A0A3B4TFS5   A0A1A8V942   A0A1A7ZQI5   A0A1A8IW17   J9LSD3   A0A3P8X4I3   A0A1A7XDU9   A0A3Q1CHG3   A0A3B4F681   A0A1B6H2C4   A0A3P8SCZ3   A0A3B4WLI3   A0A3Q3LMF6   A0A3B4B9H1   H2MJY2   A0A3Q3LMH3   K7J168   A0A3P9IUJ9   A0A0T6AV05   A0A3P9KVI8   A0A0C9R2C9   A0A3Q3GTJ7   A0A2R5LK74   A0A3Q1HM40   A0A131XZ26   A0A232FJ58   A0A224Z8T9   A0A1I8PCS3   A0A3P9N4V8   A0A2L2YHZ0   A0A3P9N4U8   F4X2X4   A0A1I8N125   A0A0P5QLZ8   A0A0P6D0B2   A0A0P5Z7D8   A0A3P9A0H3   A0A151X5H3   E9IK04   E2AUE8   B4P3Q0   A0A154PDH2   A0A182MM46   E2B4R0   B4HX96   B4Q560   A0A3L8DQF2   A0A293M997   A0A147BPZ1   A0A0L8GUP4   A0A195FSB2   N0BSY1   M9PDF5   Q9V3R6   A0A0L0CA60   A0A088ADX9   A0A0L7RG36   A0A3Q2DTE6   A0A182WH76   A0A3B1KET4   A0A1A9WCD8   A0A0P4W7T8  

EC Number

3.5.4.34

Pubmed

19121390    26354079    26227816    21292972    20566863    25186727    + More
26823975    18362917    19820115    23537049    22516182    24487278    25463417    17554307    20075255    28648823    28797301    26561354    21719571    25315136    25069045    21282665    20798317    17994087    17550304    22936249    30249741    29652888    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    10629039    26108605    25329095   

EMBL

BABH01010679    RSAL01000038    RVE51145.1    ODYU01003479    SOQ42330.1    KQ459984    + More
KPJ18949.1    ODYU01003150    SOQ41538.1    JTDY01005703    KOB66722.1    KQ459597    KPI94736.1    GDIQ01053975    JAN40762.1    GDIQ01230254    JAK21471.1    GDIP01226029    JAI97372.1    GDIP01233731    JAI89670.1    GDIP01241240    JAI82161.1    LRGB01000494    KZS18938.1    GDIQ01121896    JAL29830.1    GDIQ01006326    JAN88411.1    GL732552    EFX79359.1    DS235239    EEB13801.1    GDHC01008032    JAQ10597.1    KQ971328    KYB28362.1    GALX01002709    JAB65757.1    HAEF01010115    SBR49780.1    KB632292    ERL91575.1    APGK01026978    KB740648    ENN79750.1    GFXV01006762    MBW18567.1    BT127391    AEE62353.1    HAEB01005960    SBQ52487.1    GDIQ01186566    JAK65159.1    GECU01000112    JAT07595.1    GGMR01002928    MBY15547.1    HAEH01007302    SBR81527.1    GEBQ01014725    JAT25252.1    HAEJ01015884    SBS56341.1    HADY01006071    SBP44556.1    HAED01015087    SBR01532.1    ABLF02040844    HADW01014768    SBP16168.1    GECZ01000999    JAS68770.1    LJIG01022802    KRT78638.1    GBYB01002149    GBYB01002150    JAG71916.1    JAG71917.1    GGLE01005753    MBY09879.1    GEFM01003537    JAP72259.1    NNAY01000154    OXU30498.1    GFPF01012885    MAA24031.1    IAAA01029427    LAA07761.1    GL888600    EGI59195.1    GDIQ01133036    JAL18690.1    GDIQ01087094    JAN07643.1    GDIP01047857    JAM55858.1    KQ982498    KYQ55651.1    GL763921    EFZ19089.1    GL442815    EFN63005.1    CM000157    EDW88351.1    KQ434878    KZC09857.1    AXCM01017536    GL445584    EFN89341.1    CH480818    EDW51676.1    CM000361    CM002910    EDX04966.1    KMY90159.1    QOIP01000005    RLU22670.1    GFWV01012020    MAA36749.1    GEGO01002576    JAR92828.1    KQ420350    KOF80554.1    KQ981280    KYN43353.1    BT150087    AGK63853.1    AE014134    AGB92985.1    AF192530    JRES01000685    KNC29142.1    KQ414596    KOC69912.1    GDRN01084205    JAI61534.1   

Proteomes

UP000005204    UP000283053    UP000053240    UP000037510    UP000053268    UP000076858    + More
UP000000305    UP000009046    UP000261580    UP000007266    UP000030742    UP000019118    UP000265160    UP000264840    UP000261600    UP000265100    UP000007635    UP000261420    UP000007819    UP000265120    UP000257160    UP000261460    UP000265080    UP000261360    UP000261660    UP000261520    UP000001038    UP000002358    UP000265200    UP000265180    UP000265040    UP000215335    UP000095300    UP000242638    UP000007755    UP000095301    UP000265140    UP000075809    UP000000311    UP000002282    UP000076502    UP000075883    UP000008237    UP000001292    UP000000304    UP000279307    UP000053454    UP000078541    UP000000803    UP000037069    UP000005203    UP000053825    UP000265020    UP000075920    UP000018467    UP000091820   

PRIDE

H9IYW0    Q9V3R6   

Pfam

PF02137   A_deamin        + More
PF00248   Aldo_ket_red

Interpro

IPR002466   A_deamin        + More
IPR023210   NADP_OxRdtase_dom       
IPR036812   NADP_OxRdtase_dom_sf       
IPR018170   Aldo/ket_reductase_CS       
IPR020471   Aldo/keto_reductase       

SUPFAM

SSF51430   SSF51430       

Gene 3D

3.20.20.100    

CDD

cd06660  Aldo_ket_red

ProteinModelPortal

H9IYW0   A0A3S2TNV0   A0A2H1VND2   A0A194RNF8   A0A2H1VL42   A0A0L7KTY9   + More
A0A194PMS8   A0A0P6F8I2   A0A0P5H778   A0A0P4YKN3   A0A0P4Y4S7   A0A0P4XKQ2   A0A162PL27   A0A0P5PZK5   A0A0P6JJ14   E9GMF4   E0VK95   A0A3Q4GNB2   A0A146LV80   A0A139WKA0   V5GVN5   A0A1A8LYB7   U4UNI0   N6UDH2   A0A3P9CEE3   A0A3Q3D0V6   A0A2H8TWE4   A0A3Q3JCJ9   J3JVX3   A0A1A8F051   A0A0P5KPH6   A0A1B6K858   A0A3P8NUY1   A0A2S2NEH6   A0A1A8PKI9   G3NBY6   A0A1B6LNE2   A0A3B4TFS5   A0A1A8V942   A0A1A7ZQI5   A0A1A8IW17   J9LSD3   A0A3P8X4I3   A0A1A7XDU9   A0A3Q1CHG3   A0A3B4F681   A0A1B6H2C4   A0A3P8SCZ3   A0A3B4WLI3   A0A3Q3LMF6   A0A3B4B9H1   H2MJY2   A0A3Q3LMH3   K7J168   A0A3P9IUJ9   A0A0T6AV05   A0A3P9KVI8   A0A0C9R2C9   A0A3Q3GTJ7   A0A2R5LK74   A0A3Q1HM40   A0A131XZ26   A0A232FJ58   A0A224Z8T9   A0A1I8PCS3   A0A3P9N4V8   A0A2L2YHZ0   A0A3P9N4U8   F4X2X4   A0A1I8N125   A0A0P5QLZ8   A0A0P6D0B2   A0A0P5Z7D8   A0A3P9A0H3   A0A151X5H3   E9IK04   E2AUE8   B4P3Q0   A0A154PDH2   A0A182MM46   E2B4R0   B4HX96   B4Q560   A0A3L8DQF2   A0A293M997   A0A147BPZ1   A0A0L8GUP4   A0A195FSB2   N0BSY1   M9PDF5   Q9V3R6   A0A0L0CA60   A0A088ADX9   A0A0L7RG36   A0A3Q2DTE6   A0A182WH76   A0A3B1KET4   A0A1A9WCD8   A0A0P4W7T8  

PDB

6D06     E-value=9.675e-16,     Score=201

KEGG

101739192    K15440 tRNA-specific adenosine deaminase 1 [EC:3.5.4.34] | (RefSeq) tRNA-specific adenosine deaminas

GO

GO:0003723   GO:0006396   GO:0004000   GO:0016491   GO:0016021   GO:0006400   GO:0008251   GO:0046872   GO:0008033   GO:0007264   GO:0031683   GO:0007165   GO:0001664   GO:0005525   GO:0003824  

PANTHER

PTHR43827  

Length:

231

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00013

Exp number, first 60 AAs:

7e-05

Total prob of N-in:

0.10580

outside

1  -  231

 

 

Pi

185.993151

Theta

148.542177

Tajima's D

0.805195

CLR

0

CSRT

0.607469626518674

Interpretation

Uncertain