Gene

KWMTBOMO05143

Pre Gene Modal

BGIBMGA012499

Annotation

PREDICTED:_homeobox_protein_ceh-19-like_[Papilio_polytes]

Location

Bomo_Chr9(-):8842870-8844142      View in EpiBrowser

Full name

Homeobox protein ceh-19      

Transcription factor

Homeobox

Location in the cell

Nuclear   Reliability : 3.781

CDS

ATGAATGACAAGAACAACAGAAGACCTCGACGAGCCGGACCTGAACGCAAGCCACGACAAGCTTACAGCGCTAAACAACTAGAGCGATTAGAAGCCGAATTTAAATTGGACAAGTACCTCAGCGTTTCAAAGAGGATGGAACTTTCAAAAGCATTAGGTCTGACAGAAGTACAAATTAAGACCTGGTTCCAGAACCGCAGAACGAAATGGAAGAAGCAGCTAACATCTCGTTTGAAAATCGCACAACGTCAAGGTCTCTTTTCTGGTCAAATCTTCGGACATGCCCCGCAAACTTATTCCCTTTTAAATCCTTACGCGTATGCGCCGCTCAGCTGTGTTTTTACCCCTGTAACATTGCCTTCTACTCCACCATAA

Protein

MNDKNNRRPRRAGPERKPRQAYSAKQLERLEAEFKLDKYLSVSKRMELSKALGLTEVQIKTWFQNRRTKWKKQLTSRLKIAQRQGLFSGQIFGHAPQTYSLLNPYAYAPLSCVFTPVTLPSTPP

Keywords

Alternative splicing   Complete proteome   Developmental protein   DNA-binding   Homeobox   Nucleus   Reference proteome  

Feature

chain  Homeobox protein ceh-19
splice variant  In isoform a.

Uniprot

H9JSI8   A0A2A4IY99   A0A194PEC8   A0A212EN52   A0A2H1V671   A0A0L7KZR4   + More
A0A1W4WRJ6   D6WAI4   A0A067RRU1   A0A2J7RAG1   A0A2A3E468   N6U3V5   U4UF94   A0A088AEU2   E2C9I3   A0A310S983   A0A1B0CZJ5   A0A0N0BGB2   E9J2H2   A0A151I1J6   F4X620   A0A151WUH1   A0A195C7Q0   A0A158NN00   A0A151IY65   A0A151JZV2   E2ALI4   A0A0C9S2H9   A0A026WY41   A0A0L7R4I2   A0A154PKZ2   A0A232ETK5   A0A336KMZ2   K7IYG2   B0WWU2   A0A0Q9W811   B4K4F7   A0A1J1HRK6   T1HA97   A0A2S2R9R7   J9LIZ8   A0A3L8DKU7   A0A0P8XWM3   A0A0R3P184   P26797-2   A0A261BH12   P26797   A0A2A6CTS8   A0A0N8DXZ1   A0A260ZQI4   A0A2P4W6K9   A0A1I7WMU5   A0A1I8CST3   C3YL06   A0A0B1TRP5  

Pubmed

19121390    26354079    22118469    26227816    18362917    19820115    + More
24845553    23537049    20798317    21282665    21719571    21347285    24508170    28648823    20075255    17994087    30249741    15632085    1352400    9851916    18806794    26114425    26394399    23874975    26829753    18563158   

EMBL

BABH01027930    NWSH01005539    PCG64142.1    KQ459606    KPI91383.1    AGBW02013750    + More
OWR42881.1    ODYU01000891    SOQ36328.1    JTDY01004152    KOB68524.1    KQ971312    EEZ98636.2    KK852505    KDR22504.1    NEVH01006570    PNF37822.1    KZ288383    PBC26505.1    APGK01043549    KB741015    ENN75301.1    KB632161    ERL89261.1    GL453868    EFN75385.1    KQ763531    OAD55013.1    AJVK01009607    KQ435788    KOX74531.1    GL767845    EFZ12978.1    KQ976560    KYM80588.1    GL888761    EGI58114.1    KQ982729    KYQ51569.1    KQ978231    KYM96173.1    ADTU01020794    KQ980775    KYN13241.1    KQ981374    KYN42388.1    GL440609    EFN65686.1    GBYB01015116    JAG84883.1    KK107072    EZA60636.1    KQ414657    KOC65734.1    KQ434948    KZC12493.1    NNAY01002263    OXU21691.1    UFQS01000487    UFQT01000487    SSX04343.1    SSX24707.1    DS232152    EDS36203.1    CH940657    KRF80925.1    CH933806    EDW13909.2    CVRI01000020    CRK90611.1    ACPB03019798    GGMS01016899    MBY86102.1    ABLF02031382    ABLF02031384    ABLF02031390    QOIP01000007    RLU20792.1    CH902618    KPU79126.1    CH475408    KRT05309.1    Z11794    Z11795    FO080909    NIPN01000140    OZG09493.1    ABKE03000020    PDM81457.1    GDIQ01080940    JAN13797.1    NMWX01000063    OZF87867.1    LFJK02000008    POM45197.1    GG666525    EEN58997.1    KN549303    KHJ98507.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000007151    UP000037510    UP000192223    + More
UP000007266    UP000027135    UP000235965    UP000242457    UP000019118    UP000030742    UP000005203    UP000008237    UP000092462    UP000053105    UP000078540    UP000007755    UP000075809    UP000078542    UP000005205    UP000078492    UP000078541    UP000000311    UP000053097    UP000053825    UP000076502    UP000215335    UP000002358    UP000002320    UP000008792    UP000009192    UP000183832    UP000015103    UP000007819    UP000279307    UP000007801    UP000001819    UP000001940    UP000216463    UP000232936    UP000216624    UP000237256    UP000095283    UP000095286    UP000001554   

PRIDE

H9JSI8    P26797   

Pfam

PF00046   Homeodomain

Interpro

IPR001356   Homeobox_dom        + More
IPR017970   Homeobox_CS       
IPR009057   Homeobox-like_sf       
IPR020479   Homeobox_metazoa       
IPR000047   HTH_motif       

SUPFAM

SSF46689   SSF46689       

CDD

cd00086  homeodomain

ProteinModelPortal

H9JSI8   A0A2A4IY99   A0A194PEC8   A0A212EN52   A0A2H1V671   A0A0L7KZR4   + More
A0A1W4WRJ6   D6WAI4   A0A067RRU1   A0A2J7RAG1   A0A2A3E468   N6U3V5   U4UF94   A0A088AEU2   E2C9I3   A0A310S983   A0A1B0CZJ5   A0A0N0BGB2   E9J2H2   A0A151I1J6   F4X620   A0A151WUH1   A0A195C7Q0   A0A158NN00   A0A151IY65   A0A151JZV2   E2ALI4   A0A0C9S2H9   A0A026WY41   A0A0L7R4I2   A0A154PKZ2   A0A232ETK5   A0A336KMZ2   K7IYG2   B0WWU2   A0A0Q9W811   B4K4F7   A0A1J1HRK6   T1HA97   A0A2S2R9R7   J9LIZ8   A0A3L8DKU7   A0A0P8XWM3   A0A0R3P184   P26797-2   A0A261BH12   P26797   A0A2A6CTS8   A0A0N8DXZ1   A0A260ZQI4   A0A2P4W6K9   A0A1I7WMU5   A0A1I8CST3   C3YL06   A0A0B1TRP5  

PDB

2ME6     E-value=1.04428e-10,     Score=153

KEGG

101736130    no KO assigned | (RefSeq) homeobox protein B-H1

GO

GO:0043565   GO:0006355   GO:0005634   GO:0003677   GO:0007275   GO:0016020   GO:0030170   GO:0007166   GO:0016616   GO:0046168   GO:0016491   GO:0003824  

Subcellular location

Nucleus  

Length:

124

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.81881

Exp number, first 60 AAs:

0.00013

Total prob of N-in:

0.77942

inside

1  -  124

 

 

Pi

267.204652

Theta

161.005237

Tajima's D

2.180082

CLR

0

CSRT

0.907954602269887

Interpretation

Uncertain