Gene

KWMTBOMO05135

Annotation

PREDICTED:_centrosomal_protein_of_290_kDa-like_[Amyelois_transitella]

Location

Bomo_Chr9(+):8744853-8752653      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.924

CDS

ATGATTCGAAAAGGAAGCGACTCCGGCGCCTCGAACACTGAAACCCTGAAAGAATTCGTCAATAAATATACTATGAAAATTGCGCTATTAGAAGATGAGTGCTTTAGACTAAAAAGGGAACTTGAAGAATGCAAAGCTGATAAGACAATATACCAAAATGAGATTGAGCGCTGGAAAGATTTGGCTTCCGAGAGACTGATAAAAATGGAACAGCTGAACTCTCAACTCGAAGAAAGACATTCTCAAGAGGTAGAGTCATATAAAGCTGAAAATCAACATTGGCTATCGCAATTAAACGATACACAAAAGGAGCATAATGAACTCCGATCTCGTCTAACGGAGCAAAAGGCTTTATACCTAAAACAGTTGGCGGATAAAGATGCACACATTGAAAACTTACGTACCGTCGTCCACGGCTTAAAGACGCAGATTATGAACATGCAAACCATGCTGGCAGTCAACGATCCAAGTTTCGATTTATCTGCTATTGTGGAAATTGAAGAAACTAGTGATGTTATGTCTCAAACGGGTTCGGATCGATTGGAAATCAAATTTGATTCAACAACAGATATACATGAAGAAATGGTTAAAATACCCGGTTCTTCGACTACTATTTGGCAGGAAACAATTATTGAACGCTTACGTCGCGAGAAGCAACTTGCAGGGAAACAGAATGCTATATTGCGTCGCCAAATTAAAGCCCTTGCTGCTAGGGAAAGACGGGCACGCCTTGATGCCCAAAATTTGAAAAATCAAGTTTTCAGAATTAGCACATCTGGTAATAAAGTTGCAACGGCAGAAACCGCAGCACTACACAACAAGATAGGTTCGCTACAAGCGCAGTTGACAAGCGCTAGGCGCGACACTCAAACCAACGTTGCTTTGTGGGATAAATGGAAGAGGGCACAACAATTATCGGAACGCTGGCAAGCGAAATACGAAGAAAAATGTCAAGAAATAAAAAAGGTCGAATCAAATTTAGCTCTAACTAAGTCTGCTGTTGTGAGACTAGAAAAAGAGAAACGTGTGCTGTTCGCTCGACTAAATGAATTAAAATATAACACTGATTTAGCTGTAGAAAAACAAGAAGAAGAACCATTAGAAAAAAGTCATAAAAATATGGCAGATAATTGTACTTCTTATACGCACGGTGTCTCGAATGTTCCTTTGTTATCTACGCAGTCTCTGATGGATAGGATACAGGCTCAGCAAAGAAGGATTGCCGCTTTAGAGCTTTCTGAAAAAGGCAACGAGCATCTTGTTTCCGAGTATGAGAAAGCTTTAGCCGAGATTACCTCGCTGAAGGGCCAAGTACTAAAACTGGAGTCAACTTTATTGGAATCACAAATAAAAATTCCACTAAAGACTTGTAATGATGAGAAACCCGAACTGGAATACTGGAAAAGCTACTGCGAAATGCTAAAAGAAGAGAACGTTCAACTTAATTTACGGGTTAATTCGTTGGAGACGATTCCAACAACTGGTCACCAACACAGAATTGCTGATCTTGAACAAACTGTACTAACACTCAGAGGTCTTGTTGGTAAGCTGCAAGCGAAGCAGAAAAGCGCTGGAGCTGTGAAACGTACAGAGTCGCGACCAAGTAGCGGGAAAAGTGCTTCAGAAAAGAATCGTACTCAACTAGAATCATATCGCGTTGAAATCGCAAACCTAAAACGCAGTATACAAGACAAGGATTTACTGTTGGAGCGATCTAAAGAAATGCTCAAAATAGCCGCTGAGCGTGAAGACGAACTTTTGAGAGAGAACCTGTTATTACGTCGTCGTATTGATGACCTTATTGCTCCGAAAGAAGGATTCTTATCAGCCTAA

Protein

MIRKGSDSGASNTETLKEFVNKYTMKIALLEDECFRLKRELEECKADKTIYQNEIERWKDLASERLIKMEQLNSQLEERHSQEVESYKAENQHWLSQLNDTQKEHNELRSRLTEQKALYLKQLADKDAHIENLRTVVHGLKTQIMNMQTMLAVNDPSFDLSAIVEIEETSDVMSQTGSDRLEIKFDSTTDIHEEMVKIPGSSTTIWQETIIERLRREKQLAGKQNAILRRQIKALAARERRARLDAQNLKNQVFRISTSGNKVATAETAALHNKIGSLQAQLTSARRDTQTNVALWDKWKRAQQLSERWQAKYEEKCQEIKKVESNLALTKSAVVRLEKEKRVLFARLNELKYNTDLAVEKQEEEPLEKSHKNMADNCTSYTHGVSNVPLLSTQSLMDRIQAQQRRIAALELSEKGNEHLVSEYEKALAEITSLKGQVLKLESTLLESQIKIPLKTCNDEKPELEYWKSYCEMLKEENVQLNLRVNSLETIPTTGHQHRIADLEQTVLTLRGLVGKLQAKQKSAGAVKRTESRPSSGKSASEKNRTQLESYRVEIANLKRSIQDKDLLLERSKEMLKIAAEREDELLRENLLLRRRIDDLIAPKEGFLSA

Uniprot

H9JSF7   A0A437BNC2   A0A2A4J7J6   A0A194PF99   A0A2H1W0J9   A0A2W1BW57   + More
A0A212FGJ7   A0A2J7RQS9   A0A2J7RQT2   A0A195C2U2   E2BSX5   F4WBN9   A0A2A3E2U9   A0A0C9Q4I7   A0A088ADW4   A0A182FCF2   E2AXD3   A0A0J7KQ14   A0A0L7QJN1   E9J8W9   A0A1B0DMH5   A0A232F2J3   K7IQN5  

Pubmed

19121390    26354079    28756777    22118469    20798317    21719571    + More
21282665    28648823    20075255   

EMBL

BABH01027938    BABH01027939    BABH01027940    BABH01027941    RSAL01000027    RVE51932.1    + More
NWSH01002573    PCG67941.1    KQ459606    KPI91374.1    ODYU01005309    SOQ46034.1    KZ149974    PZC75983.1    AGBW02008651    OWR52871.1    NEVH01000618    PNF43190.1    PNF43192.1    KQ978317    KYM95179.1    GL450311    EFN81200.1    GL888066    EGI68317.1    KZ288416    PBC26035.1    GBYB01008988    JAG78755.1    GL443548    EFN61913.1    LBMM01004518    KMQ92334.1    KQ415080    KOC58823.1    GL769162    EFZ10723.1    AJVK01001342    NNAY01001240    OXU24637.1   

Proteomes

UP000005204    UP000283053    UP000218220    UP000053268    UP000007151    UP000235965    + More
UP000078542    UP000008237    UP000007755    UP000242457    UP000005203    UP000069272    UP000000311    UP000036403    UP000053825    UP000092462    UP000215335    UP000002358   

PRIDE

H9JSF7   

Pfam

PF16574   CEP209_CC5

Interpro

IPR026201   Cep290        + More
IPR032321   Cep209_CC5       
IPR001313   Pumilio_RNA-bd_rpt       

ProteinModelPortal

H9JSF7   A0A437BNC2   A0A2A4J7J6   A0A194PF99   A0A2H1W0J9   A0A2W1BW57   + More
A0A212FGJ7   A0A2J7RQS9   A0A2J7RQT2   A0A195C2U2   E2BSX5   F4WBN9   A0A2A3E2U9   A0A0C9Q4I7   A0A088ADW4   A0A182FCF2   E2AXD3   A0A0J7KQ14   A0A0L7QJN1   E9J8W9   A0A1B0DMH5   A0A232F2J3   K7IQN5  

KEGG

101736262    no KO assigned | (RefSeq) centromere-associated protein E-like

GO

GO:0060271   GO:0005634   GO:0005813   GO:0003723  

PANTHER

PTHR18879  

Length:

610

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00074

outside

1  -  610

 

 

Pi

210.250653

Theta

173.766996

Tajima's D

0.652404

CLR

0.009743

CSRT

0.553472326383681

Interpretation

Uncertain