SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO05124
Annotation
PREDICTED:_lipase_3-like_[Papilio_machaon]
Full name
Lipase      
Location in the cell
PlasmaMembrane   Reliability : 2.26
 

Sequence

CDS
ATGCGTGGTGATTCTGACTTGTTCTTGGACTCTCCACAATTAATGGCAAAATATGGATATGCTTCACAAAACCACACTGTCATTACTGAAGATGGATACAAATTAAGTATATTTCGGATACAGAAGACAGGACCTCCAATACTCTTGGTGCACGGAATCGGTGACAGTTCTGATTCCTGGCTGATTTTTGATCGGTCTCATTCGCTAGCTTACCAACTTTCGGATCTCAATTATGATGTGTGGATTTACAATGCAAGAGGAAACAAATACAGTAAAGGACACATAGAAAATATTCCAAGGAAACAGTATTGGGACTTCAGTTATGAAGAAATGGGATCTCAGGATTTGCCCGCCGTTGTTGATCATATACTTTCTACGACGTCTCACACGAAACTATCTTATGTTGGATTCTCTCAAGGAACGACAATATTCTTTGTCATGACCACCATGAAACCGGAATATAACAAAAAAATACAAAACGCATTTTTACTAGCACCTATTACGACAGTAAAGAATATAATACATCCGTTTGTAGACATTTTTACAAATAATATAGATTTTGTGTCGTCTTTTGTGAACGATATTGGTGTTTATGAATTGTTCTCAGATAATGTGTTTTTTAATTTGTATCACGCTAAAGTGTGTCGTGGAGGGGAGTTACAAAACAAGTTGGTTTCAGAGAGGTTACCGGCTCTGGCAAGCCACATACCTGCTGGTGTTTCTACAAAAACATTTTTACATTACTTCCAAAGTTATATAAGTGGACAGTTTCAAAGGTTCGACTACGGTAATACTAAAAATATAATTATGTATAACAGTTCAAAGCCACCGAAATATAATTTAAAATTAGTAGAAGCTCCGTTATATTTATTCGCCAGTGAAACGGACTGGTTTAGTAGAATTGATAATGTAAAAGAAGCGGTATCACAGTTACCAAATGTTGTAAGTTACGTAGTTTTAAATGCTACTTTGGATTTTACACATTTAGAATATGTGTACGGCTCGCGTAATAGTTTGGTTAACGATCGTATAATAAGTATTTTAACGAGTAACGCGTGA
Protein
MRGDSDLFLDSPQLMAKYGYASQNHTVITEDGYKLSIFRIQKTGPPILLVHGIGDSSDSWLIFDRSHSLAYQLSDLNYDVWIYNARGNKYSKGHIENIPRKQYWDFSYEEMGSQDLPAVVDHILSTTSHTKLSYVGFSQGTTIFFVMTTMKPEYNKKIQNAFLLAPITTVKNIIHPFVDIFTNNIDFVSSFVNDIGVYELFSDNVFFNLYHAKVCRGGELQNKLVSERLPALASHIPAGVSTKTFLHYFQSYISGQFQRFDYGNTKNIIMYNSSKPPKYNLKLVEAPLYLFASETDWFSRIDNVKEAVSQLPNVVSYVVLNATLDFTHLEYVYGSRNSLVNDRIISILTSNA

Summary

Similarity
Belongs to the AB hydrolase superfamily. Lipase family.
Feature
chain  Lipase
EMBL
GDQN01011518    JAT79536.1    LADJ01041863    KPJ21385.1    JTDY01003196    KOB69975.1    + More
KQ458729    KPJ05337.1    AGBW02009211    OWR51341.1    ODYU01004246    SOQ43916.1    KZ149971    PZC76037.1    NEVH01011896    PNF31184.1    ODYU01011128    SOQ56675.1    DS231816    EDS37575.1    NEVH01009768    PNF32784.1    LJIG01001091    KRT85849.1    JTDY01001496    KOB73727.1    NWSH01002126    PCG69082.1    KK852794    KDR16428.1    KK853131    KDR10945.1    CH916368    EDW03610.1    JTDY01004649    KOB67911.1    KQ971338    KYB28091.1    PNF31187.1    AGBW02010351    OWR48653.1    ODYU01004598    SOQ44644.1    CP012523    ALC38094.1    CH954177    EDV59018.1    CH902620    EDV32370.2    CH940649    EDW64196.1    CH933807    EDW12736.1    NEVH01021196    PNF20013.1    CM000157    EDW87954.1    GDHF01006507    JAI45807.1    GANO01002781    JAB57090.1    KQS70596.1    KPU73921.1    EDW03611.1    KRF81490.1    CH477866    EAT35486.1    DS231848    EDS36640.1    LJIJ01000666    ODM95481.1    EFA01613.1    CH477320    EAT43642.1    CH963857    EDW76558.1    JRES01000842    KNC27786.1    GEHC01000530    JAV47115.1    KRJ97507.1    GAKP01013224    JAC45728.1    CH478517    EAT32842.1    EDV32371.1    KK852827    KDR15388.1    KZ288449    PBC25599.1    GL764026    EFZ18725.1    GALX01003535    JAB64931.1    NWSH01005689    PCG64055.1    KRF98484.1    AE014134    AY089586    AAF52971.1    AAL90324.1    JXUM01060186    KQ562091    KXJ76718.1    AGB92891.1    ATLV01020990    KE525311    KFB45956.1    KQ460949    KPJ10406.1    NWSH01000119    PCG79374.1    LJIJ01000287    ODM99328.1    GFDL01004643    JAV30402.1    CH480818    EDW52462.1    AXCM01001786    CM002910    KMY89574.1    KQ459596    KPI95464.1    GFDL01004688    JAV30357.1    BT022672    AAF52972.2    AAY55088.1    AGBW02009374    OWR50972.1    CH379061    EAL33105.2    EDW03599.1    EAL33110.2    EDW64189.1    CH479189    EDW25473.1    GFDL01004728    JAV30317.1    OUUW01000006    SPP81772.1    EDW25486.1    BABH01019345    ADV37035.1    EDW64184.1    KRF81481.1    JXUM01060254    KQ562094    KXJ76707.1    ALC38102.1    EDV32387.1    AXCN02000051    EDW12722.1    GFDL01004712    JAV30333.1    KQ460855    KPJ11879.1    SPP81787.1    GEZM01023396    JAV88411.1    GBXI01006321    JAD07971.1   
Pfam
PF00561   Abhydrolase_1        + More
PF04083   Abhydro_lipase
PF12146   Hydrolase_4
Interpro
IPR000073   AB_hydrolase_1        + More
IPR025483   Lipase_euk       
IPR029058   AB_hydrolase       
IPR006693   AB_hydrolase_lipase       
IPR022742   Hydrolase_4       
IPR036322   WD40_repeat_dom_sf       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR001680   WD40_repeat       
IPR011044   Quino_amine_DH_bsu       
IPR017986   WD40_repeat_dom       
SUPFAM
SSF53474   SSF53474        + More
SSF50969   SSF50969       
SSF50978   SSF50978       
Gene 3D
PDB
1K8Q     E-value=5.9343e-44,     Score=446

Ontologies

Topology

Length:
352
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.11766
Exp number, first 60 AAs:
0.0005
Total prob of N-in:
0.00768
outside
1  -  352
 
 

Population Genetic Test Statistics

Pi
263.797988
Theta
215.196768
Tajima's D
0.822311
CLR
0.085448
CSRT
0.610919454027299
Interpretation
Uncertain
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