SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05137
Annotation
olfactory_receptor_60_[Bombyx_mori]
Full name
Odorant receptor      
Location in the cell
PlasmaMembrane   Reliability : 2.442
 

Sequence

CDS
ATGACGCAACTTTTGTCTAGTATGGCCGGCATCTGCGTGGTAATGGTTCAAGTTTCGCAAGACGCATCCAGTTTCAAATCGGTCAGGCTTGTCACATCGTTGGCTTTCTTTTTCGCTATGGTCATACAGTTGGCCATACAATGTTTCACTGGCAATGAACTGACTATACAAGCTGAGAGAATTGCGGATGCAGTAATGGAAAGTAAATGGGAGAAGATGCCAGTGAGACTGCGACGCCTTCTCTTGGTGACGATGATGCGTGCCCAACGTCCTCTGCACCTTACAGCTGCTGGATTCGCCTATATCGACAACACTTGCTTTCTCTCGATCCTGAAAGCAGCTTATTCGTATTACGCAGTTCTTAGTCAGAAACAAGGCTGA
Protein
MTQLLSSMAGICVVMVQVSQDASSFKSVRLVTSLAFFFAMVIQLAIQCFTGNELTIQAERIADAVMESKWEKMPVRLRRLLLVTMMRAQRPLHLTAAGFAYIDNTCFLSILKAAYSYYAVLSQKQG

Summary

Similarity
Belongs to the insect chemoreceptor superfamily. Heteromeric odorant receptor channel (TC 1.A.69) family.
EMBL
AB472137    BAH66354.1    KM597219    AIT69896.1    KX084474    ARO76429.1    + More
LC002718    BAR43466.1    KT588109    AOE48019.1    KM678319    AJE25892.1    KM655557    AIT72007.1    KM892393    AJF23808.1    GDKB01000053    JAP38443.1    KY283615    AST36274.1    GCVX01000204    JAI18026.1    MG816607    AXF48792.1    KY707184    AVF19626.1    RSAL01000027    RVE51930.1    KX655998    AOG12947.1    KY283666    AST36325.1    ODYU01006040    SOQ47528.1    MH193970    AZB49416.1    KQ459984    KPJ18900.1    MG546610    AYD42233.1    GENK01000050    JAV45863.1    KQ459606    KPI91377.1    MH050673    AZT78932.1    KF768694    AIG51888.1    KZ149974    PZC75965.1    KP975136    ALT31655.1    KF487656    AII01054.1    KF487707    AII01105.1    KX585329    ARO70222.1    AGBW02008702    OWR52750.1    BABH01027936    KY707193    AVF19635.1    KY817056    AVH87272.1    ODYU01003636    SOQ42640.1    KF487709    AII01107.1    KP975153    ALT31672.1    KX655999    AOG12948.1    KX585340    ARO70233.1    KJ186824    AIX97136.1    KJ542693    AJD81577.1    GGOB01000120    MCH29516.1    LN885125    CUQ99414.1    KY964953    ASM47106.1    MF975442    AUF73018.1    MG816587    AXF48772.1    MG766186    AVN97856.1    GCVX01000177    JAI18053.1    KY817039    AVH87255.1    MF385083    MF385084    AWT23255.1    AWT23256.1    KM597203    AIT69880.1    KM655539    AIT71989.1    KT381550    ALR72556.1    SOQ42639.1    KY707221    AVF19663.1    KZ150021    PZC74882.1    LN885110    CUQ99399.1    KY817051    AVH87267.1    KP843237    ALD51373.1    KF768712    AIG51906.1    PZC74884.1    KM678302    AJE25875.1    KM892375    AJF23790.1    KP843286    ALD51422.1    FJ170766    ACH73301.1    KP975157    ALT31676.1    KY283597    AST36257.1    MF385147    AWT23318.1    KY283650    AST36309.1    KQ459596    KPI95260.1    JN836679    AFC91719.1    KX084481    ARO76436.1    MF385146    AWT23317.1    KY283728    AST36387.1    NWSH01002961    PCG67211.1    KR935754    ALM26246.1    KT588148    AOE48058.1    KX609513    KB465925    ARN17920.1    RLZ02205.1    KY964940    ASM47093.1    KX298813    APC94330.1    GL762231    EFZ21798.1    KP843278    ALD51414.1    BK005953    DAA06003.1    AB472124    BAH66342.1    FX982916    BAU20242.1    APGK01024014    APGK01024015    KB740529    ENN80463.1    KY399302    AQQ73533.1    MF975433    AUF73009.1    KM597218    AIT69895.1    MG766182    AVN97852.1    KM251666    AKC58547.1    KB467029    RLZ02277.1    KP296774    AJO62238.1    KY817059    AVH87275.1    KF768658    AIG51852.1    KM655556    AIT72006.1    KK852794    KDR16425.1    KF487670    AII01068.1    KM678318    AJE25891.1   
Pfam
PF02949   7tm_6
Interpro
IPR004117   7tm6_olfct_rcpt       
PDB
6C70     E-value=0.0343827,     Score=80

Ontologies

Topology

Subcellular location
Cell membrane  
Length:
126
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
34.0119
Exp number, first 60 AAs:
19.08567
Total prob of N-in:
0.41042
POSSIBLE N-term signal
sequence
outside
1  -  126
 
 

Population Genetic Test Statistics

Pi
244.336742
Theta
179.763382
Tajima's D
1.247043
CLR
0.388813
CSRT
0.724663766811659
Interpretation
Uncertain
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