SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05185
Pre Gene Modal
BGIBMGA002452
Annotation
PREDICTED:_uncharacterized_protein_LOC106134731_[Amyelois_transitella]
Location in the cell
Nuclear   Reliability : 4.314
 

Sequence

CDS
ATGTGGAAATTACTGCAGGAGTCACCAACAGCCTATGCTATTCAATTCAACAAAGAAAATGGATATGAAATCTTCATTACAGATTTTATCTATTTATGGCATGTTTATTTCACTGAAAGAACTTTTCTCACGCAACTAAAGGAAAGCAATGATGGAATAGAATTCGAAAATGATTCGCAGCTGTTGCAGGATGGAATTAAACTATTGGTACAACCTGAGAATCTAAAAAAAGTTAATGTTTTTGAAGAAAATGAAAAGAGGAATTTATCTATAACTTTAGTAATGTCTTGTGGATTTCCATTTAAATTAAAATGTAGACTTTCCAGAGTATCAGATGAAGGGATGTTCCAGAAAATTACTCAAAACCTACTGAAGATAATCAATGATCTGTGGACGAGTCAAACAATATTAAGGAACACCTTGAACAAGAAAGATAAAGAGCTGACTGCATATAAAACAAAGTTTGGTGAAATTCAACACAAACACAAAAAAACTGAACCATTCAATGATGAACTTCACATGAACACTCACAACATGTATGAAACCCATTTCGGAGAATCTCCAATACCCCATAGTATTTTACAGAAGACAATAATATTACCCAAACAACCTATAAAAACTGAATGTTCCAGCGAGAGTGAGTTACAAACGATCCAAATTAAACAAGAAATTATGACACCTACTACGGAGGATCAAAACCATTTTGCAGTCAACGATTCTGTCAAACGCGAAACTACAAAAGTCGATCCGCCGGTAAATGGACGCGTTTGCGTTAAAAAAAAAAGAAAGGGTCTCATATTTTAG
Protein
MWKLLQESPTAYAIQFNKENGYEIFITDFIYLWHVYFTERTFLTQLKESNDGIEFENDSQLLQDGIKLLVQPENLKKVNVFEENEKRNLSITLVMSCGFPFKLKCRLSRVSDEGMFQKITQNLLKIINDLWTSQTILRNTLNKKDKELTAYKTKFGEIQHKHKKTEPFNDELHMNTHNMYETHFGESPIPHSILQKTIILPKQPIKTECSSESELQTIQIKQEIMTPTTEDQNHFAVNDSVKRETTKVDPPVNGRVCVKKKRKGLIF

Summary

Pfam
PF09302   XLF
Interpro
IPR015381   XLF_fam       

Ontologies

Topology

Length:
267
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
2.52267
Exp number, first 60 AAs:
2.52112
Total prob of N-in:
0.14458
outside
1  -  267
 
 

Population Genetic Test Statistics

Pi
216.93058
Theta
138.299972
Tajima's D
2.294755
CLR
0.416633
CSRT
0.925403729813509
Interpretation
Uncertain
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