SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05172
Pre Gene Modal
BGIBMGA012482
Annotation
PREDICTED:_uncharacterized_protein_LOC101746698_isoform_X1_[Bombyx_mori]
Location
Bomo_Chr9(+):9751078-9769919      View in EpiBrowser
Location in the cell
Nuclear   Reliability : 3.74
 

Sequence

CDS
ATGCAGACAGCACGCGAGTCGAGCCGACCAAAGCGGTGCAACAAGAGAAGGCATTCAAGAAAGAAATCCCTGTCTCCATCAGATCTGAAGTGTGCTCGCGGTGACACGAAAACGGATACAAAATTGAACGGCAAACGTTCGCTATCAGAGGGGTCGGTGAAAGTGAAGCATAGGAAAAGCAACATACGTCGAACTTTGACCCATCCGATCACGTGTTCGGATGATATTCACGATGTTACCATGATCGGCGCGTTCAATAAACACGTCAAAGTGGAACTGCCACCAGAGAGCGACGAATCCCACCTTCCTCCGACCAGCAGCGACAGGGACACGGAGGACGACAGTCGAATCCAGAGACCCGTTCCGCAGAGGCCGAGATGGGATTCAGGAAGTGAAATGGACTCTTTGGTATCTACTGTCGTCAGGAGAGCATCAGCCCGAAGACGCAGAACGCCGGCAAACCTGGAGTGGGGCGTCAACAGTGAAGCGGGCGAAGTGAGTGAGCCAGAGGCCGGTCGTATGCGTCCTGAAGACTATAGGCTCGTGTTTCTCAGCTCTGATTCGTCGTGTCGCGAAGACACGGAAGATTCGTCGTCGACGGCATCTTCCGCAGCGCCGCCCGCGCCCGACGATTGCGATTGGGACTATTTCGAACCGGGCGCGGCGGCGGCTCAATCCACTCCACCTCCACCGAAGCACGCTCCTCAAGTCTGTCCGAGGCAGTGCTCCTGTGGCGCCGAGCCCCGCATAGTTGCCGTCCCCGTGCCTGTTCCTGTGCCAGTACCCGCTGCACTCTGGCCCGCATTACTAGCGTTTCCAACACAGGCTCCTCCCACGCCACATTGGAGCACATACCCCGGCTTCCCGCCTCTAGATGCCGCTGCGCTTGCGCGTCTCACCACAGCAGCTGCGGTCGCTGTCACCGCCGCCGCATCCGCCTCCGCCTCCGCCACTGCTACTGCCTCCGCTTCTCTTCAAAATAATAAAATCGAAATGACCACCGTTGAAAGAACCGATAAAGCAATACAATCTGAAACGTCACAATTATCAGAGGCTCTCGATAGCGATAACGTCGATAATGCTATTGAACTGCGAATCGAGAATGAAAATTCAGTCGGTATTAAGGTAATCGCGGAAGAAGACCGCTTGTCCGTTGTGTCGGAACAAGGCGAAAGTATGCCTGAACACCTGGAAGCGGAGAAAGCTTTTCCGTCATCGAATGATTCCGGAGATTCTAGTGATTCAGACGCCGGTGTAGCTCGACGCAGCTATGACTTGACCAGTGGAGCACCCGAAGAACCGGCGACAACAGATGAGGATTCAGACGATTCGGGAGGTGGAGGAGGCCGGTTTTCGCGAGTGTTTGTTGTGAACCCAGCAGACTCTTCCTCAGATCTAGAAGATAACGCAGATAGTAGTGGAATTGACTGCGACGACTCGTATGACAAGAAATCCGACAGCTTGGAAATTATTGCCGAGGAAATGATTATGCAAAATGAAATTATCAACTTACAGCCAAACGACAACCGACAACAAGGCAATGAAATTGTTCTGCTGGATTCTGTTGATTTTAGCGAAGAATACCCCGTGATCATATATGAGAATGTCTATGAATCAGATGATAGCAACAAGGCGAACAAGTCAAATCTTGCAAAATTTTGTGACGAAAATATGCTTCGGAGCGAGACATGTGAAGAATTTAATAGTTTTAATGTGGCATGTAGTTCAAGTAGTGATAATGTAGATAATGTCAATGACGTAGATAATAATATTAATCGATACCAGAATAGTATATCAAATGATATTGAGTGCGACTCCTTGTCAAATAGTTTTTACTCCGATACGAGTGACATGAAAGTGAAGGTTAGCGTCGAATTACTTGATGATAGTTATAATAACAAAGAACTAGGGACCACCGAAATTCCACCGGCACCTATGTGTAACTTAGTACCTTCTCCAAAAACTGACCACGAAGAATCATGTTCGACCGCAGAAAAAATAGACCTGTTCAAAGGTATCGAACGCACTCTGAGTGAACTGTTGAAGAAAGAATTAATGCAGGAACAAGAAGCGGAGAAAATACACGCTTGCAGGCCGGTTTGTTCGGAAACGGTGGGGGGCGCGTGCACACCTGCCGCGACAACAGTTTGCCGCTCGCGTACGCCTTGTGCGGACGGTTCCGCGCGCTTCACTAGCCGCGTTATGATAACGCACGATCGCGTCTCCGTTGTCACGTCAGACACGACGCAGCTCATGCGAGATATAACAGTGCAACACACCAACTCTCAGAACGAGACAGAACCTGACACAGGGGCACAGCAAAACGAAAATGACGAACGAAATTCGGACGACGAAACGCCACAGCCTTCGGGTGGAGTGACTGTCGTTAGTAATGCCGACACTCTCTCGGCTGTCGTGTGCCTCGAAGAGGGGCTCGCTGACGACGACTCGTGGGTCGAGGACGTCAGCCATGACGATGACGAGGCCACCACGACTTCTGACACCGATTCAGGCGACGAGGCCTCCCTGCCCTCGCGAGGAGATGATTTTTCGTATTGTAGGCGTTCCTTAGATTTTACGTTGCATACCATAGTTGAAGAAAGTTGTGAAGAAAGCGAAACTGAGCACACCACAAAGAAACCGCGACCTTTGTCCGCAACTGAGCTAGAAAAATATTTTTTTTTCGGCCTAGGAGACGGACGAATTGTTCGCGAGGATGAAGAAGCAGTGTCAGAAACGTCCAGTGTGTGTAGTGAAGGAGGTGAATCGATTGTTGACAGTGAGCAACCTAAACGAAACAGTGACAGTGATGACTTGGTGTCATCGCGCTTGGAAAAATATTTCTTATCTGGATTTATGGGTTTCAATCAAGAGAGACGAGACTCGGACGGTTCCGGGAGTGTAGGAAGCGACAGTGAAGGCAGACAGAGTCCGGAGCAAAGGAGGAAACGCCTTGTTCGGGCTCGCGGTACTCCTCGTTCGCATTCTTCTTCCCTGGATAACTTATTAACTGGCGAAGAACAGACACAAGATGGCCAAGAAGTATCAGATGCGTCCAGCACAGAAACTGAAGACAGACATGACTCATCTGATCGATTAGACATGCAAGGTGAATGCAAGAGAAAAAAGCAAGCGAAAAAAACGCGCGGTTCCCCAGCTGACGAACGCCGACAGTCCGCAGAGTTCACTGAAGAAACACGTGATGATACTCGATCCGTTTCAGAGGGTGAAGACAGTAATTCAGTACCACGACCGGAATTCCCACCGCTCGGTTCCGAACTATCCGAATCTAAAAAACAGGCGAGCAGAGACAGCGGCTTTGTTGGCAGCTGTGACGATCTTCTACGAAACAGCGACAACAGTTCGGATTTCAGATCTCACGAACTTAAAACGGAATTGGAAGAAATCGTAGAAGAAATTAGGCCGGACTTAGATGAGCGGTTAGAAAGCTCCTCGACATCACGTCCACCGCAAAGCCAACTCACGAGAAAAGATAGTTTTAATAATTGGTCATCGGATGAGGAGACAAATCTCATGATGACAAAGATGCGGCAATTCTTCAAGCAAATGATACATACAGGGAACGTGCGCACGTCCACTCCGGCTTCAACAAATTCAGAGAGTTCGCGTCCGCCGAAACCGCCACAACTATTGTATTTTGAAAGCGAATTAACGAGACTAATGAAAACAGTTCCGGGTATACGCGACGAAGAAGTGCGCGAAATCGTCGAATATTTATCAAGCGAAGACACGTGGAGTGACTCATACGATTCCTCAGACTATGCGGGCTCCGATATGGAGGGCACGGCGGCCAATAGGACAGAACTCAGGAAACAAATATCCGAGAGCTGTCGAGAGATAATCGACGAATTTGACAGAGGTAACGGCGACGCGAGGTCACTGGAGCGCGATGCGGCCGGTGCGTATCGAAAACTGGCGGCAACTTTGGGACGCGCCGGAGAAGGCTCGCCTCCCTTATTTGGGAAAGTCATGAGACATATCGGAGGGAGACTAGTGGCGTTGATGCATGAAGTATCAGGTGGTGCATCGCCGAGCACAGATGACGACAGCGCGTCTGAACCGGGAGCGTTAGCGCGGAGTAAATCTCACGATATATTGGAGGCGACAGCAAGTCGGGGTAGTGTGGCTAGTGATTGTGAACGGTTTTCGTGGCGTGGTAGTTTCGAATCGGCGCTTCTGGCGGCCGACTCGCGCGGCACTCTGGGCGGTGCGGGGTGTGAAGCTCGGAGATCACCCGCAGCCTTGGATCTGGCTGCGCAGAAGTCGCACTCTCGCAGTTGTGGAGCTATTAGTGGCAGTGAAGACAGACTTTGGCGTGGACGGAGAAGAGCGTCGGCTCCTGATGCGGAGGTAAGACAGTAA
Protein
MQTARESSRPKRCNKRRHSRKKSLSPSDLKCARGDTKTDTKLNGKRSLSEGSVKVKHRKSNIRRTLTHPITCSDDIHDVTMIGAFNKHVKVELPPESDESHLPPTSSDRDTEDDSRIQRPVPQRPRWDSGSEMDSLVSTVVRRASARRRRTPANLEWGVNSEAGEVSEPEAGRMRPEDYRLVFLSSDSSCREDTEDSSSTASSAAPPAPDDCDWDYFEPGAAAAQSTPPPPKHAPQVCPRQCSCGAEPRIVAVPVPVPVPVPAALWPALLAFPTQAPPTPHWSTYPGFPPLDAAALARLTTAAAVAVTAAASASASATATASASLQNNKIEMTTVERTDKAIQSETSQLSEALDSDNVDNAIELRIENENSVGIKVIAEEDRLSVVSEQGESMPEHLEAEKAFPSSNDSGDSSDSDAGVARRSYDLTSGAPEEPATTDEDSDDSGGGGGRFSRVFVVNPADSSSDLEDNADSSGIDCDDSYDKKSDSLEIIAEEMIMQNEIINLQPNDNRQQGNEIVLLDSVDFSEEYPVIIYENVYESDDSNKANKSNLAKFCDENMLRSETCEEFNSFNVACSSSSDNVDNVNDVDNNINRYQNSISNDIECDSLSNSFYSDTSDMKVKVSVELLDDSYNNKELGTTEIPPAPMCNLVPSPKTDHEESCSTAEKIDLFKGIERTLSELLKKELMQEQEAEKIHACRPVCSETVGGACTPAATTVCRSRTPCADGSARFTSRVMITHDRVSVVTSDTTQLMRDITVQHTNSQNETEPDTGAQQNENDERNSDDETPQPSGGVTVVSNADTLSAVVCLEEGLADDDSWVEDVSHDDDEATTTSDTDSGDEASLPSRGDDFSYCRRSLDFTLHTIVEESCEESETEHTTKKPRPLSATELEKYFFFGLGDGRIVREDEEAVSETSSVCSEGGESIVDSEQPKRNSDSDDLVSSRLEKYFLSGFMGFNQERRDSDGSGSVGSDSEGRQSPEQRRKRLVRARGTPRSHSSSLDNLLTGEEQTQDGQEVSDASSTETEDRHDSSDRLDMQGECKRKKQAKKTRGSPADERRQSAEFTEETRDDTRSVSEGEDSNSVPRPEFPPLGSELSESKKQASRDSGFVGSCDDLLRNSDNSSDFRSHELKTELEEIVEEIRPDLDERLESSSTSRPPQSQLTRKDSFNNWSSDEETNLMMTKMRQFFKQMIHTGNVRTSTPASTNSESSRPPKPPQLLYFESELTRLMKTVPGIRDEEVREIVEYLSSEDTWSDSYDSSDYAGSDMEGTAANRTELRKQISESCREIIDEFDRGNGDARSLERDAAGAYRKLAATLGRAGEGSPPLFGKVMRHIGGRLVALMHEVSGGASPSTDDDSASEPGALARSKSHDILEATASRGSVASDCERFSWRGSFESALLAADSRGTLGGAGCEARRSPAALDLAAQKSHSRSCGAISGSEDRLWRGRRRASAPDAEVRQ

Summary

Uniprot
A0A2H1V6M8   A0A0L7KZV0   A0A212EYT3  
Pubmed
26227816    22118469   
EMBL
ODYU01000935    SOQ36449.1    JTDY01004047    KOB68670.1    AGBW02011440    OWR46658.1    + More
Proteomes
UP000037510    UP000007151   
Pfam
PF00168   C2
Interpro
IPR035892   C2_domain_sf        + More
IPR001565   Synaptotagmin       
IPR000008   C2_dom       
Gene 3D
2.60.40.150    
ProteinModelPortal
A0A2H1V6M8   A0A0L7KZV0   A0A212EYT3  

Ontologies

KEGG
101746698    K17598 synaptotagmin-like protein | (RefSeq) uncharacterized LOC101746698
GO
GO:0016020  

Topology

Length:
1460
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.11028
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00488
outside
1  -  1460
 
 

Population Genetic Test Statistics

Pi
257.946859
Theta
212.70361
Tajima's D
0.561323
CLR
0.461879
CSRT
0.531273436328184
Interpretation
Uncertain
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