SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05146
Annotation
PREDICTED:_uncharacterized_protein_LOC105841306_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.223
 

Sequence

CDS
ATGCTAGAGATTTTCGTTGCAGAAGAGGCATCGATTATTGGCAGTCCCGGCGAAGAACTACCTTCACACTGGTGTGAACATGAGATCGCAAGGCATAAACGCAAAAAACTTAAATTGCAACCCCATATTAGGGATACGAACTGTCCTGAAACGCTAGATTTGGAGCGTCGTCGCCGTCGTCGGCGGAGGCGCACCCAGCACCAACACACACGGAAGCCTAAAAAACATCGAACACTCCTAGTATCTGCTATTGATGAACAGGCGAAAGTCATACATGTGCTTGACCCTGACGAGTTGCCACGCCGTGCTCGCTACACGATTATGGTGACGGCCTGCCTGCTGCTATTCCTGTGCTTGCTGCTTGTTGGTGTTACCCTGCGAATGGCTCCTCTAATTGATGATATGGGTAAGTTCTGCTAA
Protein
MLEIFVAEEASIIGSPGEELPSHWCEHEIARHKRKKLKLQPHIRDTNCPETLDLERRRRRRRRRTQHQHTRKPKKHRTLLVSAIDEQAKVIHVLDPDELPRRARYTIMVTACLLLFLCLLLVGVTLRMAPLIDDMGKFC

Summary

Ontologies

Topology

Length:
139
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
21.94887
Exp number, first 60 AAs:
0.00043
Total prob of N-in:
0.65767
inside
1  -  108
TMhelix
109  -  131
outside
132  -  139
 
 

Population Genetic Test Statistics

Pi
227.538482
Theta
38.560401
Tajima's D
2.841711
CLR
0.177606
CSRT
0.973651317434128
Interpretation
Uncertain
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