Gene

KWMTBOMO05136

Pre Gene Modal

BGIBMGA012502

Annotation

PREDICTED:_LOW_QUALITY_PROTEIN:_putative_sodium-dependent_multivitamin_transporter_[Bombyx_mori]

Location

Bomo_Chr9(-):8758150-8773872      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.972

CDS

ATGGCGTTATCAGTATTTGGAATATGTGACTACCTTATAATGGTAGCGACTATGATCGCTTCTGTGGCTATTGGAGTCTATTTCCGATTTAGTGGAGGAAAACAGAAAACAAACGAGGAATACCTCTTAGCCGATAGAAACATGTCAATATTACCGGTCGCGGTTTCATTAATGGCCTCATTCATGTCGGCGATTACTCTTCTGGGAGTGTCGGCAGAAAACTACTATTTCGGCATGCAATTCGTTATCATAAATATAGCCTACTTCTTAGCAACTCCGATAGCTAGTAGATTATATCTACCCGTGTTCTTTGGCCTTCAAAAAACAAGTACCTATGAGTACTTAGAACTGAGATTTGGGTCTCAAATACGTATGCTGGCGTCTCTGACGTACACTTTACAAATGTTATTGTACAATGGCATAGTGCTTTATGCTCCAGCTATTGTATTAGAATCTGTGACTGGTTTAGACAGGATAATATCGATACTAGTTGTAGGCTTAGCTTGTACGTTTTACTCGACTTTAGGAGGGATGAAGGCCGTATTATTTACTGATTTACTGCAGTCTTTGCTGATGTTTGCCGCTGTGTTGAGTGTGGTGGTATTTAGCGCAGTCCAAGTCGGCGGATTCGGACAAATATTTGTTCGTGCCCGGGAAGGTGGACGATTAGACTTTTCCAATTTCAGTGTAGATCCCACCCAGAGGCACACTTGGTGGTCACTCATTATTGGAGGAATGATAACTTACTTATCACTGTATGCTGTCAATCATACTCAGGTACAACGTCTGTTAACAGTGAGCACGTTGGACCGATCCCAGCAGTGCCTCTGGTGGAATTTGCCCGTGATGTCTGCTCTCAGTATCATTACATGCATCAGTGGATTAGGCATCTACGCCGTCTATAAAGACTGTGATCCGTTGACTTATCACGGAATTACTGCTATTGACCAACTGATGCCTTACTACGTGGTACAAATGATGAAGTCAGCTCCCGGTCTTCTAGGATTATTCATCGCTGGTATATTCAGTGCTTCCCTCTCCACGATATCAGCGGCTTGTAATGCACTGGCCGCAGTGACTCTAACTGATTACGTCAACAGATGGTTCTTAATACCTTCATCCTATATACCCTGGATGACAAAGCTAGCAGCCTGTACTTATGGATTCCTATTCCTCGGCCTTGCTTTCTTGGCTGAACATTTAGGAGGGGTATTGCAAGCAGCTTTGACTATCTTTGGAGCTGTTGGGGGCCCGTTGTTCGGAGTTTTTACTTTAGGCATGTTTACTACTTTTGCAAATGAGAGGGGCGCATTCGTCGCTCTATTAACTGGCATGGCGCTTACTCTGTGGATGAGTTTCGGCGGACCGCGACCGACGCCTGCGAAACTGCCGCTAAGCGTAGACGGATGCGGTTTTAATGTCACCAATCCACTACCGGCCGTGTCGACGAACTTCAGTGACTACTTTTACCCGTACAGAATATCGTACATGTGGACCAGTCCGATTGGATTCGTCTGGGTGTTAGCTGTTGGGACAGCGATATCTTTAGTGTGGCGACAGCAACAACCATGGGAACGCGATGGGAAACCCCATCCTGACCCCGCGCTCTTCACTCCGCCCCTTGCCAAGCTACTTAGAAAGAAATATGGTGATAAGCCTCCCGTACAGCGCGGATTATTGAAGGAATCAAGTCTACATAATTAA

Protein

MALSVFGICDYLIMVATMIASVAIGVYFRFSGGKQKTNEEYLLADRNMSILPVAVSLMASFMSAITLLGVSAENYYFGMQFVIINIAYFLATPIASRLYLPVFFGLQKTSTYEYLELRFGSQIRMLASLTYTLQMLLYNGIVLYAPAIVLESVTGLDRIISILVVGLACTFYSTLGGMKAVLFTDLLQSLLMFAAVLSVVVFSAVQVGGFGQIFVRAREGGRLDFSNFSVDPTQRHTWWSLIIGGMITYLSLYAVNHTQVQRLLTVSTLDRSQQCLWWNLPVMSALSIITCISGLGIYAVYKDCDPLTYHGITAIDQLMPYYVVQMMKSAPGLLGLFIAGIFSASLSTISAACNALAAVTLTDYVNRWFLIPSSYIPWMTKLAACTYGFLFLGLAFLAEHLGGVLQAALTIFGAVGGPLFGVFTLGMFTTFANERGAFVALLTGMALTLWMSFGGPRPTPAKLPLSVDGCGFNVTNPLPAVSTNFSDYFYPYRISYMWTSPIGFVWVLAVGTAISLVWRQQQPWERDGKPHPDPALFTPPLAKLLRKKYGDKPPVQRGLLKESSLHN

Similarity

Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.

Uniprot

A0A2A4J858   A0A2W1BLM0   A0A2A4J950   A0A194PDF8   A0A437BNF5   A0A2H1W3B3   + More
A0A194PJV6   A0A0L7LLE5   A0A194RMZ9   A0A1Y1K0U1   A0A1Y1K0W9   A0A1Y1K127   A0A1Y1K0V3   J3JWA1   N6TW03   N6T083   W8BLK9   A0A182W1E8   A0A182RXP5   D6WJW4   A0A182YGR2   A0A182IJ72   A0A182NLF2   A0A182PKP7   U5EW06   A0A182Q3I9   U5EVD2   A0A1L8DF14   A0A2M4BHR8   W5JBY9   A0A2M4AFP2   A0A182V5C8   A0A2M4BHU7   Q7QB40   A0A182FSB5   A0A182UEH1   A0A0A1XGG9   A0A182M8Q9   A0A1S4FCK0   A0A1I8M662   A0A1Q3FDK3   Q177I0   A0A1Q3FBD4   A0A0K8WMM0   A0A1Q3FDF5   B0WU59   A0A182XJ67   A0A182I7P3   A0A182JQ24   A0A1I8PQL8   E9GP61   A0A026X1Y2   Q8I923   A0A182H517   A0A232F6S4   A0A0N8CW20   A0A0P5QMF0   U5EVE6   A0A0P6E8F0   A0A182T9P8   A0A0N8DXH3   A0A0L7R0H8   A0A0P5SZS6   A0A195EY23   A0A0P5N8J5   A0A0P5W478   A0A0P5XC05   A0A023EX78   A0A0P6FMK5   A0A1A9ZED7   A0A1A9XLM6   A0A0P5WZX6   A0A1L8ECI2   A0A1L8EC33   A0A1L8EC39   A0A067RCW7   B4PAN2   F4X3J0   A0A2M4AGL8   A0A1A9W305   A0A1B0B6B1   A0A336M4V5   A0A158NRN4   Q5R281   Q5R268   A0A1A9VUD5   A0A154NY42   B4LPN3   B3NK51   A0A0P6EQF8   A0A1W4V4U7   A0A0P5AG34   Q8SWV5   A0A087ZNV1   A0A151X8Z7   B4QEL6   A0A2A3EQG2   A0A0M8ZXX9   A0A1B6C0C0  

Pubmed

28756777    26354079    26227816    28004739    22516182    23537049    + More
24495485    18362917    19820115    25244985    20920257    23761445    12364791    14747013    17210077    25830018    25315136    17510324    21292972    24508170    30249741    26483478    28648823    24945155    24845553    17994087    17550304    21719571    21347285    15729003    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    22936249   

EMBL

NWSH01002573    PCG67946.1    KZ149974    PZC75982.1    PCG67942.1    KQ459606    + More
KPI91376.1    RSAL01000027    RVE51931.1    ODYU01006040    SOQ47527.1    KPI91375.1    JTDY01000637    KOB76383.1    KQ459984    KPJ18897.1    GEZM01096160    GEZM01096152    GEZM01096149    JAV55122.1    GEZM01096155    JAV55119.1    GEZM01096151    JAV55123.1    GEZM01096153    GEZM01096150    JAV55124.1    BT127519    AEE62481.1    APGK01049912    APGK01049913    APGK01049914    APGK01049915    KB741159    ENN73470.1    ENN73469.1    GAMC01016021    JAB90534.1    KQ971342    EFA03653.1    GANO01001653    JAB58218.1    AXCN02000131    GANO01001909    JAB57962.1    GFDF01009109    JAV04975.1    GGFJ01003392    MBW52533.1    ADMH02001952    ETN60334.1    GGFK01006262    MBW39583.1    GGFJ01003422    MBW52563.1    AAAB01008880    EAA08654.4    GBXI01015079    GBXI01004694    JAC99212.1    JAD09598.1    AXCM01001304    GFDL01009473    JAV25572.1    CH477376    EAT42297.1    GFDL01010164    JAV24881.1    GDHF01000164    JAI52150.1    GFDL01009513    JAV25532.1    DS232101    EDS34779.1    APCN01002523    GL732556    EFX78734.1    KK107021    QOIP01000011    EZA62320.1    RLU16562.1    AY063742    AAL38977.1    JXUM01110571    KQ565425    KXJ70994.1    NNAY01000868    OXU26138.1    GDIP01093287    JAM10428.1    GDIQ01211898    GDIQ01122120    GDIQ01075653    GDIQ01039813    JAL29606.1    GANO01001911    JAB57960.1    GDIQ01066346    JAN28391.1    GDIQ01082284    JAN12453.1    KQ414670    KOC64350.1    GDIP01133032    JAL70682.1    KQ981931    KYN32797.1    GDIQ01145737    JAL05989.1    GDIP01091632    JAM12083.1    GDIP01074397    JAM29318.1    GAPW01000609    JAC12989.1    GDIQ01057302    JAN37435.1    GDIP01079836    JAM23879.1    GFDG01002490    JAV16309.1    GFDG01002491    JAV16308.1    GFDG01002489    JAV16310.1    KK852543    KDR21691.1    CM000158    EDW91423.1    GL888613    EGI59018.1    GGFK01006610    MBW39931.1    JXJN01009045    UFQS01000397    UFQT01000397    SSX03608.1    SSX23973.1    ADTU01024212    ADTU01024213    AB162350    BAD72905.1    AB162351    CH480816    BAD72923.1    EDW48677.1    KQ434781    KZC04501.1    CH940648    EDW60271.1    CH954179    EDV55286.1    GDIQ01059850    JAN34887.1    GDIP01199624    JAJ23778.1    AE013599    AY095060    AAF57489.2    AAM11388.1    KQ982409    KYQ56790.1    CM000362    CM002911    EDX07890.1    KMY95235.1    KZ288204    PBC33281.1    KQ435798    KOX73365.1    GEDC01030350    JAS06948.1   

Proteomes

UP000218220    UP000053268    UP000283053    UP000037510    UP000053240    UP000019118    + More
UP000075920    UP000075900    UP000007266    UP000076408    UP000075880    UP000075884    UP000075885    UP000075886    UP000000673    UP000075903    UP000007062    UP000069272    UP000075902    UP000075883    UP000095301    UP000008820    UP000002320    UP000076407    UP000075840    UP000075881    UP000095300    UP000000305    UP000053097    UP000279307    UP000069940    UP000249989    UP000215335    UP000075901    UP000053825    UP000078541    UP000092445    UP000092443    UP000027135    UP000002282    UP000007755    UP000091820    UP000092460    UP000005205    UP000001292    UP000078200    UP000076502    UP000008792    UP000008711    UP000192221    UP000000803    UP000005203    UP000075809    UP000000304    UP000242457    UP000053105   

PRIDE

Q8SWV5   

Pfam

PF00474   SSF

Interpro

IPR001734   Na/solute_symporter        + More
IPR038377   Na/Glc_symporter_sf       
IPR018212   Na/solute_symporter_CS       

Gene 3D

1.20.1730.10    

ProteinModelPortal

A0A2A4J858   A0A2W1BLM0   A0A2A4J950   A0A194PDF8   A0A437BNF5   A0A2H1W3B3   + More
A0A194PJV6   A0A0L7LLE5   A0A194RMZ9   A0A1Y1K0U1   A0A1Y1K0W9   A0A1Y1K127   A0A1Y1K0V3   J3JWA1   N6TW03   N6T083   W8BLK9   A0A182W1E8   A0A182RXP5   D6WJW4   A0A182YGR2   A0A182IJ72   A0A182NLF2   A0A182PKP7   U5EW06   A0A182Q3I9   U5EVD2   A0A1L8DF14   A0A2M4BHR8   W5JBY9   A0A2M4AFP2   A0A182V5C8   A0A2M4BHU7   Q7QB40   A0A182FSB5   A0A182UEH1   A0A0A1XGG9   A0A182M8Q9   A0A1S4FCK0   A0A1I8M662   A0A1Q3FDK3   Q177I0   A0A1Q3FBD4   A0A0K8WMM0   A0A1Q3FDF5   B0WU59   A0A182XJ67   A0A182I7P3   A0A182JQ24   A0A1I8PQL8   E9GP61   A0A026X1Y2   Q8I923   A0A182H517   A0A232F6S4   A0A0N8CW20   A0A0P5QMF0   U5EVE6   A0A0P6E8F0   A0A182T9P8   A0A0N8DXH3   A0A0L7R0H8   A0A0P5SZS6   A0A195EY23   A0A0P5N8J5   A0A0P5W478   A0A0P5XC05   A0A023EX78   A0A0P6FMK5   A0A1A9ZED7   A0A1A9XLM6   A0A0P5WZX6   A0A1L8ECI2   A0A1L8EC33   A0A1L8EC39   A0A067RCW7   B4PAN2   F4X3J0   A0A2M4AGL8   A0A1A9W305   A0A1B0B6B1   A0A336M4V5   A0A158NRN4   Q5R281   Q5R268   A0A1A9VUD5   A0A154NY42   B4LPN3   B3NK51   A0A0P6EQF8   A0A1W4V4U7   A0A0P5AG34   Q8SWV5   A0A087ZNV1   A0A151X8Z7   B4QEL6   A0A2A3EQG2   A0A0M8ZXX9   A0A1B6C0C0  

PDB

5NVA     E-value=2.75777e-21,     Score=253

KEGG

101743671    K14388 solute carrier family 5 (sodium-coupled monocarboxylate transporter), member 8/12 | (RefSeq)

GO

GO:0022857   GO:0016021   GO:0005739   GO:0005215   GO:0006810   GO:0016020   GO:0030151   GO:0030170   GO:0007166   GO:0016616   GO:0046168   GO:0016491   GO:0003824   GO:0055085  

Length:

567

Number of predicted TMHs:

13

Exp number of AAs in TMHs:

287.725570000001

Exp number, first 60 AAs:

33.43928

Total prob of N-in:

0.00829

POSSIBLE N-term signal

sequence

outside

1  -  3

TMhelix

4  -  26

inside

27  -  46

TMhelix

47  -  69

outside

70  -  83

TMhelix

84  -  106

inside

107  -  126

TMhelix

127  -  149

outside

150  -  158

TMhelix

159  -  181

inside

182  -  192

TMhelix

193  -  215

outside

216  -  234

TMhelix

235  -  257

inside

258  -  277

TMhelix

278  -  300

outside

301  -  331

TMhelix

332  -  354

inside

355  -  374

TMhelix

375  -  397

outside

398  -  406

TMhelix

407  -  429

inside

430  -  435

TMhelix

436  -  453

outside

454  -  495

TMhelix

496  -  518

inside

519  -  567

 

 

Pi

215.493594

Theta

172.473944

Tajima's D

1.234378

CLR

0.150846

CSRT

0.723813809309535

Interpretation

Uncertain