SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05131
Pre Gene Modal
BGIBMGA012465
Annotation
C-Cbl-associated_protein_isoform_A_[Operophtera_brumata]
Location in the cell
Nuclear   Reliability : 4.115
 

Sequence

CDS
ATGCCCGAAAAACCGAAGCGACGTAAAAATAAAAATAAACGTAAAAACAAACACAATCAACAGAATAGTAACGGTGAGAAAAATGCTTGTGAGACTTCAGCAATTGAGAGTTCCCTGAGTGAAAATCAAAACTCTGAAACTAGTACAACTTTGTGTGAAATTGATAATGTTTCTTCGTGCAGCAAAAGCTGCATTAACACAAATTTGTTAAGTCCAAGCAGTGCTGCTGTTCAAGCGATAGAGGTCATCACTCAAGAAGTGAGTGAAGGCGAACAATGCGATTTAATTGAAACAGTGAATGAAAACATATCAGACTTAAATGACAATATTCACGAAATTCAAACTTACATTGTAGAAACTCCGGAACAAAAGAAACCTACACCAAAAATATCGAATTCCGTAAAAAGTAAAAGCCTAGACAATGATGATGATCCTAAAATTGTCGAAATAACCGATGACACACTATTAGTTTCTGAATCATGTAATATACCTATAATCGATTGTAGTAATGTGATTGTTACAGACGTTGACTCAGATGTAGGTTGGGAAAAAATTGATGAATTGAAAACACGTAACCCATTTACCGGAGAAGTTGCGACTGAAAGTATTTCAATAACTACGCTACCTCTTAATGTGGCTCAGTGCGAAAATATAAAATCATTAACTCCTGATCAAGAAGCATCGTTGCGAAATTATTTGAAAACACTTAATCTTTCGACAAGTCCAGATAATCTTAATTCTATAGAAATTAAAACTGAAATCGAACAGATTATAAATCGTGAAGTAAAACACAGATTGCGTAAAAAAGCATCGGCCGATGATAGTTTTCCACAAAAGCTTTGTCCTCCAAGAATGCTAGATGTTATTGATGAAGAAGGTAGTAGTGAATCATCAATGACTTCTCGCCGCCATTCATATTTGAGTGAAAAAAGAAGTGACTTTGAAGATTTAGAAGATGACGTTTTTGAAGATACAAATGCTATAAGAGAGAAATTTGCTGCAAAACCACCAGTAGCCTTACGCAACAAATCATTAGGCCGTCTTGTGTCTCAAGAATGTGTTTTAGTTGATGCCAAAATAAAGGAACCTGAAGTGAGTGAAGCTCGAGGCGACTGGACTATGAAAACTGTTGAAAAATTATCCGGTGCCGAAGTAGTATATTTAACTGATTCGTCAAGCAGTACCAGCTCTATACATGAAATAGAGGAAGAGACAGATGATAGTATCGATACAGATGTTTCTGTGCGTATGATTACACCAACAATCGAAGTAATTGATACTGAACATTTGCTGAAGAAAAACTTTTTATCTTCTGGGCAAAATATATCCGACGACCATAATACTTCTCAATTAGAAAATCAGGATGTAATGGAAAATAAACGTATCAATAATGAACGATTTATTAAAATTGAATTAGAGAAAAATACCACGGAAGACCTCCCTACTACTTCAACCAAAGAAATGCCAGAATCACACGAAATTGTTGTTTTATCAACGGACAACATTAACACAAATCTCTATGTTAAAGAATTAGGCGATGAAATTGAAAAACTTGAGAGTATTTGTAAATCAAGTGGTTCAGAAATTACTAAAAATTTAAATGAGAGTAATGTTACTAAGCGTGACACCAAATTTGATTTGGAAATAAAAGTGATTAAATGTGAATTAAATGATGCTTTCAATAACTTGATAAAAGAAGTTACGTCTGATTCAGAAAGTTCAAATGATTTTCAAAATTGCAAAGAAAATTTTACCAGACAAGATTCTTCGAGTAGCGTTTGTTCTTCACAAAGCACAGCTAAATATAACCCTACGTCTACATCTTTGAATGACATATCTGATTTACATAACGACGAAGCATCTGAGAGTACTGCAAACGATAACATATGTGTTAAGGTCACAGATAAGACACATTCTAATGTATCCAGCCATGTTAATGATGTTATAGAGCATGTTACAGGAGTATCTAAATCTTATTTGACTAATGAAGGTTGTAGCATACAGCATCCGAATACGCTAAGAGAAATTAGTGTAAAGAAAATTGCGTCTTTGCCATATGGAGACAAAATTTTAGAGGAATTAGCCTCCGTTTCGGAACGTTTACAAAATGTCAGTATCAACAAAATGAGTCCTACTAAAAAAACATATAATTCGAAAGATTCTCATTCATCGACGAAGCAAACTACAATTAATGCACCTCCTCCAATAAAGCCTCGCGTTTCTTCGTTAAAAAAGCCACTAGAAAATGAGCATAATGTTGATGTCGCACCAAAATCTGAACCAAAACTATTGTCTATGTCCCCGTCGCAAAAGATGCTAATGGAAAAAACTAATTCGACTGCAACAACGCGTGATAACGTCGGAAGGCGCACTGAACAATATAGTAAAAAAATCACCAATGAGGAATTCAAAATTGATTCTCGGGATGTTTTTCAAAATACAGAACATAATCTTAATACTAATACTCTCACGCCTTTAAAATCACAAACCGGAAGCCGTTTATTAGCTTTAATATGCGACCCGACCATCACCTCAAATGTAAATTCATTAAAAACACGTTGTGACAATAGTTTTACACAGACACAAAATAATCTATCATATCGACAATTGTCGAAAGAAAAAAATGATTTCAAGGCAAGTCATCTTATGCGTGAACTATCTGGTACATTCAAGCCAATTCCGCCTCCTCGACCGAGAAAAATTTCATTAGGATTCTATGAAAGTGATGATAATTCTGATTTTGCTGAAAACTCTCTGCGTTCTATTAAAACTGAGACAAAGAAGTTTCATTTTTCAACTGGCAATTTGAATAAAGAAATTGAGAGCGACATATCTTCCATTCAGAATATGCACAGATTTTATACAAATGTCAGAGATAAAACAATTGATTATGATAAACCTAGAAGACCTTCGTTACCAAAGGATCTATGCGAACAACAAATGGAATACATACGACAGAAAGAGAAAGAGGTAGAAGCAGAAATTCAACGATTGGAGAATCAGTCCAGAATGAAAACACAGAATCTAAGGAAAGGCCCTAGAGCCCCACTGATCTCAGAAAAGGAAACTATTGAAAATGATATAAAGAACGGTGACAAGGTATTGATTTCTCGTAAAAGAGATGTTGTCATGTCGTCACAAGATCTAATAAAAAACAGAAATGATAAAGATAAATTATCGTCGTTATTTAGCAGTAGTCAAGAAGAATTGCAACGTGAAAAAATGTATACTGAATATATGACACAAATGGCAGAAAGAATGGAAAGAAAGCACCATAAGGTTATAAAAATTACTAACACACCCACTTCGATAAGGTCGATATCGAAAAGTATGCCCACACTTGAAAATTTTGATTCAAAGGTCAACAATAAAATTGAAAAAGAATTTATATCAAAGGCTAGGGAAAGATGGGAGAAATTAGGAATTAGGGACCCCGATACGGAAGATGAGCGTGAAGTTAGTAGGAAAGTATTCAAAGAACCTAAAATAATTGAACACAAAATTAAGGTTATCGAAAGTGGTGAAGAAAAGGATGTCCAAAACTTGCCTAGTCATTTGCAAGACTTCATTCATTTTACAATTAAGGACAAGGGCGAAGAAACAAATAGCTCTGGTGAGTCAGAGAATGCACCGGCATCTCCGCACGTTGTGATTTGGTGTGCAGTGTTAATAATAATTATTTCCATCGGAAAGTATTTTATGCGTTTGTTGAGGAATAGTGAATGA
Protein
MPEKPKRRKNKNKRKNKHNQQNSNGEKNACETSAIESSLSENQNSETSTTLCEIDNVSSCSKSCINTNLLSPSSAAVQAIEVITQEVSEGEQCDLIETVNENISDLNDNIHEIQTYIVETPEQKKPTPKISNSVKSKSLDNDDDPKIVEITDDTLLVSESCNIPIIDCSNVIVTDVDSDVGWEKIDELKTRNPFTGEVATESISITTLPLNVAQCENIKSLTPDQEASLRNYLKTLNLSTSPDNLNSIEIKTEIEQIINREVKHRLRKKASADDSFPQKLCPPRMLDVIDEEGSSESSMTSRRHSYLSEKRSDFEDLEDDVFEDTNAIREKFAAKPPVALRNKSLGRLVSQECVLVDAKIKEPEVSEARGDWTMKTVEKLSGAEVVYLTDSSSSTSSIHEIEEETDDSIDTDVSVRMITPTIEVIDTEHLLKKNFLSSGQNISDDHNTSQLENQDVMENKRINNERFIKIELEKNTTEDLPTTSTKEMPESHEIVVLSTDNINTNLYVKELGDEIEKLESICKSSGSEITKNLNESNVTKRDTKFDLEIKVIKCELNDAFNNLIKEVTSDSESSNDFQNCKENFTRQDSSSSVCSSQSTAKYNPTSTSLNDISDLHNDEASESTANDNICVKVTDKTHSNVSSHVNDVIEHVTGVSKSYLTNEGCSIQHPNTLREISVKKIASLPYGDKILEELASVSERLQNVSINKMSPTKKTYNSKDSHSSTKQTTINAPPPIKPRVSSLKKPLENEHNVDVAPKSEPKLLSMSPSQKMLMEKTNSTATTRDNVGRRTEQYSKKITNEEFKIDSRDVFQNTEHNLNTNTLTPLKSQTGSRLLALICDPTITSNVNSLKTRCDNSFTQTQNNLSYRQLSKEKNDFKASHLMRELSGTFKPIPPPRPRKISLGFYESDDNSDFAENSLRSIKTETKKFHFSTGNLNKEIESDISSIQNMHRFYTNVRDKTIDYDKPRRPSLPKDLCEQQMEYIRQKEKEVEAEIQRLENQSRMKTQNLRKGPRAPLISEKETIENDIKNGDKVLISRKRDVVMSSQDLIKNRNDKDKLSSLFSSSQEELQREKMYTEYMTQMAERMERKHHKVIKITNTPTSIRSISKSMPTLENFDSKVNNKIEKEFISKARERWEKLGIRDPDTEDEREVSRKVFKEPKIIEHKIKVIESGEEKDVQNLPSHLQDFIHFTIKDKGEETNSSGESENAPASPHVVIWCAVLIIIISIGKYFMRLLRNSE

Summary

Interpro
IPR002035   VWF_A       

Ontologies

Topology

Length:
1241
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
20.20346
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00002
outside
1  -  1214
TMhelix
1215  -  1237
inside
1238  -  1241
 
 

Population Genetic Test Statistics

Pi
200.617467
Theta
209.661049
Tajima's D
-0.190775
CLR
1.31008
CSRT
0.312834358282086
Interpretation
Uncertain
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