SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05149  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA012472
Annotation
PREDICTED:_acidic_leucine-rich_nuclear_phosphoprotein_32_family_member_A_isoform_X1_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 4.218
 

Sequence

CDS
ATGGAAAAGAGGATCATCTTGGAACGCAGAGGGAGGGATCCTTCACAGGTGAAAGAACTGAATCTGGATAACTGCAGGAGTACGAACATAGTTGGTTTAACAGATGAATATACAAATTTACAAATACTGAGTCTTAACAATGTGGGTCTCACAACACTCAAAGGTTTTCCGACCCTGCCTATGCTCAGAAAATTGGAACTGTCAGACAATAGAATATCAAATGGACTGACTTTTCTCAGTGGCTGCAAAAAGCTTGCACATTTGAATCTTTCAGGAAACAAAATTAAGGATTTAGAAACCCTGAAGCCTCTTGAAGCTTTCAAGAATCTGAAGAATCTTGACTTATTCAATAATGATGTTACTAGCATTGAAGACTACAAAAGTAAGGTGTTTGCTATGCATCCATCACTAAAATACTTAGACGGTTTTGATAAGTATGACCAAGAAGCTGATGACAGTGACATAGAAGAAGAAGATGAAATGAATGGAAACAATGATAGTGATGAGGATGATTTGGACATAGATATTGGTTCATTGGTGATTGATGACAGTATAACAGAAAAGCCAGAGCATGAAAGAACCACTTTACCAATGATATTGTACACGGTTTATGGTCTACTCTTCCACATGAGTTACCTTTTGAAGAGATCTGATGAAGAAGAGGAAGAGGAAGATGAGGATGATGAGGATGTTTCACTCTGTGCAGTTTATAATGCGGAGGAAGAGAGTTCATCTAGTTCAATATTTGAAGGCAGCGATGTTGAAGAAGAAGAAGAAGTGGATGAGGAAGATGATGAAGGAGAAAACAATGCTGATGGTGAACAAGAACAAAATTCGAAAGGGCAAGATGGAGATGCAGATGGTGAGCCTGAAGAAAGTACTCGGGGTAAGAAACGGAAACATGAAGATGATGATGAAAACTGA
Protein
MEKRIILERRGRDPSQVKELNLDNCRSTNIVGLTDEYTNLQILSLNNVGLTTLKGFPTLPMLRKLELSDNRISNGLTFLSGCKKLAHLNLSGNKIKDLETLKPLEAFKNLKNLDLFNNDVTSIEDYKSKVFAMHPSLKYLDGFDKYDQEADDSDIEEEDEMNGNNDSDEDDLDIDIGSLVIDDSITEKPEHERTTLPMILYTVYGLLFHMSYLLKRSDEEEEEEDEDDEDVSLCAVYNAEEESSSSSIFEGSDVEEEEEVDEEDDEGENNADGEQEQNSKGQDGDADGEPEESTRGKKRKHEDDDEN

Summary

Interpro
IPR001611   Leu-rich_rpt        + More
IPR032675   LRR_dom_sf       
Gene 3D
PDB
4XOS     E-value=3.52457e-25,     Score=284

Ontologies

Topology

Length:
307
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.39691
Exp number, first 60 AAs:
0.05041
Total prob of N-in:
0.08457
outside
1  -  307
 
 

Population Genetic Test Statistics

Pi
231.095866
Theta
190.442867
Tajima's D
0.720685
CLR
0.357197
CSRT
0.576871156442178
Interpretation
Uncertain
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